Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28920

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
6,429,145	-		PFLU_RS28915	0.30	+0.4
6,429,201	-		PFLU_RS28915	0.35	-0.1
6,429,231	+		PFLU_RS28915	0.38	+0.4
6,429,232	-		PFLU_RS28915	0.38	-2.3
6,429,261	+		PFLU_RS28915	0.41	+0.4
6,429,261	+		PFLU_RS28915	0.41	+0.4
6,429,261	+		PFLU_RS28915	0.41	+0.5
6,429,261	+		PFLU_RS28915	0.41	+0.9
6,429,262	-		PFLU_RS28915	0.41	-0.2
6,429,262	-		PFLU_RS28915	0.41	-0.1
6,429,262	-		PFLU_RS28915	0.41	+0.9
6,429,262	-		PFLU_RS28915	0.41	+0.8
6,429,339	+		PFLU_RS28915	0.48	-0.4
6,429,340	-		PFLU_RS28915	0.48	+0.4
6,429,341	+		PFLU_RS28915	0.48	-0.3
6,429,341	+		PFLU_RS28915	0.48	-1.1
6,429,341	+		PFLU_RS28915	0.48	+0.1
6,429,341	+		PFLU_RS28915	0.48	-0.7
6,429,341	+		PFLU_RS28915	0.48	-0.2
6,429,342	-		PFLU_RS28915	0.48	+0.0
6,429,342	-		PFLU_RS28915	0.48	-1.3
6,429,357	+		PFLU_RS28915	0.49	-1.2
6,429,357	+		PFLU_RS28915	0.49	+0.5
6,429,358	-		PFLU_RS28915	0.50	+0.9
6,429,512	+		PFLU_RS28915	0.64	+1.7
6,429,512	+		PFLU_RS28915	0.64	+1.0
6,429,512	+		PFLU_RS28915	0.64	-2.2
6,429,512	+		PFLU_RS28915	0.64	-0.1
6,429,512	+		PFLU_RS28915	0.64	-0.2
6,429,512	+		PFLU_RS28915	0.64	-0.1
6,429,512	+		PFLU_RS28915	0.64	-0.5
6,429,512	+		PFLU_RS28915	0.64	-1.6
6,429,512	+		PFLU_RS28915	0.64	+0.7
6,429,512	+		PFLU_RS28915	0.64	-1.0
6,429,512	+		PFLU_RS28915	0.64	-0.2
6,429,512	+		PFLU_RS28915	0.64	-0.2
6,429,512	+		PFLU_RS28915	0.64	+0.4
6,429,513	-		PFLU_RS28915	0.64	+0.1
6,429,513	-		PFLU_RS28915	0.64	+0.5
6,429,513	-		PFLU_RS28915	0.64	+1.5
6,429,513	-		PFLU_RS28915	0.64	-1.9
6,429,513	-		PFLU_RS28915	0.64	-0.3
6,429,513	-		PFLU_RS28915	0.64	+0.2
6,429,513	-		PFLU_RS28915	0.64	-0.1
6,429,513	-		PFLU_RS28915	0.64	+0.8
6,429,513	-		PFLU_RS28915	0.64	-2.0
6,429,513	-		PFLU_RS28915	0.64	-0.7
6,429,513	-		PFLU_RS28915	0.64	-0.9
6,429,513	-		PFLU_RS28915	0.64	-0.5
6,429,513	-		PFLU_RS28915	0.64	-0.6
6,429,513	-		PFLU_RS28915	0.64	-0.1
6,429,513	-		PFLU_RS28915	0.64	+0.2
6,429,513	-		PFLU_RS28915	0.64	+0.3
6,429,513	-		PFLU_RS28915	0.64	+1.2
6,429,513	-		PFLU_RS28915	0.64	-0.0
6,429,513	-		PFLU_RS28915	0.64	+0.1
6,429,650	+		PFLU_RS28915	0.77	+0.6
6,429,650	+		PFLU_RS28915	0.77	+0.9
6,429,650	+		PFLU_RS28915	0.77	-0.6
6,429,650	+		PFLU_RS28915	0.77	-2.7
6,429,651	-		PFLU_RS28915	0.77	+0.8
6,429,651	-		PFLU_RS28915	0.77	+1.3
6,429,651	-		PFLU_RS28915	0.77	+0.4
6,429,651	-		PFLU_RS28915	0.77	+0.8
6,429,651	-		PFLU_RS28915	0.77	-1.3
6,429,651	-		PFLU_RS28915	0.77	+0.5
6,429,651	-		PFLU_RS28915	0.77	+0.4
6,429,651	-		PFLU_RS28915	0.77	-1.4
6,429,651	-		PFLU_RS28915	0.77	+0.0
6,429,651	-		PFLU_RS28915	0.77	+0.5
6,429,651	-		PFLU_RS28915	0.77	+0.5
6,429,651	-		PFLU_RS28915	0.77	-0.3
6,429,750	+		PFLU_RS28915	0.86	-0.1
6,429,750	+		PFLU_RS28915	0.86	+0.2
6,429,750	+		PFLU_RS28915	0.86	+0.0
6,429,750	+		PFLU_RS28915	0.86	+0.9
6,429,750	+		PFLU_RS28915	0.86	+0.1
6,429,750	+		PFLU_RS28915	0.86	-0.0
6,429,750	+		PFLU_RS28915	0.86	+0.1
6,429,750	+		PFLU_RS28915	0.86	+0.2
6,429,750	+		PFLU_RS28915	0.86	+0.3
6,429,750	+		PFLU_RS28915	0.86	+0.1
6,429,750	+		PFLU_RS28915	0.86	+0.6
6,429,751	-		PFLU_RS28915	0.86	-0.1
6,429,751	-		PFLU_RS28915	0.86	-1.4
6,429,751	-		PFLU_RS28915	0.86	-1.5
6,429,751	-		PFLU_RS28915	0.86	-1.2
6,429,757	+		PFLU_RS28915	0.86	-2.5
6,429,757	+		PFLU_RS28915	0.86	+0.7
6,429,757	+		PFLU_RS28915	0.86	-0.6
6,429,757	+		PFLU_RS28915	0.86	-0.1
6,429,757	+		PFLU_RS28915	0.86	-0.9
6,429,757	+		PFLU_RS28915	0.86	+0.5
6,429,757	+		PFLU_RS28915	0.86	-0.7
6,429,757	+		PFLU_RS28915	0.86	+0.1
6,429,757	+		PFLU_RS28915	0.86	-0.5
6,429,757	+		PFLU_RS28915	0.86	+1.5
6,429,757	+		PFLU_RS28915	0.86	-0.4
6,429,757	+		PFLU_RS28915	0.86	-1.4
6,429,757	+		PFLU_RS28915	0.86	-0.2
6,429,757	+		PFLU_RS28915	0.86	-2.2
6,429,758	-		PFLU_RS28915	0.87	+1.1
6,429,758	-		PFLU_RS28915	0.87	-1.3
6,429,758	-		PFLU_RS28915	0.87	+0.1
6,429,758	-		PFLU_RS28915	0.87	-0.4
6,429,758	-		PFLU_RS28915	0.87	-1.5
6,429,758	-		PFLU_RS28915	0.87	-0.1
6,429,758	-		PFLU_RS28915	0.87	+0.1
6,429,758	-		PFLU_RS28915	0.87	-0.2
6,429,758	-		PFLU_RS28915	0.87	-0.1
6,429,816	-				-0.6
6,429,816	-				+0.3
6,429,816	-				-0.7
6,429,829	-				+0.3
6,429,829	-				+1.1
6,429,829	-				+0.1
6,429,881	+				-0.2
6,429,881	+				-1.5
6,429,881	+				-0.7
6,429,881	+				+1.7
6,429,881	+				+1.6
6,429,881	+				-0.3
6,429,882	-				-0.5
6,429,891	+				-0.1
6,429,891	+				-0.7
6,429,892	-				+1.6
6,429,892	-				-0.5
6,429,892	-				-0.4
6,429,892	-				-0.9
6,429,892	-				+0.9
6,429,968	+				+1.3
6,429,968	+				+0.9
6,429,968	+				+0.2
6,429,968	+				+0.0
6,429,968	+				+0.3
6,429,969	-				-0.5
6,429,969	-				+1.7
6,429,969	-				+0.3
6,430,035	+				+0.3
6,430,036	-				-0.6
6,430,048	+				+0.1
6,430,061	+				+0.1
6,430,062	-				-0.8
6,430,062	-				-0.9
6,430,138	+				+1.7
6,430,304	+		PFLU_RS28920	0.15	-0.1
6,430,304	+		PFLU_RS28920	0.15	-1.3
6,430,304	+		PFLU_RS28920	0.15	+0.2
6,430,304	+		PFLU_RS28920	0.15	-0.5
6,430,304	+		PFLU_RS28920	0.15	+0.5
6,430,305	-		PFLU_RS28920	0.15	+0.3
6,430,305	-		PFLU_RS28920	0.15	-1.7
6,430,305	-		PFLU_RS28920	0.15	+0.4
6,430,305	-		PFLU_RS28920	0.15	-1.1
6,430,404	-		PFLU_RS28920	0.21	+0.3
6,430,431	-		PFLU_RS28920	0.23	-1.0
6,430,431	-		PFLU_RS28920	0.23	-0.7
6,430,431	-		PFLU_RS28920	0.23	-0.4
6,430,526	+		PFLU_RS28920	0.29	+0.1
6,430,526	+		PFLU_RS28920	0.29	+0.1
6,430,526	+		PFLU_RS28920	0.29	-0.6
6,430,526	+		PFLU_RS28920	0.29	+0.9
6,430,527	-		PFLU_RS28920	0.29	-0.5
6,430,527	-		PFLU_RS28920	0.29	+0.0
6,430,683	+		PFLU_RS28920	0.39	+1.0
6,430,694	+		PFLU_RS28920	0.39	+0.2
6,430,694	+		PFLU_RS28920	0.39	+0.2
6,430,694	+		PFLU_RS28920	0.39	-0.3
6,430,694	+		PFLU_RS28920	0.39	+0.7
6,430,694	+		PFLU_RS28920	0.39	-0.2
6,430,694	+		PFLU_RS28920	0.39	-0.9
6,430,694	+		PFLU_RS28920	0.39	+0.6
6,430,694	+		PFLU_RS28920	0.39	-0.3
6,430,695	-		PFLU_RS28920	0.39	+0.9
6,430,695	-		PFLU_RS28920	0.39	-0.4
6,430,695	-		PFLU_RS28920	0.39	-0.3
6,430,695	-		PFLU_RS28920	0.39	-0.2
6,430,695	-		PFLU_RS28920	0.39	+0.1
6,430,695	-		PFLU_RS28920	0.39	+0.1
6,430,721	+		PFLU_RS28920	0.41	-1.2
6,430,721	+		PFLU_RS28920	0.41	-1.6
6,430,805	-		PFLU_RS28920	0.46	-0.2
6,430,805	-		PFLU_RS28920	0.46	+0.8
6,430,805	-		PFLU_RS28920	0.46	+0.2
6,430,856	+		PFLU_RS28920	0.49	+0.5
6,430,856	+		PFLU_RS28920	0.49	-2.4
6,430,856	+		PFLU_RS28920	0.49	+0.3
6,430,856	+		PFLU_RS28920	0.49	-1.0
6,430,857	-		PFLU_RS28920	0.49	+0.2
6,430,857	-		PFLU_RS28920	0.49	+0.3
6,430,857	-		PFLU_RS28920	0.49	-1.0
6,430,857	-		PFLU_RS28920	0.49	-0.6
6,430,922	+		PFLU_RS28920	0.53	-0.7
6,430,922	+		PFLU_RS28920	0.53	-0.8
6,430,923	-		PFLU_RS28920	0.53	-2.7
6,430,978	+		PFLU_RS28920	0.57	-0.5
6,431,006	+		PFLU_RS28920	0.59	+0.1
6,431,006	+		PFLU_RS28920	0.59	-1.6
6,431,006	+		PFLU_RS28920	0.59	+1.5
6,431,006	+		PFLU_RS28920	0.59	-0.7
6,431,006	+		PFLU_RS28920	0.59	+0.0
6,431,006	+		PFLU_RS28920	0.59	+0.7
6,431,006	+		PFLU_RS28920	0.59	-0.0
6,431,006	+		PFLU_RS28920	0.59	-0.4
6,431,006	+		PFLU_RS28920	0.59	+1.1
6,431,006	+		PFLU_RS28920	0.59	+0.3
6,431,006	+		PFLU_RS28920	0.59	-0.3
6,431,006	+		PFLU_RS28920	0.59	-2.0
6,431,007	-		PFLU_RS28920	0.59	-2.8
6,431,007	-		PFLU_RS28920	0.59	+0.9
6,431,007	-		PFLU_RS28920	0.59	+0.9
6,431,007	-		PFLU_RS28920	0.59	-0.5
6,431,007	-		PFLU_RS28920	0.59	+0.3
6,431,007	-		PFLU_RS28920	0.59	+0.6
6,431,007	-		PFLU_RS28920	0.59	+0.9
6,431,007	-		PFLU_RS28920	0.59	+0.1
6,431,007	-		PFLU_RS28920	0.59	+0.8
6,431,007	-		PFLU_RS28920	0.59	-1.1
6,431,007	-		PFLU_RS28920	0.59	+0.4
6,431,007	-		PFLU_RS28920	0.59	-1.3
6,431,007	-		PFLU_RS28920	0.59	-1.2
6,431,007	-		PFLU_RS28920	0.59	-2.2
6,431,086	+		PFLU_RS28920	0.63	-2.0
6,431,086	+		PFLU_RS28920	0.63	-2.2
6,431,222	+		PFLU_RS28920	0.72	-0.3
6,431,222	+		PFLU_RS28920	0.72	+0.5
6,431,222	+		PFLU_RS28920	0.72	-0.2
6,431,222	+		PFLU_RS28920	0.72	-0.8
6,431,223	-		PFLU_RS28920	0.72	+0.1
6,431,223	-		PFLU_RS28920	0.72	-0.1
6,431,223	-		PFLU_RS28920	0.72	-0.8
6,431,223	-		PFLU_RS28920	0.72	-1.1
6,431,223	-		PFLU_RS28920	0.72	+0.4
6,431,223	-		PFLU_RS28920	0.72	+0.9
6,431,223	-		PFLU_RS28920	0.72	+0.1
6,431,223	-		PFLU_RS28920	0.72	-2.4
6,431,223	-		PFLU_RS28920	0.72	+0.5
6,431,223	-		PFLU_RS28920	0.72	+0.6
6,431,223	-		PFLU_RS28920	0.72	-0.8
6,431,223	-		PFLU_RS28920	0.72	-0.9
6,431,223	-		PFLU_RS28920	0.72	-1.6
6,431,223	-		PFLU_RS28920	0.72	-1.4
6,431,228	+		PFLU_RS28920	0.72	-1.1
6,431,228	+		PFLU_RS28920	0.72	-0.0
6,431,228	+		PFLU_RS28920	0.72	-0.0
6,431,228	+		PFLU_RS28920	0.72	-0.1
6,431,228	+		PFLU_RS28920	0.72	+0.6
6,431,228	+		PFLU_RS28920	0.72	+0.7
6,431,228	+		PFLU_RS28920	0.72	+0.1
6,431,229	-		PFLU_RS28920	0.72	-1.6
6,431,229	-		PFLU_RS28920	0.72	-0.2
6,431,229	-		PFLU_RS28920	0.72	-0.5
6,431,229	-		PFLU_RS28920	0.72	-0.0
6,431,229	-		PFLU_RS28920	0.72	-0.5
6,431,234	+		PFLU_RS28920	0.73	+0.6
6,431,234	+		PFLU_RS28920	0.73	+0.9
6,431,235	-		PFLU_RS28920	0.73	-0.0
6,431,235	-		PFLU_RS28920	0.73	-0.1
6,431,235	-		PFLU_RS28920	0.73	-2.2
6,431,235	-		PFLU_RS28920	0.73	-0.6
6,431,235	-		PFLU_RS28920	0.73	-0.2
6,431,235	-		PFLU_RS28920	0.73	-0.3
6,431,362	+		PFLU_RS28920	0.81	-1.4
6,431,362	+		PFLU_RS28920	0.81	-1.0
6,431,362	+		PFLU_RS28920	0.81	-0.5
6,431,362	+		PFLU_RS28920	0.81	-0.4
6,431,362	+		PFLU_RS28920	0.81	-0.5
6,431,363	-		PFLU_RS28920	0.81	+0.0
6,431,363	-		PFLU_RS28920	0.81	-0.6
6,431,363	-		PFLU_RS28920	0.81	-0.5
6,431,363	-		PFLU_RS28920	0.81	-0.9
6,431,378	+		PFLU_RS28920	0.82	+0.9
6,431,378	+		PFLU_RS28920	0.82	-0.6
6,431,378	+		PFLU_RS28920	0.82	-0.5
6,431,378	+		PFLU_RS28920	0.82	-0.2
6,431,378	+		PFLU_RS28920	0.82	-1.1
6,431,378	+		PFLU_RS28920	0.82	+0.2
6,431,378	+		PFLU_RS28920	0.82	+0.5
6,431,378	+		PFLU_RS28920	0.82	-0.9
6,431,378	+		PFLU_RS28920	0.82	+0.0
6,431,378	+		PFLU_RS28920	0.82	-0.6
6,431,378	+		PFLU_RS28920	0.82	-0.6
6,431,378	+		PFLU_RS28920	0.82	-1.0
6,431,378	+		PFLU_RS28920	0.82	+0.2
6,431,378	+		PFLU_RS28920	0.82	+0.5
6,431,378	+		PFLU_RS28920	0.82	+0.2
6,431,378	+		PFLU_RS28920	0.82	+1.8
6,431,378	+		PFLU_RS28920	0.82	+0.5
6,431,379	-		PFLU_RS28920	0.82	-2.7
6,431,379	-		PFLU_RS28920	0.82	-1.1
6,431,379	-		PFLU_RS28920	0.82	+1.1
6,431,379	-		PFLU_RS28920	0.82	-1.2
6,431,379	-		PFLU_RS28920	0.82	+0.0
6,431,379	-		PFLU_RS28920	0.82	-1.7
6,431,379	-		PFLU_RS28920	0.82	+0.9
6,431,379	-		PFLU_RS28920	0.82	-0.6
6,431,379	-		PFLU_RS28920	0.82	+0.7
6,431,379	-		PFLU_RS28920	0.82	-0.6
6,431,379	-		PFLU_RS28920	0.82	-0.8
6,431,379	-		PFLU_RS28920	0.82	-1.4
6,431,379	-		PFLU_RS28920	0.82	+0.5
6,431,379	-		PFLU_RS28920	0.82	-0.8
6,431,387	-		PFLU_RS28920	0.82	-0.2
6,431,448	+		PFLU_RS28920	0.86	+0.2
6,431,473	+		PFLU_RS28920	0.87	+0.7
6,431,474	-		PFLU_RS28920	0.87	-0.7
6,431,474	-		PFLU_RS28920	0.87	+0.5
6,431,474	-		PFLU_RS28920	0.87	-0.5
6,431,482	+		PFLU_RS28920	0.88	-1.5
6,431,482	+		PFLU_RS28920	0.88	+0.0
6,431,578	-				-1.0
6,431,578	-				+0.4
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6,431,649	-				-2.1
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6,431,698	+				-1.1
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6,431,699	-				-0.1
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