Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0930

Experiment: KB with Chrysin 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Chrysin 10 mM
1,060,176	+		Psyr_0929	0.59	-0.5
1,060,176	+		Psyr_0929	0.59	+0.6
1,060,176	+		Psyr_0929	0.59	-0.7
1,060,177	-		Psyr_0929	0.59	+0.4
1,060,177	-		Psyr_0929	0.59	+0.7
1,060,177	-		Psyr_0929	0.59	+0.1
1,060,378	+		Psyr_0929	0.67	-0.4
1,060,379	-		Psyr_0929	0.67	-0.7
1,060,541	+		Psyr_0929	0.74	+0.3
1,060,542	-		Psyr_0929	0.74	-0.0
1,060,571	+		Psyr_0929	0.75	+0.2
1,060,640	-		Psyr_0929	0.78	+0.1
1,060,824	+		Psyr_0929	0.86	+0.2
1,060,825	-		Psyr_0929	0.86	-2.0
1,060,890	-		Psyr_0929	0.89	-1.2
1,060,909	-		Psyr_0929	0.90	+0.5
1,060,909	-		Psyr_0929	0.90	-0.1
1,060,914	+		Psyr_0929	0.90	+0.6
1,060,914	+		Psyr_0929	0.90	+0.9
1,060,914	+		Psyr_0929	0.90	-2.0
1,060,914	+		Psyr_0929	0.90	-1.6
1,060,914	+		Psyr_0929	0.90	-1.8
1,060,915	-		Psyr_0929	0.90	+0.6
1,060,915	-		Psyr_0929	0.90	+0.4
1,060,915	-		Psyr_0929	0.90	-0.8
1,061,002	+				+0.2
1,061,002	+				-0.1
1,061,002	+				+0.7
1,061,002	+				+0.2
1,061,002	+				-0.1
1,061,002	+				+0.0
1,061,003	-				+0.4
1,061,003	-				-0.4
1,061,003	-				-0.8
1,061,003	-				-1.1
1,061,003	-				-0.2
1,061,003	-				-0.4
1,061,177	-				-2.4
1,061,177	-				+1.0
1,061,235	+				+1.2
1,061,235	+				+0.0
1,061,235	+				+0.2
1,061,236	-				-0.1
1,061,435	+		Psyr_0930	0.11	-0.8
1,061,537	+		Psyr_0930	0.15	-0.1
1,061,791	-		Psyr_0930	0.26	-0.9
1,061,791	-		Psyr_0930	0.26	-0.7
1,061,791	-		Psyr_0930	0.26	-0.1
1,061,819	+		Psyr_0930	0.27	-0.8
1,061,819	+		Psyr_0930	0.27	+0.9
1,061,819	+		Psyr_0930	0.27	+0.6
1,061,819	+		Psyr_0930	0.27	+0.9
1,061,819	+		Psyr_0930	0.27	+0.1
1,061,820	-		Psyr_0930	0.27	-1.5
1,061,820	-		Psyr_0930	0.27	-1.6
1,061,943	-		Psyr_0930	0.32	-0.5
1,061,943	-		Psyr_0930	0.32	-0.1
1,061,943	-		Psyr_0930	0.32	-0.6
1,061,974	+		Psyr_0930	0.33	-0.2
1,062,131	-		Psyr_0930	0.39	-1.4
1,062,264	+		Psyr_0930	0.45	+0.6
1,062,265	-		Psyr_0930	0.45	-1.5
1,062,295	-		Psyr_0930	0.46	+0.2
1,062,327	+		Psyr_0930	0.47	-2.3
1,062,327	+		Psyr_0930	0.47	+0.3
1,062,327	+		Psyr_0930	0.47	-0.3
1,062,327	+		Psyr_0930	0.47	+1.0
1,062,328	-		Psyr_0930	0.47	+0.4
1,062,328	-		Psyr_0930	0.47	+0.7
1,062,328	-		Psyr_0930	0.47	-0.9
1,062,328	-		Psyr_0930	0.47	+0.0
1,062,328	-		Psyr_0930	0.47	+0.6
1,062,328	-		Psyr_0930	0.47	+0.2
1,062,328	-		Psyr_0930	0.47	+0.1
1,062,511	-		Psyr_0930	0.55	+0.4
1,062,511	-		Psyr_0930	0.55	-0.8
1,062,511	-		Psyr_0930	0.55	+0.1
1,062,655	+		Psyr_0930	0.60	-0.5
1,062,656	-		Psyr_0930	0.60	-0.6
1,062,656	-		Psyr_0930	0.60	-1.1
1,062,656	-		Psyr_0930	0.60	-1.1
1,062,811	-		Psyr_0930	0.67	-0.7
1,062,824	+		Psyr_0930	0.67	-1.0
1,062,824	+		Psyr_0930	0.67	+0.4
1,062,824	+		Psyr_0930	0.67	+1.2
1,062,824	+		Psyr_0930	0.67	-1.4
1,062,824	+		Psyr_0930	0.67	+0.0
1,062,824	+		Psyr_0930	0.67	-0.1
1,062,824	+		Psyr_0930	0.67	+0.2
1,062,824	+		Psyr_0930	0.67	-1.3
1,062,825	-		Psyr_0930	0.67	-1.3
1,062,825	-		Psyr_0930	0.67	-0.2
1,062,825	-		Psyr_0930	0.67	+0.2
1,062,825	-		Psyr_0930	0.67	-1.5
1,062,825	-		Psyr_0930	0.67	-0.6
1,062,825	-		Psyr_0930	0.67	-0.7
1,062,825	-		Psyr_0930	0.67	+0.6
1,062,825	-		Psyr_0930	0.67	-1.0
1,062,938	+		Psyr_0930	0.72	+0.4
1,062,938	+		Psyr_0930	0.72	-0.0
1,062,938	+		Psyr_0930	0.72	-0.8
1,062,938	+		Psyr_0930	0.72	-1.1
1,062,938	+		Psyr_0930	0.72	+0.7
1,062,938	+		Psyr_0930	0.72	+1.1
1,062,938	+		Psyr_0930	0.72	-0.3
1,062,938	+		Psyr_0930	0.72	-0.4
1,062,938	+		Psyr_0930	0.72	-0.6
1,062,938	+		Psyr_0930	0.72	-0.6
1,062,938	+		Psyr_0930	0.72	+0.0
1,062,939	-		Psyr_0930	0.72	-1.0
1,062,939	-		Psyr_0930	0.72	+0.6
1,062,939	-		Psyr_0930	0.72	-0.3
1,062,939	-		Psyr_0930	0.72	+0.3
1,062,939	-		Psyr_0930	0.72	-1.3
1,062,939	-		Psyr_0930	0.72	-0.4
1,062,939	-		Psyr_0930	0.72	+0.9
1,062,939	-		Psyr_0930	0.72	-1.0
1,062,939	-		Psyr_0930	0.72	-2.1
1,062,939	-		Psyr_0930	0.72	+0.0
1,062,939	-		Psyr_0930	0.72	-0.9
1,062,939	-		Psyr_0930	0.72	+0.4
1,062,939	-		Psyr_0930	0.72	-0.7
1,062,939	-		Psyr_0930	0.72	-0.2
1,062,939	-		Psyr_0930	0.72	-0.2
1,062,939	-		Psyr_0930	0.72	-0.1
1,062,939	-		Psyr_0930	0.72	+0.1
1,062,939	-		Psyr_0930	0.72	-0.6
1,062,939	-		Psyr_0930	0.72	+0.0
1,062,939	-		Psyr_0930	0.72	+2.2
1,062,939	-		Psyr_0930	0.72	+0.4
1,062,939	-		Psyr_0930	0.72	-0.0
1,062,939	-		Psyr_0930	0.72	-1.1
1,062,939	-		Psyr_0930	0.72	-1.4
1,063,223	-		Psyr_0930	0.83	+0.0
1,063,339	+		Psyr_0930	0.88	+1.2
1,063,340	-		Psyr_0930	0.88	+0.2
1,063,340	-		Psyr_0930	0.88	-0.1
1,063,347	+		Psyr_0930	0.88	+0.4
1,063,347	+		Psyr_0930	0.88	+0.6
1,063,347	+		Psyr_0930	0.88	+2.0
1,063,347	+		Psyr_0930	0.88	+1.2
1,063,348	-		Psyr_0930	0.88	-1.7
1,063,449	+				-0.0
1,063,449	+				-0.7
1,063,450	-				+0.9
1,063,453	+				+0.3
1,063,453	+				+0.1
1,063,454	-				-0.1
1,063,454	-				+1.6
1,063,454	-				+0.3
1,063,597	+				-0.8
1,063,597	+				-0.5
1,063,639	+				-0.6
1,063,639	+				-0.7
1,063,639	+				+1.5
1,063,639	+				-0.1
1,063,639	+				-0.4
1,063,639	+				-0.4
1,063,639	+				-0.4
1,063,639	+				+0.7
1,063,639	+				+0.6
1,063,640	-				+0.7
1,063,640	-				-0.3
1,063,640	-				-0.5
1,063,640	-				+0.5
1,063,640	-				+1.1
1,063,640	-				-1.6
1,063,640	-				+0.0
1,063,640	-				+0.1
1,063,640	-				-0.7
1,063,702	-				+0.4
1,063,726	+				-0.9
1,063,727	-				-0.6
1,063,727	-				+0.1
1,063,734	-				-2.3
1,063,734	-				+0.9
1,063,747	+				-0.3
1,063,748	-				-1.8
1,063,751	+				-0.4
1,063,751	+				+0.0
1,063,751	+				+0.2
1,063,751	+				-0.9
1,063,752	-				-1.4
1,063,752	-				-0.4
1,063,752	-				+0.6
1,063,752	-				-2.1
1,063,785	+				-0.2
1,063,785	+				-0.8
1,063,785	+				+0.0
1,063,786	-				+0.2
1,063,786	-				+0.2
1,063,810	+				+0.8
1,063,810	+				-0.0
1,063,810	+				-0.3
1,063,810	+				+2.8
1,063,811	-				-0.6
1,063,811	-				+0.1
1,063,811	-				-0.7
1,063,811	-				+1.4
1,063,811	-				+1.4
1,063,935	+		Psyr_0931	0.13	-0.1
1,063,981	+		Psyr_0931	0.16	+0.6
1,063,981	+		Psyr_0931	0.16	-1.4
1,063,982	-		Psyr_0931	0.16	+1.1
1,063,982	-		Psyr_0931	0.16	+0.2
1,063,982	-		Psyr_0931	0.16	-0.5
1,063,982	-		Psyr_0931	0.16	+0.4
1,064,026	-		Psyr_0931	0.19	-0.1
1,064,069	+		Psyr_0931	0.22	-0.4
1,064,069	+		Psyr_0931	0.22	+1.4
1,064,069	+		Psyr_0931	0.22	-0.1
1,064,070	-		Psyr_0931	0.22	+1.5
1,064,070	-		Psyr_0931	0.22	+0.6
1,064,167	-		Psyr_0931	0.29	+0.5
1,064,171	-		Psyr_0931	0.29	+1.1
1,064,171	-		Psyr_0931	0.29	-0.4
1,064,231	+		Psyr_0931	0.33	-0.3
1,064,231	+		Psyr_0931	0.33	-0.6
1,064,231	+		Psyr_0931	0.33	-0.5
1,064,231	+		Psyr_0931	0.33	-0.1
1,064,231	+		Psyr_0931	0.33	-0.2
1,064,231	+		Psyr_0931	0.33	+0.4
1,064,232	-		Psyr_0931	0.33	-0.3
1,064,232	-		Psyr_0931	0.33	-1.5
1,064,232	-		Psyr_0931	0.33	+0.6
1,064,238	+		Psyr_0931	0.34	+0.1
1,064,239	-		Psyr_0931	0.34	+0.5
1,064,245	-		Psyr_0931	0.34	-0.4
1,064,262	+		Psyr_0931	0.35	-0.6
1,064,263	-		Psyr_0931	0.35	+0.0
1,064,292	+		Psyr_0931	0.37	-1.1
1,064,292	+		Psyr_0931	0.37	-0.7
1,064,292	+		Psyr_0931	0.37	-0.4
1,064,293	-		Psyr_0931	0.37	+1.1
1,064,293	-		Psyr_0931	0.37	+0.2
1,064,293	-				+1.2
1,064,293	-		Psyr_0931	0.37	+1.2
1,064,293	-		Psyr_0931	0.37	-0.3
1,064,403	+		Psyr_0931	0.45	-0.8
1,064,404	-		Psyr_0931	0.45	+0.8
1,064,413	-		Psyr_0931	0.46	+1.2
1,064,451	+		Psyr_0931	0.48	+0.6
1,064,451	+		Psyr_0931	0.48	+0.8
1,064,452	-		Psyr_0931	0.48	-0.9
1,064,452	-		Psyr_0931	0.48	+0.9
1,064,452	-		Psyr_0931	0.48	+0.2
1,064,452	-		Psyr_0931	0.48	-1.6
1,064,454	+		Psyr_0931	0.48	-0.8
1,064,454	+		Psyr_0931	0.48	-0.4
1,064,454	+		Psyr_0931	0.48	-0.4
1,064,454	+		Psyr_0931	0.48	-0.2
1,064,454	+		Psyr_0931	0.48	+0.8
1,064,454	+		Psyr_0931	0.48	-0.7
1,064,454	+		Psyr_0931	0.48	-0.1
1,064,455	-		Psyr_0931	0.48	+0.2
1,064,455	-		Psyr_0931	0.48	-1.6
1,064,455	-		Psyr_0931	0.48	+1.3
1,064,455	-		Psyr_0931	0.48	-1.1
1,064,455	-		Psyr_0931	0.48	+0.5
1,064,455	-		Psyr_0931	0.48	-1.5
1,064,549	+		Psyr_0931	0.55	+0.2
1,064,549	+		Psyr_0931	0.55	+0.1
1,064,549	+		Psyr_0931	0.55	+0.9
1,064,549	+		Psyr_0931	0.55	+0.8
1,064,549	+		Psyr_0931	0.55	+1.7
1,064,549	+		Psyr_0931	0.55	+0.1
1,064,549	+		Psyr_0931	0.55	+0.2
1,064,549	+		Psyr_0931	0.55	-0.5
1,064,550	-		Psyr_0931	0.55	-1.0
1,064,550	-		Psyr_0931	0.55	-0.7
1,064,550	-		Psyr_0931	0.55	+1.7
1,064,550	-		Psyr_0931	0.55	+0.6
1,064,550	-		Psyr_0931	0.55	-0.0
1,064,550	-		Psyr_0931	0.55	+0.8
1,064,553	+		Psyr_0931	0.55	+0.4
1,064,553	+		Psyr_0931	0.55	-0.4
1,064,553	+		Psyr_0931	0.55	-1.2
1,064,554	-		Psyr_0931	0.55	+0.1
1,064,554	-		Psyr_0931	0.55	+0.1
1,064,575	+		Psyr_0931	0.57	+0.1
1,064,575	+		Psyr_0931	0.57	-0.9
1,064,575	+		Psyr_0931	0.57	+1.2
1,064,575	+		Psyr_0931	0.57	-1.7
1,064,576	-		Psyr_0931	0.57	+0.4
1,064,576	-		Psyr_0931	0.57	+0.1
1,064,576	-		Psyr_0931	0.57	+0.5
1,064,576	-		Psyr_0931	0.57	+2.9