Strain Fitness in Shewanella oneidensis MR-1 around SO1075

Experiment: Ferric citrate electron acceptor

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ferric citrate electron acceptor
1,115,161	+		SO1074	0.35	-0.0
1,115,162	+		SO1074	0.35	-0.6
1,115,169	-		SO1074	0.36	-0.0
1,115,248	-		SO1074	0.42	-1.5
1,115,443	-		SO1074	0.59	-0.8
1,115,510	-		SO1074	0.64	-0.2
1,115,513	+		SO1074	0.65	+1.7
1,115,518	+		SO1074	0.65	+0.6
1,115,549	+		SO1074	0.68	-0.5
1,115,557	-		SO1074	0.68	+0.6
1,115,596	-		SO1074	0.72	+0.9
1,115,615	+		SO1074	0.73	-0.3
1,115,616	+		SO1074	0.73	+1.6
1,115,616	+		SO1074	0.73	-0.2
1,115,616	+		SO1074	0.73	-1.1
1,115,616	+		SO1074	0.73	-0.0
1,115,616	+		SO1074	0.73	-0.4
1,115,623	-		SO1074	0.74	+0.8
1,115,642	+		SO1074	0.76	-0.4
1,115,642	+		SO1074	0.76	-0.3
1,115,697	+		SO1074	0.80	-1.2
1,115,776	-		SO1074	0.87	-0.4
1,116,029	+				-0.7
1,116,130	-				-1.1
1,116,141	+				-1.6
1,116,219	-				+0.5
1,116,368	+		SO1075	0.10	+1.2
1,116,368	+		SO1075	0.10	+0.4
1,116,390	-		SO1075	0.11	-1.6
1,116,502	-		SO1075	0.16	-0.7
1,116,540	+		SO1075	0.18	-1.7
1,116,589	+		SO1075	0.20	-2.5
1,116,636	+		SO1075	0.22	-0.8
1,116,652	+		SO1075	0.23	+0.2
1,116,652	+		SO1075	0.23	-0.1
1,116,660	+		SO1075	0.24	-0.1
1,116,660	-		SO1075	0.24	-0.9
1,116,729	-		SO1075	0.27	-1.0
1,116,740	+		SO1075	0.27	-1.0
1,116,794	-		SO1075	0.30	-0.8
1,116,812	-		SO1075	0.31	-0.4
1,116,999	+		SO1075	0.39	+1.3
1,116,999	+		SO1075	0.39	-1.3
1,116,999	+		SO1075	0.39	+0.1
1,117,007	-		SO1075	0.40	-1.9
1,117,007	-		SO1075	0.40	-2.2
1,117,204	-		SO1075	0.49	+0.1
1,117,328	-		SO1075	0.55	+0.0
1,117,331	+		SO1075	0.55	+1.6
1,117,339	-		SO1075	0.55	-0.6
1,117,372	-		SO1075	0.57	+0.2
1,117,417	-		SO1075	0.59	-2.2
1,117,472	-		SO1075	0.61	-1.0
1,117,472	-		SO1075	0.61	+1.1
1,117,513	+		SO1075	0.63	-0.9
1,117,529	-		SO1075	0.64	+0.5
1,117,581	+		SO1075	0.66	-0.3
1,117,643	+		SO1075	0.69	-0.2
1,117,656	-		SO1075	0.70	-1.5
1,117,693	+		SO1075	0.71	+0.7
1,117,829	+		SO1075	0.78	+0.1
1,117,829	+		SO1075	0.78	+1.1
1,117,829	+		SO1075	0.78	-0.9
1,117,829	+		SO1075	0.78	-0.7
1,117,829	+		SO1075	0.78	-1.2
1,117,832	-		SO1075	0.78	-0.2
1,117,837	-		SO1075	0.78	-0.5
1,117,837	-		SO1075	0.78	-0.6
1,117,837	-		SO1075	0.78	+0.3
1,117,837	-		SO1075	0.78	+0.5
1,117,839	+		SO1075	0.78	-0.6
1,117,839	+		SO1075	0.78	-0.2
1,117,839	+		SO1075	0.78	-0.1
1,117,839	+		SO1075	0.78	-0.8
1,117,839	+		SO1075	0.78	+0.1
1,117,839	+		SO1075	0.78	-3.8
1,117,839	+		SO1075	0.78	+0.4
1,117,839	+		SO1075	0.78	-0.0
1,117,839	+		SO1075	0.78	-0.9
1,117,839	+		SO1075	0.78	+0.5
1,117,839	+		SO1075	0.78	-0.1
1,117,839	+		SO1075	0.78	+1.1
1,117,839	+		SO1075	0.78	-0.7
1,117,839	+		SO1075	0.78	+0.0
1,117,839	+		SO1075	0.78	-1.1
1,117,839	+		SO1075	0.78	-2.0
1,117,839	+		SO1075	0.78	+0.6
1,117,839	+		SO1075	0.78	-1.6
1,117,847	-		SO1075	0.79	-2.3
1,117,847	-		SO1075	0.79	-1.3
1,117,847	-		SO1075	0.79	-1.1
1,117,847	-		SO1075	0.79	+0.1
1,117,847	-		SO1075	0.79	+0.4
1,117,847	-		SO1075	0.79	-0.3
1,117,847	-		SO1075	0.79	+0.5
1,117,847	-		SO1075	0.79	-0.5
1,117,847	-		SO1075	0.79	+1.3
1,117,847	-		SO1075	0.79	+1.1
1,117,847	-		SO1075	0.79	+0.1
1,117,847	-		SO1075	0.79	-0.0
1,117,847	-		SO1075	0.79	+0.8
1,117,847	-		SO1075	0.79	+1.1
1,117,883	-		SO1075	0.80	-0.8
1,117,891	-		SO1075	0.81	-0.8
1,117,919	+		SO1075	0.82	+0.4
1,117,973	+		SO1075	0.84	-0.8
1,118,011	-		SO1075	0.86	-1.0
1,118,137	+				+1.1
1,118,154	+				-1.2
1,118,164	+				+0.2
1,118,218	+				+0.7
1,118,277	+				-0.0
1,118,304	+				-0.0
1,118,320	+				+1.1
1,118,327	+				+0.2
1,118,335	-				+1.2
1,118,345	-				+1.2
1,118,373	-		SO1076	0.15	+1.4
1,118,408	+		SO1076	0.45	+1.1
1,118,448	+		SO1076	0.79	-0.1
1,118,449	-		SO1076	0.80	-0.4
1,118,457	-		SO1076	0.87	-0.5
1,118,469	+				+1.1
1,118,486	+				+0.1
1,118,487	-				-1.0
1,118,547	+				-3.5
1,118,592	+				+1.2
1,118,715	-				-0.8
1,118,717	+				-2.8
1,118,717	+				-0.2
1,118,725	-				+0.1
1,118,783	+				+0.1
1,118,783	+				+1.5
1,118,786	-				+0.9
1,118,792	+				-1.0
1,118,813	+				-0.5
1,118,819	+				-0.6
1,118,819	+				-0.9
1,118,819	+				+0.6
1,118,827	-				-1.0
1,118,827	-				+1.0
1,118,832	+				+1.0
1,118,834	+				+2.0
1,118,841	+				+0.8
1,118,842	-				+1.1
1,118,844	-				-0.3
1,118,849	-				-0.1
1,118,849	-				+0.1
1,118,874	+				-0.9
1,118,898	+				-0.7
1,118,898	+				+2.0
1,118,898	+				-2.6
1,118,898	+				+0.9
1,118,898	+				+0.4
1,118,899	-				-0.6
1,118,906	-				+1.0
1,118,906	-				+0.0
1,118,906	-				-2.5
1,118,906	-				-0.4
1,118,906	-				-2.0
1,118,906	-				-1.3
1,118,915	+				-3.1
1,118,920	+				-1.2
1,118,920	+				-1.3
1,118,920	+				-0.1
1,118,920	+				+0.5
1,118,920	+				+2.8
1,118,920	+				-0.7
1,118,920	+				+0.5
1,118,920	+				+1.7
1,118,920	+				-3.8
1,118,928	-				-0.1
1,118,928	-				-2.7
1,118,928	-				+0.2
1,118,928	-				-0.9
1,118,928	-				+0.3
1,118,928	-				+0.5
1,118,928	-				-0.8
1,118,928	-				-0.1
1,118,928	-				+0.6
1,118,928	-				-0.2
1,118,928	-				-1.6
1,118,928	-				+0.1
1,118,928	-				-0.7
1,118,940	-				+1.0
1,118,991	+				+0.6
1,118,999	-				-0.1
1,119,003	+				+0.1
1,119,006	+				-0.0
1,119,006	-				+1.0
1,119,008	+				-0.6
1,119,009	-		SO1077	0.10	-1.6
1,119,011	+		SO1077	0.10	-0.4
1,119,011	-		SO1077	0.10	+0.1
1,119,014	-		SO1077	0.11	-0.8
1,119,038	-		SO1077	0.13	+0.2
1,119,053	-		SO1077	0.15	-3.1
1,119,083	-		SO1077	0.18	+0.8
1,119,083	-		SO1077	0.18	+1.0
1,119,112	+		SO1077	0.21	-0.7
1,119,140	+		SO1077	0.24	-1.3
1,119,140	+		SO1077	0.24	-1.5
1,119,146	+		SO1077	0.25	+0.4
1,119,146	+		SO1077	0.25	-2.3
1,119,146	+		SO1077	0.25	+1.1
1,119,148	+		SO1077	0.25	-1.3
1,119,148	+		SO1077	0.25	+0.5
1,119,148	+		SO1077	0.25	-0.7
1,119,153	+		SO1077	0.26	-3.1
1,119,154	-		SO1077	0.26	+0.5
1,119,154	-		SO1077	0.26	+0.5
1,119,154	-		SO1077	0.26	+0.8
1,119,154	-		SO1077	0.26	-2.0
1,119,156	-		SO1077	0.26	-1.8
1,119,156	-		SO1077	0.26	-0.5
1,119,156	-		SO1077	0.26	+1.7
1,119,164	-		SO1077	0.27	+0.4
1,119,197	-		SO1077	0.31	-0.4
1,119,216	+		SO1077	0.33	-0.2
1,119,216	+		SO1077	0.33	+1.3
1,119,231	-		SO1077	0.34	-0.3
1,119,237	+		SO1077	0.35	-0.8
1,119,237	+		SO1077	0.35	-1.4
1,119,237	+		SO1077	0.35	+0.2
1,119,237	+		SO1077	0.35	+0.8
1,119,237	+		SO1077	0.35	+0.2
1,119,237	+		SO1077	0.35	+0.2
1,119,237	+		SO1077	0.35	-0.6
1,119,237	+		SO1077	0.35	-1.2
1,119,237	+		SO1077	0.35	-1.8
1,119,237	+		SO1077	0.35	-0.2
1,119,237	+		SO1077	0.35	-0.3
1,119,237	+		SO1077	0.35	-3.0
1,119,237	+		SO1077	0.35	-0.1
1,119,237	+		SO1077	0.35	+2.0
1,119,245	-		SO1077	0.36	-3.3
1,119,245	-		SO1077	0.36	+0.6
1,119,245	-		SO1077	0.36	+4.2
1,119,245	-		SO1077	0.36	-0.5
1,119,245	-		SO1077	0.36	-1.0
1,119,245	-		SO1077	0.36	+0.0
1,119,245	-		SO1077	0.36	-0.0
1,119,245	-		SO1077	0.36	-1.5
1,119,245	-		SO1077	0.36	+1.7
1,119,245	-		SO1077	0.36	+1.3
1,119,245	-		SO1077	0.36	-1.5
1,119,245	-		SO1077	0.36	+1.6
1,119,245	-		SO1077	0.36	-0.7
1,119,245	-		SO1077	0.36	-0.7
1,119,245	-		SO1077	0.36	-0.2
1,119,245	-		SO1077	0.36	-1.9
1,119,245	-		SO1077	0.36	+1.1
1,119,252	-		SO1077	0.37	+0.2
1,119,252	-		SO1077	0.37	-0.9
1,119,255	+		SO1077	0.37	-1.1
1,119,255	+		SO1077	0.37	+0.5
1,119,260	+		SO1077	0.37	-1.0
1,119,260	+		SO1077	0.37	+1.9
1,119,260	+		SO1077	0.37	+0.4
1,119,260	+		SO1077	0.37	-1.0
1,119,260	+		SO1077	0.37	+1.3
1,119,260	+		SO1077	0.37	-1.5
1,119,260	+		SO1077	0.37	+0.3
1,119,260	+		SO1077	0.37	-0.3
1,119,260	+		SO1077	0.37	-1.0
1,119,260	+		SO1077	0.37	-0.6
1,119,260	+		SO1077	0.37	-0.7
1,119,260	+		SO1077	0.37	-2.3
1,119,260	+		SO1077	0.37	-0.0
1,119,260	+		SO1077	0.37	-0.8
1,119,260	+		SO1077	0.37	+0.3
1,119,260	+		SO1077	0.37	-1.2
1,119,260	+		SO1077	0.37	-0.6
1,119,260	+		SO1077	0.37	-0.5
1,119,260	+		SO1077	0.37	+1.6
1,119,260	+		SO1077	0.37	-0.2
1,119,260	+		SO1077	0.37	+1.0
1,119,260	+		SO1077	0.37	+1.6
1,119,260	+		SO1077	0.37	-0.8
1,119,260	+		SO1077	0.37	+1.1
1,119,260	+		SO1077	0.37	+1.4
1,119,260	+		SO1077	0.37	-1.5
1,119,260	+		SO1077	0.37	+2.3
1,119,260	+		SO1077	0.37	-0.5
1,119,260	+		SO1077	0.37	+0.6
1,119,260	+		SO1077	0.37	-0.2
1,119,260	+		SO1077	0.37	+0.3
1,119,260	+		SO1077	0.37	-2.4
1,119,260	+		SO1077	0.37	+0.3
1,119,260	+		SO1077	0.37	-0.7
1,119,260	+		SO1077	0.37	-0.1
1,119,260	+		SO1077	0.37	+0.5
1,119,260	+		SO1077	0.37	+1.3
1,119,260	+		SO1077	0.37	-0.4
1,119,260	+		SO1077	0.37	-1.0
1,119,260	+		SO1077	0.37	-0.7
1,119,260	+		SO1077	0.37	-1.0
1,119,260	+		SO1077	0.37	-0.6
1,119,260	+		SO1077	0.37	-0.8
1,119,260	+		SO1077	0.37	-0.5
1,119,260	+		SO1077	0.37	-0.3
1,119,260	+		SO1077	0.37	+0.8
1,119,260	+		SO1077	0.37	+0.6
1,119,260	+		SO1077	0.37	+0.4
1,119,260	+		SO1077	0.37	-1.0
1,119,260	+		SO1077	0.37	+2.1
1,119,260	+		SO1077	0.37	+0.4
1,119,260	+		SO1077	0.37	+2.1
1,119,260	+		SO1077	0.37	-0.8
1,119,263	-		SO1077	0.38	+1.0
1,119,263	-		SO1077	0.38	-1.3
1,119,265	+		SO1077	0.38	-0.1
1,119,268	+		SO1077	0.38	+0.3
1,119,268	-		SO1077	0.38	+0.3
1,119,268	-		SO1077	0.38	-0.4
1,119,268	-		SO1077	0.38	+0.1
1,119,268	-		SO1077	0.38	+1.2
1,119,268	-		SO1077	0.38	+0.3
1,119,268	-		SO1077	0.38	+0.4
1,119,268	-		SO1077	0.38	+0.7
1,119,268	-		SO1077	0.38	-0.8
1,119,268	-		SO1077	0.38	+0.4
1,119,268	-		SO1077	0.38	-0.5
1,119,268	-		SO1077	0.38	+0.2
1,119,268	-		SO1077	0.38	+0.4
1,119,268	-		SO1077	0.38	-0.7
1,119,268	-		SO1077	0.38	-1.5
1,119,268	-		SO1077	0.38	+0.9
1,119,268	-		SO1077	0.38	-0.5
1,119,268	-		SO1077	0.38	-1.0
1,119,268	-		SO1077	0.38	+0.2
1,119,268	-		SO1077	0.38	+0.6
1,119,268	-		SO1077	0.38	+0.0
1,119,268	-		SO1077	0.38	-0.3
1,119,268	-		SO1077	0.38	-0.5
1,119,268	-		SO1077	0.38	+1.1
1,119,268	-		SO1077	0.38	-1.6
1,119,268	-		SO1077	0.38	-1.5
1,119,268	-		SO1077	0.38	-1.3
1,119,268	-		SO1077	0.38	+0.0
1,119,268	-		SO1077	0.38	+1.1
1,119,268	-		SO1077	0.38	+0.1
1,119,268	-		SO1077	0.38	+0.8
1,119,268	-		SO1077	0.38	-1.9
1,119,268	-		SO1077	0.38	-2.2
1,119,268	-		SO1077	0.38	-0.0
1,119,268	-		SO1077	0.38	+0.5
1,119,268	-		SO1077	0.38	-2.3
1,119,268	-		SO1077	0.38	-0.7
1,119,268	-		SO1077	0.38	+0.3
1,119,268	-		SO1077	0.38	-0.0
1,119,268	-		SO1077	0.38	-1.3
1,119,268	-		SO1077	0.38	-2.0
1,119,268	-		SO1077	0.38	-1.0
1,119,268	-		SO1077	0.38	+0.3
1,119,268	-		SO1077	0.38	-0.0
1,119,268	-		SO1077	0.38	+0.3
1,119,268	-		SO1077	0.38	+1.1
1,119,268	-		SO1077	0.38	+1.2
1,119,268	-		SO1077	0.38	+0.3
1,119,268	-		SO1077	0.38	-1.2
1,119,268	-		SO1077	0.38	+2.1
1,119,268	-		SO1077	0.38	-1.4
1,119,270	+		SO1077	0.39	-1.4
1,119,284	+		SO1077	0.40	+0.8
1,119,287	-		SO1077	0.40	-0.3