Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24565

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
5,503,233	+		PFLU_RS24560	0.35	-0.4
5,503,233	+		PFLU_RS24560	0.35	-1.2
5,503,233	+		PFLU_RS24560	0.35	-1.3
5,503,234	-		PFLU_RS24560	0.35	-0.8
5,503,234	-		PFLU_RS24560	0.35	+1.0
5,503,234	-		PFLU_RS24560	0.35	-0.6
5,503,235	+		PFLU_RS24560	0.36	+1.4
5,503,235	+		PFLU_RS24560	0.36	-0.0
5,503,235	+		PFLU_RS24560	0.36	+0.2
5,503,235	+		PFLU_RS24560	0.36	+0.9
5,503,235	+		PFLU_RS24560	0.36	+0.8
5,503,235	+		PFLU_RS24560	0.36	-0.7
5,503,235	+		PFLU_RS24560	0.36	-0.2
5,503,235	+		PFLU_RS24560	0.36	+0.2
5,503,235	+		PFLU_RS24560	0.36	-2.2
5,503,235	+		PFLU_RS24560	0.36	+1.3
5,503,235	+		PFLU_RS24560	0.36	-0.5
5,503,235	+		PFLU_RS24560	0.36	+0.6
5,503,235	+		PFLU_RS24560	0.36	+0.1
5,503,235	+		PFLU_RS24560	0.36	-2.4
5,503,236	-		PFLU_RS24560	0.36	-0.3
5,503,236	-		PFLU_RS24560	0.36	-1.1
5,503,236	-		PFLU_RS24560	0.36	-0.6
5,503,236	-		PFLU_RS24560	0.36	+1.1
5,503,236	-		PFLU_RS24560	0.36	-1.8
5,503,236	-		PFLU_RS24560	0.36	-0.4
5,503,236	-		PFLU_RS24560	0.36	+0.2
5,503,236	-		PFLU_RS24560	0.36	-0.3
5,503,236	-		PFLU_RS24560	0.36	+1.1
5,503,236	-		PFLU_RS24560	0.36	+1.4
5,503,236	-		PFLU_RS24560	0.36	-0.2
5,503,236	-		PFLU_RS24560	0.36	-0.4
5,503,236	-		PFLU_RS24560	0.36	-0.1
5,503,303	+		PFLU_RS24560	0.43	+0.7
5,503,304	-		PFLU_RS24560	0.43	-1.1
5,503,382	+		PFLU_RS24560	0.52	-0.7
5,503,382	+		PFLU_RS24560	0.52	-0.3
5,503,382	+		PFLU_RS24560	0.52	-0.3
5,503,382	+		PFLU_RS24560	0.52	+0.5
5,503,382	+		PFLU_RS24560	0.52	-0.7
5,503,382	+		PFLU_RS24560	0.52	-1.1
5,503,382	+		PFLU_RS24560	0.52	-0.3
5,503,382	+		PFLU_RS24560	0.52	-1.0
5,503,382	+		PFLU_RS24560	0.52	-2.3
5,503,382	+		PFLU_RS24560	0.52	+0.3
5,503,382	+		PFLU_RS24560	0.52	-1.0
5,503,382	+		PFLU_RS24560	0.52	-2.2
5,503,382	+		PFLU_RS24560	0.52	+0.6
5,503,382	+		PFLU_RS24560	0.52	+0.3
5,503,382	+		PFLU_RS24560	0.52	-0.3
5,503,383	-		PFLU_RS24560	0.52	+0.7
5,503,383	-		PFLU_RS24560	0.52	-0.2
5,503,383	-		PFLU_RS24560	0.52	-1.5
5,503,383	-		PFLU_RS24560	0.52	+0.2
5,503,383	-		PFLU_RS24560	0.52	+0.8
5,503,383	-		PFLU_RS24560	0.52	-0.5
5,503,383	-		PFLU_RS24560	0.52	-1.2
5,503,383	-		PFLU_RS24560	0.52	+0.1
5,503,383	-		PFLU_RS24560	0.52	-1.3
5,503,383	-		PFLU_RS24560	0.52	-1.1
5,503,383	-		PFLU_RS24560	0.52	-0.3
5,503,383	-		PFLU_RS24560	0.52	+0.4
5,503,556	+		PFLU_RS24560	0.71	-1.2
5,503,556	+		PFLU_RS24560	0.71	-1.3
5,503,557	-		PFLU_RS24560	0.71	-0.1
5,503,562	+		PFLU_RS24560	0.72	-0.3
5,503,563	-		PFLU_RS24560	0.72	-1.1
5,503,563	-		PFLU_RS24560	0.72	-1.0
5,503,563	-		PFLU_RS24560	0.72	+1.0
5,503,610	+		PFLU_RS24560	0.77	+0.0
5,503,611	-		PFLU_RS24560	0.77	+0.3
5,503,611	-		PFLU_RS24560	0.77	+0.6
5,503,611	-		PFLU_RS24560	0.77	-1.8
5,503,611	-		PFLU_RS24560	0.77	+0.1
5,503,724	+				-1.2
5,503,725	-				+0.5
5,503,830	+				-1.3
5,503,830	+				-0.1
5,503,830	+				+0.6
5,503,830	+				-0.5
5,503,830	+				+1.0
5,503,830	+				-0.6
5,503,830	+				+0.3
5,503,831	-				-0.9
5,503,831	-				-1.2
5,503,831	-				-0.8
5,503,831	-				+1.8
5,503,831	-				+1.1
5,503,831	-				-0.4
5,503,852	-				+0.2
5,503,852	-				-0.5
5,503,852	-				+0.0
5,503,931	+				-0.3
5,503,931	+				+0.2
5,503,931	+				-0.7
5,503,931	+				-0.6
5,503,931	+				-0.7
5,503,931	+				+0.2
5,503,931	+				-2.7
5,503,931	+				+0.4
5,503,932	-				+0.0
5,503,932	-				-0.6
5,503,932	-				+1.4
5,503,932	-				-0.3
5,503,932	-				+1.4
5,503,932	-				-0.4
5,503,932	-				-1.1
5,503,935	+				+0.0
5,503,935	+				-0.3
5,503,935	+				+0.4
5,503,935	+				+1.1
5,503,935	+				+0.4
5,503,935	+				+0.4
5,503,935	+				-0.3
5,503,935	+				+0.2
5,503,935	+				-0.3
5,503,935	+				+1.1
5,503,935	+				-0.9
5,503,935	+				-2.0
5,503,935	+				-1.0
5,503,935	+				-1.7
5,503,935	+				+0.2
5,503,935	+				+1.0
5,503,935	+				+0.6
5,503,935	+				-0.1
5,503,936	-				+0.1
5,503,936	-				-1.4
5,503,936	-				-0.4
5,503,936	-				+0.3
5,503,936	-				-0.5
5,503,936	-				-0.8
5,503,936	-				+0.2
5,503,936	-				-1.8
5,503,936	-				+0.3
5,503,936	-				-0.3
5,503,936	-				+0.3
5,503,936	-				-0.0
5,503,936	-				-0.7
5,503,936	-				-2.5
5,503,936	-				-1.5
5,503,936	-				-1.5
5,503,936	-				+0.7
5,503,936	-				+0.3
5,503,936	-				-0.2
5,503,936	-				-0.6
5,503,936	-				+0.7
5,503,936	-				-2.3
5,503,936	-				+0.0
5,503,936	-				-1.7
5,503,936	-				+0.4
5,503,936	-				+1.2
5,503,936	-				-0.9
5,503,936	-				+0.2
5,503,936	-				-0.1
5,503,936	-				+0.0
5,503,936	-				+0.0
5,503,936	-				+0.0
5,503,936	-				+0.7
5,503,936	-				-0.4
5,503,936	-				+1.9
5,503,936	-				+0.1
5,503,936	-				-0.3
5,503,936	-				+0.0
5,503,936	-				+0.3
5,503,936	-				-0.4
5,503,937	+				-0.2
5,503,937	+				+0.9
5,503,937	+				-0.4
5,503,937	+				+1.0
5,503,937	+				+0.0
5,503,937	+				+0.4
5,503,937	+				-1.1
5,503,937	+				-1.1
5,503,937	+				+0.1
5,503,937	+				-2.6
5,503,937	+				+0.6
5,503,937	+				-1.1
5,503,937	+				+0.5
5,503,937	+				-1.0
5,503,937	+				+0.5
5,503,937	+				-1.0
5,503,937	+				-1.0
5,503,937	+				+0.5
5,503,937	+				-1.1
5,503,938	-				+0.6
5,503,938	-				+1.3
5,503,938	-				+0.1
5,503,938	-				+1.2
5,503,938	-				+0.4
5,503,938	-				-0.1
5,503,938	-				+0.1
5,503,938	-				+0.3
5,503,938	-				+0.4
5,503,938	-				+0.5
5,503,938	-				-0.6
5,503,938	-				+0.1
5,503,938	-				-0.5
5,503,938	-				+0.2
5,503,938	-				+0.2
5,503,938	-				-1.5
5,503,938	-				+1.2
5,503,938	-				-1.4
5,503,938	-				-0.9
5,503,938	-				-0.5
5,503,938	-				+0.8
5,503,938	-				-0.9
5,503,938	-				+1.1
5,503,938	-				-0.0
5,503,938	-				-0.3
5,503,938	-				+1.8
5,503,938	-				-0.5
5,503,938	-				+0.3
5,503,938	-				+1.3
5,503,938	-				+0.0
5,503,938	-				+1.3
5,503,938	-				+0.2
5,503,938	-				+0.7
5,503,938	-				+0.9
5,503,938	-				-0.5
5,503,938	-				+0.7
5,503,938	-				-0.1
5,503,938	-				+0.2
5,503,938	-				+0.5
5,503,938	-				+0.3
5,503,938	-				+0.2
5,503,938	-				+0.3
5,503,939	+				-0.3
5,503,940	-				+0.2
5,503,940	-				-0.1
5,503,940	-				-0.1
5,503,940	-				-0.4
5,503,940	-				+0.6
5,503,940	-				+0.9
5,503,940	-				-0.7
5,503,940	-				-1.1
5,503,940	-				-0.1
5,503,940	-				+1.9
5,503,940	-				-0.9
5,503,940	-				-0.0
5,503,940	-				+0.7
5,503,940	-				-1.9
5,503,940	-				+0.2
5,503,940	-				-1.2
5,503,940	-				-0.3
5,503,940	-				+1.0
5,503,940	-				+0.0
5,503,940	-				-1.1
5,503,940	-				-0.9
5,503,940	-				-1.5
5,503,940	-				+0.3
5,503,940	-				+0.8
5,503,940	-				-0.2
5,503,940	-				+0.7
5,503,940	-				+0.4
5,503,940	-				-1.5
5,503,940	-				-0.2
5,503,940	-				+0.1
5,503,940	-				-1.0
5,503,940	-				-0.5
5,503,940	-				-0.6
5,503,940	-				+0.3
5,503,940	-				+0.1
5,503,940	-				+1.0
5,503,940	-				+0.0
5,503,940	-				-0.2
5,503,940	-				-0.9
5,503,940	-				-0.3
5,503,940	-				-1.0
5,503,940	-				+0.9
5,503,940	-				+0.3
5,503,940	-				-0.3
5,503,940	-				+0.2
5,503,940	-				-0.0
5,503,940	-				+0.9
5,503,940	-				-1.3
5,503,940	-				+0.6
5,503,940	-				-0.9
5,503,940	-				+1.1
5,503,940	-				+0.4
5,503,940	-				-0.5
5,503,940	-				+0.2
5,503,940	-				+0.8
5,503,940	-				+0.6
5,503,940	-				-0.1
5,503,952	-				-0.9
5,503,952	-				-0.2
5,503,952	-				+0.8
5,503,952	-				-0.8
5,503,952	-				+0.1
5,503,995	+				+0.4
5,504,018	+				-0.3
5,504,018	+				+0.2
5,504,018	+				+0.4
5,504,079	+				-0.6
5,504,079	+				+1.0
5,504,079	+				+0.4
5,504,079	+				+0.2
5,504,079	+				-1.0
5,504,091	+				+0.3
5,504,119	+				+0.8
5,504,119	+				-0.0
5,504,119	+				+0.7
5,504,119	+				-1.9
5,504,119	+				-0.7
5,504,119	+				-0.6
5,504,119	+				-1.3
5,504,119	+				-1.6
5,504,119	+				-0.3
5,504,119	+				+0.5
5,504,119	+				-0.6
5,504,119	+				+0.6
5,504,119	+				-0.8
5,504,119	+				-1.5
5,504,119	+				+0.8
5,504,120	-				-0.6
5,504,120	-				-0.1
5,504,120	-				+1.8
5,504,123	+				-1.3
5,504,124	-				+0.3
5,504,155	-				+1.0
5,504,155	-				-0.5
5,504,155	-				-1.1
5,504,189	-				+0.2
5,504,189	-				+0.6
5,504,189	-				+0.5
5,504,189	-				-0.6
5,504,240	-		PFLU_RS24565	0.15	+1.5
5,504,240	-		PFLU_RS24565	0.15	+0.7
5,504,243	-		PFLU_RS24565	0.16	-1.1
5,504,243	-		PFLU_RS24565	0.16	-1.0
5,504,554	-				+1.1
5,504,568	-				-1.1
5,504,585	-				+1.0
5,504,585	-				-0.4
5,504,585	-				-0.0
5,504,585	-				+0.1
5,504,585	-				-0.4
5,504,585	-				+0.5
5,504,585	-				-0.6
5,504,585	-				+0.3
5,505,340	-				-0.6
5,505,340	-				+0.4
5,505,340	-				-0.0
5,505,340	-				+0.8
5,505,340	-				-0.1
5,505,340	-				-1.1
5,505,340	-				-0.2
5,505,340	-				-1.6
5,505,340	-				+1.4
5,505,340	-				-0.1