Experiment: RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20600 and BWI76_RS20605 are separated by 60 nucleotides BWI76_RS20605 and BWI76_RS20610 are separated by 122 nucleotides
BWI76_RS20600: BWI76_RS20600 - nucleoside permease, at 4,310,467 to 4,311,723
_RS20600
BWI76_RS20605: BWI76_RS20605 - purine-nucleoside phosphorylase, at 4,311,784 to 4,312,617
_RS20605
BWI76_RS20610: BWI76_RS20610 - LysR family transcriptional regulator, at 4,312,740 to 4,313,666
_RS20610
Position (kb) 4311
4312
4313 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4310.796 kb on + strand, within BWI76_RS20600 at 4310.804 kb on - strand, within BWI76_RS20600 at 4310.811 kb on - strand, within BWI76_RS20600 at 4310.842 kb on + strand, within BWI76_RS20600 at 4310.849 kb on + strand, within BWI76_RS20600 at 4311.241 kb on - strand, within BWI76_RS20600 at 4311.241 kb on - strand, within BWI76_RS20600 at 4311.255 kb on + strand, within BWI76_RS20600 at 4311.263 kb on - strand, within BWI76_RS20600 at 4311.371 kb on - strand, within BWI76_RS20600 at 4311.498 kb on - strand, within BWI76_RS20600 at 4311.500 kb on - strand, within BWI76_RS20600 at 4311.512 kb on - strand, within BWI76_RS20600 at 4311.514 kb on - strand, within BWI76_RS20600 at 4311.524 kb on - strand, within BWI76_RS20600 at 4311.640 kb on + strand at 4311.811 kb on + strand at 4311.927 kb on + strand, within BWI76_RS20605 at 4312.190 kb on - strand, within BWI76_RS20605 at 4312.320 kb on + strand, within BWI76_RS20605 at 4312.378 kb on + strand, within BWI76_RS20605 at 4312.577 kb on + strand at 4312.621 kb on - strand at 4313.394 kb on - strand, within BWI76_RS20610 at 4313.416 kb on + strand, within BWI76_RS20610 at 4313.476 kb on + strand, within BWI76_RS20610 at 4313.493 kb on - strand, within BWI76_RS20610 at 4313.530 kb on - strand, within BWI76_RS20610 at 4313.582 kb on + strand at 4313.590 kb on - strand at 4313.602 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL remove 4,310,796 + BWI76_RS20600 0.26 +2.8 4,310,804 - BWI76_RS20600 0.27 +1.0 4,310,811 - BWI76_RS20600 0.27 +1.1 4,310,842 + BWI76_RS20600 0.30 +0.4 4,310,849 + BWI76_RS20600 0.30 -0.2 4,311,241 - BWI76_RS20600 0.62 -0.6 4,311,241 - BWI76_RS20600 0.62 -0.6 4,311,255 + BWI76_RS20600 0.63 +0.2 4,311,263 - BWI76_RS20600 0.63 +0.9 4,311,371 - BWI76_RS20600 0.72 +0.1 4,311,498 - BWI76_RS20600 0.82 -2.0 4,311,500 - BWI76_RS20600 0.82 -0.5 4,311,512 - BWI76_RS20600 0.83 -0.2 4,311,514 - BWI76_RS20600 0.83 +0.1 4,311,524 - BWI76_RS20600 0.84 -0.1 4,311,640 + -2.3 4,311,811 + +1.7 4,311,927 + BWI76_RS20605 0.17 +0.3 4,312,190 - BWI76_RS20605 0.49 -1.4 4,312,320 + BWI76_RS20605 0.64 +1.7 4,312,378 + BWI76_RS20605 0.71 +1.7 4,312,577 + +0.5 4,312,621 - -2.5 4,313,394 - BWI76_RS20610 0.71 -2.4 4,313,416 + BWI76_RS20610 0.73 +0.3 4,313,476 + BWI76_RS20610 0.79 +1.1 4,313,493 - BWI76_RS20610 0.81 +2.4 4,313,530 - BWI76_RS20610 0.85 -0.4 4,313,582 + +0.5 4,313,590 - -0.2 4,313,602 - +0.4
Or see this region's nucleotide sequence