Experiment: Ferric citrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO4176 and SO4177 are separated by 1 nucleotides SO4177 and SO4178 are separated by 181 nucleotides
SO4176: SO4176 - conserved hypothetical protein (NCBI ptt file), at 4,347,715 to 4,349,448
SO4176
SO4177: SO4177 - hypothetical protein (NCBI ptt file), at 4,349,450 to 4,349,806
SO4177
SO4178: SO4178 - conserved hypothetical protein (NCBI ptt file), at 4,349,988 to 4,351,043
SO4178
Position (kb) 4349
4350 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 4348.457 kb on + strand, within SO4176 at 4348.464 kb on + strand, within SO4176 at 4348.488 kb on - strand, within SO4176 at 4348.576 kb on - strand, within SO4176 at 4348.752 kb on + strand, within SO4176 at 4348.752 kb on + strand, within SO4176 at 4348.790 kb on - strand, within SO4176 at 4348.791 kb on - strand, within SO4176 at 4348.803 kb on - strand, within SO4176 at 4348.837 kb on + strand, within SO4176 at 4348.851 kb on + strand, within SO4176 at 4348.861 kb on + strand, within SO4176 at 4348.869 kb on - strand, within SO4176 at 4349.029 kb on + strand, within SO4176 at 4349.066 kb on + strand, within SO4176 at 4349.084 kb on - strand, within SO4176 at 4349.105 kb on + strand, within SO4176 at 4349.134 kb on - strand, within SO4176 at 4349.223 kb on + strand, within SO4176 at 4349.319 kb on + strand at 4349.325 kb on + strand at 4349.438 kb on + strand at 4349.451 kb on + strand at 4349.490 kb on - strand, within SO4177 at 4349.497 kb on + strand, within SO4177 at 4349.556 kb on + strand, within SO4177 at 4349.563 kb on - strand, within SO4177 at 4349.604 kb on + strand, within SO4177 at 4349.622 kb on + strand at 4349.622 kb on + strand, within SO4177 at 4349.622 kb on + strand, within SO4177 at 4349.708 kb on + strand, within SO4177 at 4349.868 kb on + strand at 4349.898 kb on - strand at 4349.911 kb on + strand at 4349.998 kb on - strand at 4350.034 kb on + strand at 4350.039 kb on + strand at 4350.140 kb on + strand, within SO4178 at 4350.157 kb on - strand, within SO4178 at 4350.157 kb on - strand, within SO4178 at 4350.200 kb on - strand, within SO4178 at 4350.226 kb on + strand, within SO4178 at 4350.275 kb on - strand, within SO4178 at 4350.281 kb on - strand, within SO4178 at 4350.281 kb on - strand, within SO4178 at 4350.281 kb on - strand, within SO4178 at 4350.281 kb on - strand, within SO4178 at 4350.281 kb on - strand, within SO4178 at 4350.281 kb on - strand, within SO4178 at 4350.305 kb on - strand, within SO4178 at 4350.337 kb on + strand, within SO4178 at 4350.345 kb on - strand, within SO4178 at 4350.354 kb on - strand, within SO4178 at 4350.392 kb on - strand, within SO4178 at 4350.424 kb on + strand, within SO4178 at 4350.553 kb on + strand, within SO4178 at 4350.599 kb on + strand, within SO4178 at 4350.622 kb on + strand, within SO4178 at 4350.739 kb on + strand, within SO4178 at 4350.741 kb on + strand, within SO4178
Per-strain Table
Position Strand Gene LocusTag Fraction Ferric citrate electron acceptor remove 4,348,457 + SO4176 0.43 -0.5 4,348,464 + SO4176 0.43 +2.0 4,348,488 - SO4176 0.45 +0.7 4,348,576 - SO4176 0.50 +0.1 4,348,752 + SO4176 0.60 -0.1 4,348,752 + SO4176 0.60 +1.2 4,348,790 - SO4176 0.62 +0.4 4,348,791 - SO4176 0.62 +0.8 4,348,803 - SO4176 0.63 -1.4 4,348,837 + SO4176 0.65 -0.5 4,348,851 + SO4176 0.66 -0.8 4,348,861 + SO4176 0.66 -2.3 4,348,869 - SO4176 0.67 +0.9 4,349,029 + SO4176 0.76 +1.0 4,349,066 + SO4176 0.78 +0.6 4,349,084 - SO4176 0.79 -0.1 4,349,105 + SO4176 0.80 +0.9 4,349,134 - SO4176 0.82 -0.0 4,349,223 + SO4176 0.87 +0.8 4,349,319 + +0.2 4,349,325 + +0.6 4,349,438 + -0.8 4,349,451 + +0.9 4,349,490 - SO4177 0.11 +1.6 4,349,497 + SO4177 0.13 -2.1 4,349,556 + SO4177 0.30 +0.1 4,349,563 - SO4177 0.32 +1.4 4,349,604 + SO4177 0.43 +2.3 4,349,622 + +1.1 4,349,622 + SO4177 0.48 -0.3 4,349,622 + SO4177 0.48 -0.1 4,349,708 + SO4177 0.72 -0.2 4,349,868 + -0.0 4,349,898 - -0.6 4,349,911 + -0.5 4,349,998 - +3.5 4,350,034 + -0.7 4,350,039 + +0.6 4,350,140 + SO4178 0.14 +0.2 4,350,157 - SO4178 0.16 +0.5 4,350,157 - SO4178 0.16 -0.1 4,350,200 - SO4178 0.20 +1.7 4,350,226 + SO4178 0.23 -3.5 4,350,275 - SO4178 0.27 -0.5 4,350,281 - SO4178 0.28 -4.1 4,350,281 - SO4178 0.28 -1.1 4,350,281 - SO4178 0.28 +0.2 4,350,281 - SO4178 0.28 -0.8 4,350,281 - SO4178 0.28 +0.6 4,350,281 - SO4178 0.28 -0.5 4,350,305 - SO4178 0.30 +0.8 4,350,337 + SO4178 0.33 +0.6 4,350,345 - SO4178 0.34 +0.1 4,350,354 - SO4178 0.35 -0.1 4,350,392 - SO4178 0.38 -1.0 4,350,424 + SO4178 0.41 +0.1 4,350,553 + SO4178 0.54 -2.4 4,350,599 + SO4178 0.58 +0.1 4,350,622 + SO4178 0.60 -0.2 4,350,739 + SO4178 0.71 -1.8 4,350,741 + SO4178 0.71 -0.5
Or see this region's nucleotide sequence