Experiment: MoLS4 with L-Glutamine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0298 and DORF4420 are separated by 72 nucleotides DORF4420 and DVU0299 are separated by 178 nucleotides
DVU0298: DVU0298 - hypothetical protein (TIGR), at 344,447 to 345,232
DVU0298
DORF4420: DORF4420 - no description, at 345,305 to 345,463
DORF4420
DVU0299: DVU0299 - anaerobic ribonucleoside-triphosphate reductase, putative (TIGR), at 345,642 to 347,687
DVU0299
Position (kb) 345
346 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 344.328 kb on - strand at 344.330 kb on - strand at 344.350 kb on - strand at 344.350 kb on - strand at 344.360 kb on - strand at 344.385 kb on + strand at 344.424 kb on - strand at 344.430 kb on + strand at 344.477 kb on - strand at 344.501 kb on + strand at 344.591 kb on + strand, within DVU0298 at 344.613 kb on + strand, within DVU0298 at 344.623 kb on + strand, within DVU0298 at 344.631 kb on - strand, within DVU0298 at 344.631 kb on - strand, within DVU0298 at 344.777 kb on + strand, within DVU0298 at 344.829 kb on - strand, within DVU0298 at 344.989 kb on - strand, within DVU0298 at 345.005 kb on + strand, within DVU0298 at 345.058 kb on - strand, within DVU0298 at 345.357 kb on + strand, within DORF4420 at 345.362 kb on + strand, within DORF4420 at 345.365 kb on - strand, within DORF4420 at 345.372 kb on - strand, within DORF4420 at 345.389 kb on - strand, within DORF4420 at 345.402 kb on + strand, within DORF4420 at 345.435 kb on + strand, within DORF4420 at 345.435 kb on + strand, within DORF4420 at 345.558 kb on + strand at 345.622 kb on - strand at 345.918 kb on - strand, within DVU0299 at 345.924 kb on - strand, within DVU0299 at 345.945 kb on - strand, within DVU0299 at 345.960 kb on - strand, within DVU0299 at 345.983 kb on + strand, within DVU0299 at 345.995 kb on + strand, within DVU0299 at 346.038 kb on - strand, within DVU0299 at 346.062 kb on + strand, within DVU0299 at 346.125 kb on - strand, within DVU0299 at 346.178 kb on + strand, within DVU0299 at 346.256 kb on - strand, within DVU0299 at 346.430 kb on - strand, within DVU0299
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine as nutrient 10mM remove 344,328 - +0.3 344,330 - -0.7 344,350 - +1.2 344,350 - -0.8 344,360 - +0.3 344,385 + -2.3 344,424 - -0.4 344,430 + -0.0 344,477 - -0.7 344,501 + -0.7 344,591 + DVU0298 0.18 -0.4 344,613 + DVU0298 0.21 -1.1 344,623 + DVU0298 0.22 +0.4 344,631 - DVU0298 0.23 +3.5 344,631 - DVU0298 0.23 +0.5 344,777 + DVU0298 0.42 -0.5 344,829 - DVU0298 0.49 -0.1 344,989 - DVU0298 0.69 +0.4 345,005 + DVU0298 0.71 -0.1 345,058 - DVU0298 0.78 -2.8 345,357 + DORF4420 0.33 -3.6 345,362 + DORF4420 0.36 +0.1 345,365 - DORF4420 0.38 -0.8 345,372 - DORF4420 0.42 -0.9 345,389 - DORF4420 0.53 -0.2 345,402 + DORF4420 0.61 -0.4 345,435 + DORF4420 0.82 -1.4 345,435 + DORF4420 0.82 +0.6 345,558 + -0.1 345,622 - -0.1 345,918 - DVU0299 0.13 -0.2 345,924 - DVU0299 0.14 -0.3 345,945 - DVU0299 0.15 +0.1 345,960 - DVU0299 0.16 -0.5 345,983 + DVU0299 0.17 +0.2 345,995 + DVU0299 0.17 -0.1 346,038 - DVU0299 0.19 -4.3 346,062 + DVU0299 0.21 +0.3 346,125 - DVU0299 0.24 -0.2 346,178 + DVU0299 0.26 -0.0 346,256 - DVU0299 0.30 -0.1 346,430 - DVU0299 0.39 -0.4
Or see this region's nucleotide sequence