Experiment: MoLS4 with L-Glutamine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0756 and DVU0757 overlap by 1 nucleotides DVU0757 and DVU0758 are separated by 204 nucleotides DVU0758 and DVU0759 overlap by 23 nucleotides DVU0759 and DVU0760 are separated by 262 nucleotides
DVU0756: DVU0756 - TPR domain protein (TIGR), at 848,084 to 848,797
DVU0756
DVU0757: DVU0757 - hypothetical protein (TIGR), at 848,797 to 849,117
DVU0757
DVU0758: DVU0758 - hypothetical protein (TIGR), at 849,322 to 849,771
DVU0758
DVU0759: DVU0759 - peptidase, M29 family (TIGR), at 849,749 to 850,954
DVU0759
DVU0760: DVU0760 - hypothetical protein (TIGR), at 851,217 to 852,347
DVU0760
Position (kb) 849
850
851 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 848.945 kb on - strand, within DVU0757 at 848.984 kb on + strand, within DVU0757 at 848.984 kb on + strand, within DVU0757 at 848.989 kb on + strand, within DVU0757 at 848.992 kb on - strand, within DVU0757 at 848.992 kb on - strand, within DVU0757 at 849.005 kb on - strand, within DVU0757 at 849.027 kb on - strand, within DVU0757 at 849.166 kb on - strand at 849.224 kb on + strand at 849.317 kb on - strand at 849.317 kb on - strand at 849.345 kb on - strand at 849.486 kb on - strand, within DVU0758 at 849.585 kb on + strand, within DVU0758 at 849.618 kb on - strand, within DVU0758 at 849.618 kb on - strand, within DVU0758 at 849.619 kb on - strand, within DVU0758 at 849.619 kb on - strand, within DVU0758 at 849.756 kb on + strand at 849.803 kb on + strand at 849.819 kb on + strand at 849.841 kb on + strand at 849.890 kb on - strand, within DVU0759 at 849.907 kb on - strand, within DVU0759 at 849.927 kb on + strand, within DVU0759 at 850.079 kb on + strand, within DVU0759 at 850.129 kb on + strand, within DVU0759 at 850.135 kb on - strand, within DVU0759 at 850.220 kb on + strand, within DVU0759 at 850.296 kb on - strand, within DVU0759 at 850.320 kb on - strand, within DVU0759 at 850.386 kb on - strand, within DVU0759 at 850.437 kb on - strand, within DVU0759 at 850.437 kb on - strand, within DVU0759 at 850.498 kb on + strand, within DVU0759 at 850.506 kb on - strand, within DVU0759 at 850.544 kb on - strand, within DVU0759 at 850.666 kb on + strand, within DVU0759 at 850.676 kb on + strand, within DVU0759 at 850.676 kb on + strand, within DVU0759 at 850.869 kb on + strand at 850.913 kb on - strand at 850.995 kb on + strand at 851.001 kb on + strand at 851.003 kb on - strand at 851.003 kb on - strand at 851.051 kb on - strand at 851.119 kb on + strand at 851.172 kb on + strand at 851.228 kb on - strand at 851.314 kb on - strand at 851.334 kb on - strand, within DVU0760 at 851.405 kb on - strand, within DVU0760 at 851.435 kb on - strand, within DVU0760 at 851.463 kb on - strand, within DVU0760 at 851.511 kb on + strand, within DVU0760 at 851.518 kb on + strand, within DVU0760 at 851.553 kb on + strand, within DVU0760 at 851.559 kb on + strand, within DVU0760 at 851.610 kb on + strand, within DVU0760 at 851.618 kb on - strand, within DVU0760 at 851.671 kb on + strand, within DVU0760 at 851.679 kb on - strand, within DVU0760 at 851.679 kb on - strand, within DVU0760 at 851.706 kb on + strand, within DVU0760 at 851.828 kb on - strand, within DVU0760
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine as nutrient 10mM remove 848,945 - DVU0757 0.46 -4.1 848,984 + DVU0757 0.58 -0.6 848,984 + DVU0757 0.58 -0.0 848,989 + DVU0757 0.60 -0.1 848,992 - DVU0757 0.61 -0.1 848,992 - DVU0757 0.61 +0.1 849,005 - DVU0757 0.65 -0.5 849,027 - DVU0757 0.72 -0.5 849,166 - +0.0 849,224 + -0.2 849,317 - -1.4 849,317 - -0.8 849,345 - -0.1 849,486 - DVU0758 0.36 +0.4 849,585 + DVU0758 0.58 -1.4 849,618 - DVU0758 0.66 -2.7 849,618 - DVU0758 0.66 +2.1 849,619 - DVU0758 0.66 +0.6 849,619 - DVU0758 0.66 -0.6 849,756 + -0.2 849,803 + +0.9 849,819 + -0.7 849,841 + -0.5 849,890 - DVU0759 0.12 +0.4 849,907 - DVU0759 0.13 -0.5 849,927 + DVU0759 0.15 -0.0 850,079 + DVU0759 0.27 -0.5 850,129 + DVU0759 0.32 +0.0 850,135 - DVU0759 0.32 -3.0 850,220 + DVU0759 0.39 -0.7 850,296 - DVU0759 0.45 -2.1 850,320 - DVU0759 0.47 +0.1 850,386 - DVU0759 0.53 -3.2 850,437 - DVU0759 0.57 +0.3 850,437 - DVU0759 0.57 +1.1 850,498 + DVU0759 0.62 -0.3 850,506 - DVU0759 0.63 -1.7 850,544 - DVU0759 0.66 +0.8 850,666 + DVU0759 0.76 -0.2 850,676 + DVU0759 0.77 +0.3 850,676 + DVU0759 0.77 -0.8 850,869 + -0.5 850,913 - -3.6 850,995 + -0.4 851,001 + -0.1 851,003 - -0.2 851,003 - -0.0 851,051 - -0.2 851,119 + +0.2 851,172 + -0.0 851,228 - -3.3 851,314 - -1.0 851,334 - DVU0760 0.10 +0.2 851,405 - DVU0760 0.17 -0.9 851,435 - DVU0760 0.19 -0.1 851,463 - DVU0760 0.22 -3.3 851,511 + DVU0760 0.26 +1.1 851,518 + DVU0760 0.27 -0.4 851,553 + DVU0760 0.30 -3.4 851,559 + DVU0760 0.30 -3.9 851,610 + DVU0760 0.35 -0.3 851,618 - DVU0760 0.35 -0.3 851,671 + DVU0760 0.40 -0.3 851,679 - DVU0760 0.41 +0.0 851,679 - DVU0760 0.41 +0.8 851,706 + DVU0760 0.43 -0.0 851,828 - DVU0760 0.54 -0.1
Or see this region's nucleotide sequence