Experiment: KB with Methyl 6-Hydroxyangolensate 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4315 and Psyr_4316 are separated by 236 nucleotides Psyr_4316 and Psyr_4317 are separated by 74 nucleotides
Psyr_4315: Psyr_4315 - Asparagine synthase, glutamine-hydrolyzing, at 5,164,033 to 5,166,009
_4315
Psyr_4316: Psyr_4316 - conserved hypothetical protein, at 5,166,246 to 5,166,491
_4316
Psyr_4317: Psyr_4317 - Probable taurine catabolism dioxygenase-like protein, at 5,166,566 to 5,167,579
_4317
Position (kb) 5166
5167
5168 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5165.601 kb on + strand, within Psyr_4315 at 5165.602 kb on - strand, within Psyr_4315 at 5165.602 kb on - strand, within Psyr_4315 at 5165.602 kb on - strand, within Psyr_4315 at 5165.602 kb on - strand, within Psyr_4315 at 5165.602 kb on - strand, within Psyr_4315 at 5165.605 kb on + strand, within Psyr_4315 at 5165.628 kb on - strand, within Psyr_4315 at 5165.758 kb on + strand, within Psyr_4315 at 5165.758 kb on + strand, within Psyr_4315 at 5165.768 kb on + strand, within Psyr_4315 at 5165.768 kb on + strand, within Psyr_4315 at 5165.769 kb on - strand, within Psyr_4315 at 5165.769 kb on - strand, within Psyr_4315 at 5165.769 kb on - strand, within Psyr_4315 at 5165.773 kb on - strand, within Psyr_4315 at 5165.773 kb on - strand, within Psyr_4315 at 5165.774 kb on + strand, within Psyr_4315 at 5165.774 kb on + strand, within Psyr_4315 at 5165.774 kb on + strand, within Psyr_4315 at 5165.775 kb on - strand, within Psyr_4315 at 5165.775 kb on - strand, within Psyr_4315 at 5165.775 kb on - strand, within Psyr_4315 at 5165.832 kb on + strand at 5165.833 kb on - strand at 5165.833 kb on - strand at 5165.853 kb on + strand at 5165.854 kb on - strand at 5165.857 kb on + strand at 5165.858 kb on - strand at 5165.887 kb on - strand at 5165.894 kb on + strand at 5165.894 kb on + strand at 5165.895 kb on - strand at 5165.895 kb on - strand at 5165.895 kb on - strand at 5165.895 kb on - strand at 5166.181 kb on - strand at 5166.206 kb on + strand at 5166.207 kb on - strand at 5166.207 kb on - strand at 5166.282 kb on + strand, within Psyr_4316 at 5166.287 kb on + strand, within Psyr_4316 at 5166.321 kb on - strand, within Psyr_4316 at 5166.369 kb on - strand, within Psyr_4316 at 5166.379 kb on + strand, within Psyr_4316 at 5166.430 kb on - strand, within Psyr_4316 at 5166.431 kb on + strand, within Psyr_4316 at 5166.494 kb on - strand at 5166.544 kb on - strand at 5166.563 kb on - strand at 5166.563 kb on - strand at 5166.610 kb on - strand at 5166.656 kb on - strand at 5166.667 kb on - strand at 5166.667 kb on - strand at 5166.670 kb on - strand, within Psyr_4317 at 5166.691 kb on + strand, within Psyr_4317 at 5166.691 kb on + strand, within Psyr_4317 at 5166.805 kb on - strand, within Psyr_4317 at 5166.901 kb on - strand, within Psyr_4317 at 5166.947 kb on + strand, within Psyr_4317 at 5167.045 kb on + strand, within Psyr_4317 at 5167.048 kb on - strand, within Psyr_4317 at 5167.107 kb on + strand, within Psyr_4317 at 5167.108 kb on - strand, within Psyr_4317 at 5167.108 kb on - strand, within Psyr_4317 at 5167.108 kb on - strand, within Psyr_4317 at 5167.109 kb on + strand, within Psyr_4317 at 5167.110 kb on - strand, within Psyr_4317 at 5167.117 kb on + strand, within Psyr_4317 at 5167.118 kb on - strand, within Psyr_4317 at 5167.184 kb on - strand, within Psyr_4317 at 5167.295 kb on - strand, within Psyr_4317 at 5167.358 kb on + strand, within Psyr_4317 at 5167.358 kb on + strand, within Psyr_4317 at 5167.358 kb on + strand, within Psyr_4317 at 5167.358 kb on + strand, within Psyr_4317 at 5167.497 kb on - strand at 5167.603 kb on + strand at 5167.604 kb on - strand at 5167.626 kb on + strand at 5167.627 kb on - strand at 5167.627 kb on - strand at 5167.630 kb on + strand at 5167.674 kb on - strand at 5167.807 kb on + strand at 5167.808 kb on - strand at 5167.808 kb on - strand at 5167.830 kb on + strand at 5167.831 kb on - strand at 5167.872 kb on + strand at 5167.872 kb on + strand at 5167.872 kb on + strand at 5167.872 kb on + strand at 5167.873 kb on - strand at 5167.873 kb on - strand at 5167.873 kb on - strand at 5167.873 kb on - strand at 5167.873 kb on - strand at 5167.873 kb on - strand at 5167.873 kb on - strand at 5167.873 kb on - strand at 5167.919 kb on + strand at 5167.937 kb on + strand at 5167.937 kb on + strand at 5168.009 kb on - strand at 5168.016 kb on + strand at 5168.016 kb on + strand at 5168.016 kb on + strand at 5168.016 kb on + strand at 5168.016 kb on + strand at 5168.017 kb on - strand at 5168.017 kb on - strand at 5168.017 kb on - strand at 5168.065 kb on + strand at 5168.065 kb on + strand at 5168.065 kb on + strand at 5168.066 kb on - strand at 5168.066 kb on - strand at 5168.066 kb on - strand at 5168.066 kb on - strand at 5168.066 kb on - strand at 5168.066 kb on - strand at 5168.066 kb on - strand at 5168.066 kb on - strand at 5168.079 kb on + strand at 5168.156 kb on + strand at 5168.157 kb on - strand at 5168.228 kb on - strand at 5168.228 kb on - strand at 5168.271 kb on + strand at 5168.272 kb on - strand at 5168.272 kb on - strand at 5168.272 kb on - strand at 5168.275 kb on - strand at 5168.302 kb on + strand at 5168.350 kb on + strand at 5168.351 kb on - strand at 5168.405 kb on + strand at 5168.424 kb on + strand at 5168.438 kb on - strand at 5168.472 kb on + strand at 5168.472 kb on + strand at 5168.473 kb on - strand at 5168.473 kb on - strand at 5168.473 kb on - strand at 5168.473 kb on - strand at 5168.473 kb on - strand at 5168.476 kb on + strand at 5168.476 kb on + strand at 5168.477 kb on - strand at 5168.477 kb on - strand at 5168.518 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Methyl 6-Hydroxyangolensate 10 mM remove 5,165,601 + Psyr_4315 0.79 -0.4 5,165,602 - Psyr_4315 0.79 -0.7 5,165,602 - Psyr_4315 0.79 +0.5 5,165,602 - Psyr_4315 0.79 -0.6 5,165,602 - Psyr_4315 0.79 -0.4 5,165,602 - Psyr_4315 0.79 +0.9 5,165,605 + Psyr_4315 0.80 -1.0 5,165,628 - Psyr_4315 0.81 -0.7 5,165,758 + Psyr_4315 0.87 -1.4 5,165,758 + Psyr_4315 0.87 +0.1 5,165,768 + Psyr_4315 0.88 -0.3 5,165,768 + Psyr_4315 0.88 +0.4 5,165,769 - Psyr_4315 0.88 -0.2 5,165,769 - Psyr_4315 0.88 -1.6 5,165,769 - Psyr_4315 0.88 +0.2 5,165,773 - Psyr_4315 0.88 +0.3 5,165,773 - Psyr_4315 0.88 +1.2 5,165,774 + Psyr_4315 0.88 +0.6 5,165,774 + Psyr_4315 0.88 -0.6 5,165,774 + Psyr_4315 0.88 -1.9 5,165,775 - Psyr_4315 0.88 -0.5 5,165,775 - Psyr_4315 0.88 -0.9 5,165,775 - Psyr_4315 0.88 +0.2 5,165,832 + +0.3 5,165,833 - +0.8 5,165,833 - -1.0 5,165,853 + -1.1 5,165,854 - -3.0 5,165,857 + +1.2 5,165,858 - -0.6 5,165,887 - -0.0 5,165,894 + -0.8 5,165,894 + -0.3 5,165,895 - +0.6 5,165,895 - +0.4 5,165,895 - -0.5 5,165,895 - -1.0 5,166,181 - -1.2 5,166,206 + -2.0 5,166,207 - +0.1 5,166,207 - +0.3 5,166,282 + Psyr_4316 0.15 +0.2 5,166,287 + Psyr_4316 0.17 -2.2 5,166,321 - Psyr_4316 0.30 -0.0 5,166,369 - Psyr_4316 0.50 +1.8 5,166,379 + Psyr_4316 0.54 +0.9 5,166,430 - Psyr_4316 0.75 -0.5 5,166,431 + Psyr_4316 0.75 -0.8 5,166,494 - -1.0 5,166,544 - +1.2 5,166,563 - -2.3 5,166,563 - +1.2 5,166,610 - -0.3 5,166,656 - -0.4 5,166,667 - +0.8 5,166,667 - +0.9 5,166,670 - Psyr_4317 0.10 +0.3 5,166,691 + Psyr_4317 0.12 -0.8 5,166,691 + Psyr_4317 0.12 -1.0 5,166,805 - Psyr_4317 0.24 -1.2 5,166,901 - Psyr_4317 0.33 +0.5 5,166,947 + Psyr_4317 0.38 +0.2 5,167,045 + Psyr_4317 0.47 -0.3 5,167,048 - Psyr_4317 0.48 -0.5 5,167,107 + Psyr_4317 0.53 +0.2 5,167,108 - Psyr_4317 0.53 -0.5 5,167,108 - Psyr_4317 0.53 -0.6 5,167,108 - Psyr_4317 0.53 -0.2 5,167,109 + Psyr_4317 0.54 -0.8 5,167,110 - Psyr_4317 0.54 -0.6 5,167,117 + Psyr_4317 0.54 -0.4 5,167,118 - Psyr_4317 0.54 -0.4 5,167,184 - Psyr_4317 0.61 -0.7 5,167,295 - Psyr_4317 0.72 -0.8 5,167,358 + Psyr_4317 0.78 -2.3 5,167,358 + Psyr_4317 0.78 +2.2 5,167,358 + Psyr_4317 0.78 -0.2 5,167,358 + Psyr_4317 0.78 -0.3 5,167,497 - -0.1 5,167,603 + -0.5 5,167,604 - -0.2 5,167,626 + -1.2 5,167,627 - +1.6 5,167,627 - -1.7 5,167,630 + -1.6 5,167,674 - -0.8 5,167,807 + -1.9 5,167,808 - +0.7 5,167,808 - -0.5 5,167,830 + +0.8 5,167,831 - +0.1 5,167,872 + -1.7 5,167,872 + -0.2 5,167,872 + -1.1 5,167,872 + -0.8 5,167,873 - -0.3 5,167,873 - +0.2 5,167,873 - -0.2 5,167,873 - +0.8 5,167,873 - -0.8 5,167,873 - +0.6 5,167,873 - -0.7 5,167,873 - +0.6 5,167,919 + +0.6 5,167,937 + -0.3 5,167,937 + -0.6 5,168,009 - +0.3 5,168,016 + -0.6 5,168,016 + +0.0 5,168,016 + +0.8 5,168,016 + -0.4 5,168,016 + +0.4 5,168,017 - +0.0 5,168,017 - +0.5 5,168,017 - +0.2 5,168,065 + -0.4 5,168,065 + -1.3 5,168,065 + +0.8 5,168,066 - +0.8 5,168,066 - +0.2 5,168,066 - -1.2 5,168,066 - +0.9 5,168,066 - +0.5 5,168,066 - +2.2 5,168,066 - +1.4 5,168,066 - -0.8 5,168,079 + -1.2 5,168,156 + -1.3 5,168,157 - +0.9 5,168,228 - +0.2 5,168,228 - +0.8 5,168,271 + -0.2 5,168,272 - +0.5 5,168,272 - -0.1 5,168,272 - -0.7 5,168,275 - -0.3 5,168,302 + +0.9 5,168,350 + -0.8 5,168,351 - -0.1 5,168,405 + +0.1 5,168,424 + +0.6 5,168,438 - +0.2 5,168,472 + -0.0 5,168,472 + +0.2 5,168,473 - -0.2 5,168,473 - -0.2 5,168,473 - -0.4 5,168,473 - +0.1 5,168,473 - +0.4 5,168,476 + +0.2 5,168,476 + -1.1 5,168,477 - +0.0 5,168,477 - -0.4 5,168,518 + -0.1
Or see this region's nucleotide sequence