Experiment: KB with Chrysin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4724 and Psyr_4725 are separated by 163 nucleotides Psyr_4725 and Psyr_4726 are separated by 190 nucleotides Psyr_4726 and Psyr_4727 are separated by 70 nucleotides Psyr_4727 and Psyr_4728 are separated by 69 nucleotides Psyr_4728 and Psyr_4729 overlap by 4 nucleotides
Psyr_4724: Psyr_4724 - Phospholipid/glycerol acyltransferase, at 5,602,632 to 5,603,555
_4724
Psyr_4725: Psyr_4725 - Protein of unknown function DUF785, at 5,603,719 to 5,604,222
_4725
Psyr_4726: Psyr_4726 - hypothetical protein, at 5,604,413 to 5,605,573
_4726
Psyr_4727: Psyr_4727 - glutathione S-transferase, putative, at 5,605,644 to 5,606,273
_4727
Psyr_4728: Psyr_4728 - conserved hypothetical protein, at 5,606,343 to 5,606,525
_4728
Psyr_4729: Psyr_4729 - PepSY-associated TM helix, at 5,606,522 to 5,607,655
_4729
Position (kb) 5604
5605
5606 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5603.475 kb on - strand at 5603.475 kb on - strand at 5603.475 kb on - strand at 5603.485 kb on - strand at 5603.556 kb on + strand at 5603.556 kb on + strand at 5603.557 kb on - strand at 5603.560 kb on - strand at 5603.560 kb on - strand at 5603.585 kb on + strand at 5603.585 kb on + strand at 5603.586 kb on - strand at 5603.586 kb on - strand at 5603.586 kb on - strand at 5603.593 kb on + strand at 5603.593 kb on + strand at 5603.593 kb on + strand at 5603.593 kb on + strand at 5603.593 kb on + strand at 5603.593 kb on + strand at 5603.594 kb on - strand at 5603.594 kb on - strand at 5603.594 kb on - strand at 5603.594 kb on - strand at 5603.597 kb on + strand at 5603.598 kb on - strand at 5603.622 kb on + strand at 5603.623 kb on - strand at 5603.639 kb on + strand at 5603.639 kb on + strand at 5603.639 kb on + strand at 5603.639 kb on + strand at 5603.640 kb on - strand at 5603.640 kb on - strand at 5603.640 kb on - strand at 5603.640 kb on - strand at 5603.653 kb on + strand at 5603.671 kb on + strand at 5603.671 kb on + strand at 5603.700 kb on - strand at 5603.738 kb on + strand at 5603.785 kb on + strand, within Psyr_4725 at 5603.785 kb on + strand, within Psyr_4725 at 5603.785 kb on + strand, within Psyr_4725 at 5603.785 kb on + strand, within Psyr_4725 at 5603.785 kb on + strand, within Psyr_4725 at 5603.785 kb on + strand, within Psyr_4725 at 5603.785 kb on + strand, within Psyr_4725 at 5603.786 kb on - strand, within Psyr_4725 at 5603.786 kb on - strand, within Psyr_4725 at 5603.786 kb on - strand, within Psyr_4725 at 5603.786 kb on - strand, within Psyr_4725 at 5603.786 kb on - strand, within Psyr_4725 at 5603.919 kb on - strand, within Psyr_4725 at 5603.959 kb on + strand, within Psyr_4725 at 5603.959 kb on + strand, within Psyr_4725 at 5603.959 kb on + strand, within Psyr_4725 at 5603.959 kb on + strand, within Psyr_4725 at 5603.959 kb on + strand, within Psyr_4725 at 5603.960 kb on - strand, within Psyr_4725 at 5603.960 kb on - strand, within Psyr_4725 at 5603.960 kb on - strand, within Psyr_4725 at 5603.960 kb on - strand, within Psyr_4725 at 5603.960 kb on - strand, within Psyr_4725 at 5603.960 kb on - strand, within Psyr_4725 at 5604.091 kb on - strand, within Psyr_4725 at 5604.091 kb on - strand, within Psyr_4725 at 5604.091 kb on - strand, within Psyr_4725 at 5604.197 kb on - strand at 5604.198 kb on + strand at 5604.199 kb on - strand at 5604.232 kb on + strand at 5604.232 kb on + strand at 5605.137 kb on + strand, within Psyr_4726 at 5605.269 kb on - strand, within Psyr_4726 at 5605.717 kb on + strand, within Psyr_4727 at 5605.837 kb on + strand, within Psyr_4727 at 5605.837 kb on + strand, within Psyr_4727 at 5605.837 kb on + strand, within Psyr_4727 at 5605.838 kb on - strand, within Psyr_4727 at 5605.838 kb on - strand, within Psyr_4727 at 5605.838 kb on - strand, within Psyr_4727 at 5606.041 kb on + strand, within Psyr_4727 at 5606.042 kb on - strand, within Psyr_4727 at 5606.158 kb on - strand, within Psyr_4727 at 5606.248 kb on + strand at 5606.248 kb on + strand at 5606.248 kb on + strand at 5606.248 kb on + strand at 5606.248 kb on + strand at 5606.249 kb on - strand at 5606.249 kb on - strand at 5606.249 kb on - strand at 5606.277 kb on + strand at 5606.301 kb on + strand at 5606.301 kb on + strand at 5606.301 kb on + strand at 5606.301 kb on + strand at 5606.301 kb on + strand at 5606.302 kb on - strand at 5606.302 kb on - strand at 5606.302 kb on - strand at 5606.302 kb on - strand at 5606.306 kb on + strand at 5606.306 kb on + strand at 5606.307 kb on - strand at 5606.372 kb on + strand, within Psyr_4728
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Chrysin 10 mM remove 5,603,475 - -0.3 5,603,475 - +0.2 5,603,475 - -0.0 5,603,485 - -0.4 5,603,556 + +0.2 5,603,556 + -1.1 5,603,557 - -0.4 5,603,560 - +0.1 5,603,560 - -0.1 5,603,585 + -0.4 5,603,585 + -0.4 5,603,586 - +0.1 5,603,586 - +0.0 5,603,586 - +0.3 5,603,593 + -0.9 5,603,593 + +0.4 5,603,593 + -0.8 5,603,593 + -0.4 5,603,593 + +0.8 5,603,593 + +0.5 5,603,594 - -0.6 5,603,594 - +1.6 5,603,594 - +0.3 5,603,594 - -1.0 5,603,597 + -0.6 5,603,598 - -0.7 5,603,622 + +0.0 5,603,623 - +0.0 5,603,639 + +0.2 5,603,639 + +0.2 5,603,639 + -1.3 5,603,639 + -0.1 5,603,640 - +0.1 5,603,640 - -0.4 5,603,640 - -0.6 5,603,640 - -0.0 5,603,653 + -0.8 5,603,671 + -0.2 5,603,671 + -1.0 5,603,700 - -1.2 5,603,738 + -0.3 5,603,785 + Psyr_4725 0.13 +1.1 5,603,785 + Psyr_4725 0.13 -0.0 5,603,785 + Psyr_4725 0.13 +0.3 5,603,785 + Psyr_4725 0.13 +0.6 5,603,785 + Psyr_4725 0.13 -0.2 5,603,785 + Psyr_4725 0.13 -1.3 5,603,785 + Psyr_4725 0.13 +0.4 5,603,786 - Psyr_4725 0.13 -0.6 5,603,786 - Psyr_4725 0.13 +0.4 5,603,786 - Psyr_4725 0.13 -0.3 5,603,786 - Psyr_4725 0.13 +0.0 5,603,786 - Psyr_4725 0.13 +0.7 5,603,919 - Psyr_4725 0.40 -1.1 5,603,959 + Psyr_4725 0.48 +0.1 5,603,959 + Psyr_4725 0.48 +0.4 5,603,959 + Psyr_4725 0.48 -0.9 5,603,959 + Psyr_4725 0.48 -1.5 5,603,959 + Psyr_4725 0.48 -0.4 5,603,960 - Psyr_4725 0.48 -0.8 5,603,960 - Psyr_4725 0.48 +0.4 5,603,960 - Psyr_4725 0.48 +0.3 5,603,960 - Psyr_4725 0.48 -0.3 5,603,960 - Psyr_4725 0.48 -0.9 5,603,960 - Psyr_4725 0.48 -0.1 5,604,091 - Psyr_4725 0.74 -1.0 5,604,091 - Psyr_4725 0.74 -0.4 5,604,091 - Psyr_4725 0.74 -0.9 5,604,197 - +1.9 5,604,198 + -0.3 5,604,199 - -3.3 5,604,232 + -0.3 5,604,232 + -0.1 5,605,137 + Psyr_4726 0.62 -0.9 5,605,269 - Psyr_4726 0.74 +1.3 5,605,717 + Psyr_4727 0.12 -3.0 5,605,837 + Psyr_4727 0.31 -0.1 5,605,837 + Psyr_4727 0.31 -0.1 5,605,837 + Psyr_4727 0.31 -0.0 5,605,838 - Psyr_4727 0.31 -0.4 5,605,838 - Psyr_4727 0.31 +0.1 5,605,838 - Psyr_4727 0.31 -0.3 5,606,041 + Psyr_4727 0.63 -0.6 5,606,042 - Psyr_4727 0.63 -0.1 5,606,158 - Psyr_4727 0.82 -0.7 5,606,248 + +0.2 5,606,248 + -1.3 5,606,248 + +1.7 5,606,248 + -0.4 5,606,248 + -0.7 5,606,249 - +0.9 5,606,249 - -0.8 5,606,249 - -0.4 5,606,277 + -0.7 5,606,301 + -0.4 5,606,301 + -0.7 5,606,301 + -0.9 5,606,301 + -0.1 5,606,301 + -0.9 5,606,302 - -0.7 5,606,302 - +0.8 5,606,302 - -0.4 5,606,302 - -0.4 5,606,306 + -1.3 5,606,306 + -0.1 5,606,307 - +0.1 5,606,372 + Psyr_4728 0.16 -0.2
Or see this region's nucleotide sequence