Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2847

Experiment: KB with Matrine 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Matrine 10 mM
3,419,948	+		Psyr_2846	0.38	-0.5
3,419,948	+		Psyr_2846	0.38	-0.6
3,419,982	+		Psyr_2846	0.41	+0.2
3,419,983	-		Psyr_2846	0.41	+1.5
3,419,983	-		Psyr_2846	0.41	+0.4
3,420,073	+		Psyr_2846	0.50	-0.6
3,420,073	+		Psyr_2846	0.50	+1.5
3,420,073	+		Psyr_2846	0.50	+0.7
3,420,073	+		Psyr_2846	0.50	+0.3
3,420,073	+		Psyr_2846	0.50	+0.7
3,420,073	+		Psyr_2846	0.50	+0.2
3,420,073	+		Psyr_2846	0.50	-0.0
3,420,074	-		Psyr_2846	0.50	-1.1
3,420,074	-		Psyr_2846	0.50	-0.6
3,420,074	-		Psyr_2846	0.50	+0.3
3,420,074	-		Psyr_2846	0.50	+1.2
3,420,074	-		Psyr_2846	0.50	-0.7
3,420,074	-		Psyr_2846	0.50	+0.6
3,420,074	-		Psyr_2846	0.50	-1.4
3,420,074	-		Psyr_2846	0.50	+0.2
3,420,103	+		Psyr_2846	0.53	-0.9
3,420,103	+		Psyr_2846	0.53	-1.9
3,420,143	+		Psyr_2846	0.57	+0.9
3,420,143	+		Psyr_2846	0.57	+0.2
3,420,143	+		Psyr_2846	0.57	-0.1
3,420,143	+		Psyr_2846	0.57	-0.7
3,420,143	+		Psyr_2846	0.57	+1.2
3,420,144	-		Psyr_2846	0.57	-1.6
3,420,144	-		Psyr_2846	0.57	+0.4
3,420,144	-		Psyr_2846	0.57	-0.3
3,420,144	-		Psyr_2846	0.57	+0.8
3,420,144	-		Psyr_2846	0.57	-2.0
3,420,148	+		Psyr_2846	0.57	+0.2
3,420,148	+		Psyr_2846	0.57	-0.7
3,420,148	+		Psyr_2846	0.57	+1.2
3,420,148	+		Psyr_2846	0.57	-0.6
3,420,148	+		Psyr_2846	0.57	-0.0
3,420,149	-		Psyr_2846	0.57	+0.1
3,420,201	-		Psyr_2846	0.63	-1.4
3,420,201	-		Psyr_2846	0.63	+1.2
3,420,201	-				-0.7
3,420,373	-		Psyr_2846	0.79	-0.7
3,420,373	-		Psyr_2846	0.79	+0.2
3,420,373	-		Psyr_2846	0.79	-0.3
3,420,373	-		Psyr_2846	0.79	-0.3
3,420,765	+				+0.7
3,420,765	+				-0.8
3,420,765	+				-0.5
3,420,765	+				-1.0
3,420,765	+				-0.8
3,420,765	+				-0.4
3,420,765	+				+2.8
3,420,765	+				+0.6
3,420,765	+				+0.1
3,420,765	+				-0.6
3,420,765	+				-0.1
3,420,765	+				-0.8
3,420,765	+				+1.2
3,420,765	+				-0.8
3,420,765	+				-2.3
3,420,765	+				+0.8
3,420,765	+				+0.3
3,420,765	+				-0.0
3,420,766	-				-0.5
3,420,766	-				+0.2
3,420,766	-				+0.0
3,420,766	-				+0.3
3,420,766	-				+0.8
3,420,766	-				+0.0
3,420,766	-				-0.8
3,420,766	-				-1.3
3,420,766	-				+0.5
3,420,766	-				+1.2
3,420,766	-				+0.7
3,420,766	-				-1.0
3,420,766	-				+0.1
3,420,766	-				+0.8
3,420,767	+				+0.2
3,420,767	+				+0.0
3,420,767	+				-0.4
3,420,767	+				-1.8
3,420,767	+				+0.5
3,420,767	+				-0.3
3,420,767	+				-1.1
3,420,767	+				-0.1
3,420,767	+				-1.7
3,420,767	+				-0.7
3,420,767	+				-2.4
3,420,767	+				+0.4
3,420,767	+				-0.6
3,420,767	+				-0.5
3,420,768	-				+0.2
3,420,768	-				+2.2
3,420,768	-				+1.4
3,420,768	-				-0.0
3,420,768	-				-0.0
3,420,768	-				+1.2
3,420,768	-				+0.3
3,420,768	-				+0.0
3,420,768	-				+0.2
3,420,768	-				+2.0
3,420,768	-				-1.1
3,420,768	-				-0.6
3,420,768	-				-0.8
3,420,768	-				+0.6
3,420,768	-				+0.5
3,420,768	-				+0.4
3,420,768	-				+0.3
3,420,768	-				-0.4
3,420,768	-				-0.2
3,420,769	+				-0.2
3,420,769	+				-0.0
3,420,769	+				+0.6
3,420,769	+				+1.9
3,420,769	+				+1.8
3,420,769	+				+2.2
3,420,770	-				-0.7
3,420,770	-				+0.9
3,420,770	-				-0.1
3,420,770	-				+0.4
3,420,770	-				-0.3
3,421,001	+		Psyr_2847	0.19	-0.9
3,421,132	-		Psyr_2847	0.48	-0.0
3,421,205	-		Psyr_2847	0.64	+0.4
3,421,280	+		Psyr_2847	0.81	-1.4
3,421,281	-		Psyr_2847	0.81	-0.2
3,421,323	+				-1.3
3,421,323	+				+0.1
3,421,323	+				-2.0
3,421,324	-				-0.4
3,421,324	-				-1.6
3,421,397	+				-1.1
3,421,397	+				-1.1
3,421,397	+				-1.0
3,421,397	+				+0.5
3,421,398	-				-0.1
3,421,398	-				+0.7
3,421,398	-				-0.5
3,421,398	-				-0.9
3,421,398	-				-0.0
3,421,398	-				-2.3
3,421,408	+				-0.7
3,421,408	+				-0.6
3,421,409	-				+1.4
3,421,409	-				+0.4
3,421,409	-				+0.1
3,421,410	+				-0.5
3,421,410	+				-0.4
3,421,411	-				-1.0
3,421,411	-				+1.2
3,421,411	-				+0.7
3,421,411	-				+0.4
3,421,411	-				-1.4
3,421,411	-				+0.1
3,421,418	-				-0.3
3,421,418	-				+1.0
3,421,433	+				-1.0
3,421,434	-				+0.0
3,421,438	+				-0.1
3,421,442	+				-3.5
3,421,443	-				+0.2
3,421,469	+				+1.4
3,421,469	+				-0.8
3,421,469	+				+0.1
3,421,470	-				-1.1
3,421,470	-				-0.9
3,421,533	+				-1.1
3,421,557	+		Psyr_2848	0.14	-1.4
3,421,558	-		Psyr_2848	0.14	-1.8
3,421,558	-		Psyr_2848	0.14	+0.2
3,421,622	-		Psyr_2848	0.29	-1.8
3,421,653	-		Psyr_2848	0.37	-0.0
3,421,696	-		Psyr_2848	0.47	+0.2
3,421,797	+		Psyr_2848	0.70	+1.2
3,421,797	+		Psyr_2848	0.70	-0.5
3,421,797	+		Psyr_2848	0.70	-0.4
3,421,798	-		Psyr_2848	0.71	+0.1
3,421,798	-		Psyr_2848	0.71	-1.0
3,421,893	-				+0.6
3,421,910	-				+0.5
3,421,924	-				+2.8
3,421,928	-				+0.2
3,421,955	+				-1.0
3,421,955	+				-0.4
3,421,955	+				-0.5
3,421,955	+				-0.8
3,421,955	+				-0.8
3,421,955	+				-1.0
3,421,955	+				+0.2
3,421,955	+				-0.6
3,421,955	+				-1.8
3,421,955	+				-1.6
3,421,956	-				-1.2
3,421,956	-				-1.7
3,421,956	-				+1.0
3,421,956	-				+0.9
3,421,956	-				+0.8
3,421,956	-				+0.1
3,421,956	-				+1.0
3,421,995	+				-0.1
3,421,997	+				-0.3
3,421,997	+				-0.3
3,421,997	+				+0.9
3,421,997	+				-2.7
3,422,001	+				-0.8
3,422,002	-				-2.1
3,422,002	-				-0.2
3,422,005	+				+0.4
3,422,099	+				-0.1
3,422,104	-				-0.1
3,422,185	+				-0.7
3,422,185	+				+0.6
3,422,185	+				+0.9
3,422,186	-				+0.8
3,422,186	-				+0.3
3,422,186	-				-0.7
3,422,186	-				+0.0
3,422,205	+				+0.3
3,422,205	+				-1.0
3,422,205	+				+0.2
3,422,205	+				+0.3
3,422,206	-				+0.6
3,422,206	-				-0.7
3,422,206	-				-0.6