Experiment: MoLS4 with L-Glutamine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0755 and DVU0756 are separated by 211 nucleotides DVU0756 and DVU0757 overlap by 1 nucleotides DVU0757 and DVU0758 are separated by 204 nucleotides DVU0758 and DVU0759 overlap by 23 nucleotides
DVU0755: DVU0755 - sensor histidine kinase, putative (TIGR), at 846,505 to 847,872
DVU0755
DVU0756: DVU0756 - TPR domain protein (TIGR), at 848,084 to 848,797
DVU0756
DVU0757: DVU0757 - hypothetical protein (TIGR), at 848,797 to 849,117
DVU0757
DVU0758: DVU0758 - hypothetical protein (TIGR), at 849,322 to 849,771
DVU0758
DVU0759: DVU0759 - peptidase, M29 family (TIGR), at 849,749 to 850,954
DVU0759
Position (kb) 848
849 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 847.211 kb on + strand, within DVU0755 at 847.359 kb on + strand, within DVU0755 at 847.449 kb on - strand, within DVU0755 at 847.485 kb on + strand, within DVU0755 at 847.493 kb on - strand, within DVU0755 at 847.591 kb on - strand, within DVU0755 at 847.592 kb on - strand, within DVU0755 at 847.600 kb on + strand, within DVU0755 at 847.613 kb on - strand, within DVU0755 at 847.613 kb on - strand, within DVU0755 at 847.628 kb on + strand, within DVU0755 at 847.630 kb on - strand, within DVU0755 at 847.693 kb on + strand, within DVU0755 at 847.758 kb on + strand at 847.773 kb on - strand at 847.849 kb on + strand at 847.857 kb on - strand at 847.882 kb on + strand at 847.916 kb on + strand at 847.941 kb on + strand at 848.018 kb on - strand at 848.132 kb on + strand at 848.149 kb on + strand at 848.243 kb on + strand, within DVU0756 at 848.251 kb on - strand, within DVU0756 at 848.284 kb on + strand, within DVU0756 at 848.304 kb on + strand, within DVU0756 at 848.381 kb on - strand, within DVU0756 at 848.385 kb on + strand, within DVU0756 at 848.393 kb on - strand, within DVU0756 at 848.393 kb on - strand, within DVU0756 at 848.418 kb on - strand, within DVU0756 at 848.470 kb on - strand, within DVU0756 at 848.530 kb on - strand, within DVU0756 at 848.554 kb on - strand, within DVU0756 at 848.557 kb on - strand, within DVU0756 at 848.598 kb on - strand, within DVU0756 at 848.608 kb on + strand, within DVU0756 at 848.692 kb on - strand, within DVU0756 at 848.945 kb on - strand, within DVU0757 at 848.984 kb on + strand, within DVU0757 at 848.984 kb on + strand, within DVU0757 at 848.989 kb on + strand, within DVU0757 at 848.992 kb on - strand, within DVU0757 at 848.992 kb on - strand, within DVU0757 at 849.005 kb on - strand, within DVU0757 at 849.027 kb on - strand, within DVU0757 at 849.166 kb on - strand at 849.224 kb on + strand at 849.317 kb on - strand at 849.317 kb on - strand at 849.345 kb on - strand at 849.486 kb on - strand, within DVU0758 at 849.585 kb on + strand, within DVU0758 at 849.618 kb on - strand, within DVU0758 at 849.618 kb on - strand, within DVU0758 at 849.619 kb on - strand, within DVU0758 at 849.619 kb on - strand, within DVU0758 at 849.756 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine as nutrient 10mM remove 847,211 + DVU0755 0.52 -0.8 847,359 + DVU0755 0.62 -3.1 847,449 - DVU0755 0.69 -2.8 847,485 + DVU0755 0.72 -0.1 847,493 - DVU0755 0.72 -1.3 847,591 - DVU0755 0.79 -0.6 847,592 - DVU0755 0.79 -0.7 847,600 + DVU0755 0.80 +0.1 847,613 - DVU0755 0.81 -0.2 847,613 - DVU0755 0.81 -0.6 847,628 + DVU0755 0.82 -0.4 847,630 - DVU0755 0.82 -0.3 847,693 + DVU0755 0.87 -0.2 847,758 + +0.6 847,773 - -3.9 847,849 + +0.1 847,857 - -0.6 847,882 + -3.1 847,916 + -0.4 847,941 + +0.2 848,018 - -0.3 848,132 + +0.2 848,149 + -0.0 848,243 + DVU0756 0.22 -0.1 848,251 - DVU0756 0.23 +0.6 848,284 + DVU0756 0.28 +0.9 848,304 + DVU0756 0.31 -0.9 848,381 - DVU0756 0.42 -0.4 848,385 + DVU0756 0.42 -1.7 848,393 - DVU0756 0.43 -0.3 848,393 - DVU0756 0.43 -0.3 848,418 - DVU0756 0.47 -0.3 848,470 - DVU0756 0.54 -1.6 848,530 - DVU0756 0.62 -3.4 848,554 - DVU0756 0.66 -0.2 848,557 - DVU0756 0.66 -0.0 848,598 - DVU0756 0.72 +0.4 848,608 + DVU0756 0.73 -0.2 848,692 - DVU0756 0.85 +0.2 848,945 - DVU0757 0.46 -2.6 848,984 + DVU0757 0.58 +1.6 848,984 + DVU0757 0.58 +1.7 848,989 + DVU0757 0.60 +0.3 848,992 - DVU0757 0.61 +0.0 848,992 - DVU0757 0.61 +0.4 849,005 - DVU0757 0.65 -0.6 849,027 - DVU0757 0.72 -1.2 849,166 - +0.1 849,224 + -0.1 849,317 - +1.5 849,317 - -0.5 849,345 - +0.2 849,486 - DVU0758 0.36 +0.1 849,585 + DVU0758 0.58 +0.2 849,618 - DVU0758 0.66 -2.4 849,618 - DVU0758 0.66 -0.2 849,619 - DVU0758 0.66 +0.4 849,619 - DVU0758 0.66 -0.1 849,756 + +0.1
Or see this region's nucleotide sequence