Experiment: KB with Matrine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4751 and Psyr_4752 are separated by 255 nucleotides Psyr_4752 and Psyr_4753 overlap by 4 nucleotides
Psyr_4751: Psyr_4751 - signal recognition particle-docking protein FtsY, at 5,626,435 to 5,627,952
_4751
Psyr_4752: Psyr_4752 - Insulinase-like:Peptidase M16, C-terminal, at 5,628,208 to 5,629,560
_4752
Psyr_4753: Psyr_4753 - Insulinase-like:Peptidase M16, C-terminal, at 5,629,557 to 5,631,047
_4753
Position (kb) 5628
5629
5630 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5628.067 kb on - strand at 5628.147 kb on - strand at 5628.147 kb on - strand at 5628.191 kb on - strand at 5628.203 kb on + strand at 5628.379 kb on + strand, within Psyr_4752 at 5628.379 kb on + strand, within Psyr_4752 at 5628.550 kb on + strand, within Psyr_4752 at 5628.550 kb on + strand, within Psyr_4752 at 5628.558 kb on - strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.022 kb on - strand, within Psyr_4752 at 5629.022 kb on - strand, within Psyr_4752 at 5629.035 kb on - strand, within Psyr_4752 at 5629.112 kb on - strand, within Psyr_4752 at 5629.177 kb on + strand, within Psyr_4752 at 5629.360 kb on + strand, within Psyr_4752 at 5629.360 kb on + strand, within Psyr_4752 at 5629.360 kb on + strand, within Psyr_4752 at 5629.361 kb on - strand, within Psyr_4752 at 5629.361 kb on - strand, within Psyr_4752 at 5629.361 kb on - strand, within Psyr_4752 at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.502 kb on - strand at 5629.502 kb on - strand at 5630.508 kb on + strand, within Psyr_4753 at 5630.509 kb on - strand, within Psyr_4753
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Matrine 10 mM remove 5,628,067 - +0.5 5,628,147 - -1.4 5,628,147 - +1.0 5,628,191 - -0.5 5,628,203 + -2.7 5,628,379 + Psyr_4752 0.13 -2.8 5,628,379 + Psyr_4752 0.13 -0.1 5,628,550 + Psyr_4752 0.25 +0.2 5,628,550 + Psyr_4752 0.25 -1.3 5,628,558 - Psyr_4752 0.26 +0.0 5,629,021 + Psyr_4752 0.60 -0.1 5,629,021 + Psyr_4752 0.60 +0.3 5,629,021 + Psyr_4752 0.60 -0.8 5,629,021 + Psyr_4752 0.60 -1.0 5,629,022 - Psyr_4752 0.60 +0.3 5,629,022 - Psyr_4752 0.60 +0.3 5,629,035 - Psyr_4752 0.61 -0.5 5,629,112 - Psyr_4752 0.67 -0.5 5,629,177 + Psyr_4752 0.72 -1.7 5,629,360 + Psyr_4752 0.85 +0.0 5,629,360 + Psyr_4752 0.85 +0.0 5,629,360 + Psyr_4752 0.85 -0.4 5,629,361 - Psyr_4752 0.85 -1.6 5,629,361 - Psyr_4752 0.85 -1.0 5,629,361 - Psyr_4752 0.85 -1.7 5,629,501 + -0.5 5,629,501 + -0.1 5,629,501 + +0.8 5,629,501 + -0.4 5,629,501 + +0.7 5,629,502 - -0.5 5,629,502 - -0.1 5,630,508 + Psyr_4753 0.64 -1.3 5,630,509 - Psyr_4753 0.64 -0.4
Or see this region's nucleotide sequence