Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31280

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
3,266,535	+		PGA1_c31270	0.77	+0.7
3,266,536	+		PGA1_c31270	0.77	-0.5
3,266,536	+		PGA1_c31270	0.77	+0.4
3,266,543	-		PGA1_c31270	0.77	+0.1
3,266,544	-		PGA1_c31270	0.77	-0.4
3,266,571	-		PGA1_c31270	0.78	+0.9
3,266,571	-		PGA1_c31270	0.78	+0.6
3,266,587	+		PGA1_c31270	0.78	+0.0
3,266,588	+		PGA1_c31270	0.78	+1.2
3,266,595	-		PGA1_c31270	0.78	-0.3
3,266,624	+		PGA1_c31270	0.79	+0.3
3,266,627	-		PGA1_c31270	0.79	-0.1
3,266,701	+		PGA1_c31270	0.81	+0.4
3,266,709	-		PGA1_c31270	0.82	+0.5
3,266,730	+		PGA1_c31270	0.82	-1.6
3,266,735	+		PGA1_c31270	0.82	+1.5
3,266,735	+		PGA1_c31270	0.82	+0.0
3,266,735	+		PGA1_c31270	0.82	+1.7
3,266,740	+		PGA1_c31270	0.82	+0.4
3,266,743	-		PGA1_c31270	0.83	+0.3
3,266,743	-		PGA1_c31270	0.83	-0.1
3,266,747	+		PGA1_c31270	0.83	-0.8
3,266,767	-		PGA1_c31270	0.83	+0.3
3,266,767	-		PGA1_c31270	0.83	+0.4
3,266,795	-		PGA1_c31270	0.84	-0.9
3,266,795	-		PGA1_c31270	0.84	-0.6
3,266,818	+		PGA1_c31270	0.85	-1.2
3,266,822	-		PGA1_c31270	0.85	+0.2
3,266,834	-		PGA1_c31270	0.85	+1.5
3,266,839	-		PGA1_c31270	0.85	-1.3
3,266,908	+		PGA1_c31270	0.87	+0.2
3,266,908	+		PGA1_c31270	0.87	-0.3
3,266,916	-		PGA1_c31270	0.87	+0.2
3,266,916	-		PGA1_c31270	0.87	+0.7
3,266,916	-		PGA1_c31270	0.87	+1.1
3,266,949	+		PGA1_c31270	0.88	+0.9
3,266,981	-		PGA1_c31270	0.89	+2.3
3,267,053	-				-0.1
3,267,069	+				+0.9
3,267,090	-				+1.2
3,267,144	+				-0.8
3,267,162	-				+0.3
3,267,174	+				+0.2
3,267,194	+				+0.7
3,267,202	-				-0.8
3,267,204	+				-1.8
3,267,204	+				+0.5
3,267,208	+				+0.0
3,267,260	-				+1.4
3,267,271	+				-0.2
3,267,271	+				-1.5
3,267,271	+				-0.1
3,267,279	-				+0.7
3,267,279	-				-0.3
3,267,282	+				+0.6
3,267,286	-				-2.1
3,267,308	+				+1.3
3,267,316	-				+1.1
3,267,362	+				+1.1
3,267,399	+				-0.6
3,267,399	+				-0.9
3,267,399	+				+0.3
3,267,399	+				+0.3
3,267,399	+				-0.5
3,267,399	+				-0.8
3,267,399	+				+0.4
3,267,407	-				-2.0
3,267,407	-				-0.7
3,267,407	-				-0.1
3,267,407	-				-0.1
3,267,419	+				-2.0
3,267,498	+				+1.0
3,267,525	+				+0.2
3,267,675	-		PGA1_c31280	0.13	-0.0
3,267,718	+		PGA1_c31280	0.16	+1.3
3,267,726	-		PGA1_c31280	0.17	-0.3
3,267,740	-		PGA1_c31280	0.18	+0.6
3,267,752	+		PGA1_c31280	0.19	-0.3
3,267,758	-		PGA1_c31280	0.19	-1.3
3,267,776	+		PGA1_c31280	0.21	+0.6
3,267,787	+		PGA1_c31280	0.22	-2.3
3,267,807	+		PGA1_c31280	0.23	-0.7
3,267,818	+		PGA1_c31280	0.24	+0.5
3,267,818	+		PGA1_c31280	0.24	-1.2
3,267,837	+		PGA1_c31280	0.25	-0.3
3,267,842	+		PGA1_c31280	0.26	-1.6
3,267,847	+		PGA1_c31280	0.26	-0.5
3,267,850	-		PGA1_c31280	0.26	-2.1
3,267,854	+		PGA1_c31280	0.27	-2.1
3,267,862	-		PGA1_c31280	0.27	-0.3
3,267,862	-		PGA1_c31280	0.27	+0.1
3,267,862	-		PGA1_c31280	0.27	-2.4
3,267,862	-		PGA1_c31280	0.27	-0.8
3,267,911	+		PGA1_c31280	0.31	+0.7
3,267,911	+		PGA1_c31280	0.31	+0.1
3,267,911	+		PGA1_c31280	0.31	+0.4
3,267,911	+		PGA1_c31280	0.31	-0.3
3,267,913	-		PGA1_c31280	0.31	+0.0
3,267,919	-		PGA1_c31280	0.32	+0.6
3,267,919	-		PGA1_c31280	0.32	+0.2
3,267,919	-		PGA1_c31280	0.32	-2.1
3,267,919	-		PGA1_c31280	0.32	+0.2
3,267,919	-		PGA1_c31280	0.32	+0.5
3,267,919	-		PGA1_c31280	0.32	-2.3
3,267,919	-		PGA1_c31280	0.32	-0.1
3,267,919	-		PGA1_c31280	0.32	+1.1
3,267,919	-		PGA1_c31280	0.32	-0.1
3,267,925	+		PGA1_c31280	0.32	-0.3
3,267,971	+		PGA1_c31280	0.35	-0.6
3,267,971	+		PGA1_c31280	0.35	-0.5
3,267,979	-		PGA1_c31280	0.36	-0.7
3,267,979	-		PGA1_c31280	0.36	+0.2
3,267,979	-		PGA1_c31280	0.36	+1.8
3,267,989	+		PGA1_c31280	0.37	-0.8
3,268,032	+		PGA1_c31280	0.40	-0.4
3,268,032	+		PGA1_c31280	0.40	-1.7
3,268,032	+		PGA1_c31280	0.40	-0.4
3,268,032	+		PGA1_c31280	0.40	+0.3
3,268,040	-		PGA1_c31280	0.41	+1.7
3,268,040	-		PGA1_c31280	0.41	-1.5
3,268,040	-		PGA1_c31280	0.41	+1.0
3,268,042	-		PGA1_c31280	0.41	+0.7
3,268,053	+		PGA1_c31280	0.42	-1.4
3,268,096	+		PGA1_c31280	0.45	-0.7
3,268,101	+		PGA1_c31280	0.45	+0.3
3,268,124	-		PGA1_c31280	0.47	-0.3
3,268,134	-		PGA1_c31280	0.48	-0.5
3,268,134	-		PGA1_c31280	0.48	+0.7
3,268,146	-		PGA1_c31280	0.49	-0.4
3,268,158	-		PGA1_c31280	0.50	+1.7
3,268,164	-		PGA1_c31280	0.50	-0.4
3,268,165	-		PGA1_c31280	0.50	-0.4
3,268,165	-		PGA1_c31280	0.50	+1.1
3,268,165	-		PGA1_c31280	0.50	-1.1
3,268,178	-		PGA1_c31280	0.51	-0.3
3,268,194	+		PGA1_c31280	0.52	-1.3
3,268,232	+		PGA1_c31280	0.55	-0.2
3,268,246	-		PGA1_c31280	0.56	-0.4
3,268,246	-		PGA1_c31280	0.56	-0.5
3,268,298	+		PGA1_c31280	0.60	-0.3
3,268,306	-		PGA1_c31280	0.61	-0.4
3,268,310	+		PGA1_c31280	0.61	+0.8
3,268,362	+		PGA1_c31280	0.65	-1.5
3,268,372	+		PGA1_c31280	0.66	-0.5
3,268,395	-		PGA1_c31280	0.68	-0.9
3,268,395	-		PGA1_c31280	0.68	+2.0
3,268,431	-		PGA1_c31280	0.70	-1.1
3,268,431	-		PGA1_c31280	0.70	+1.5
3,268,459	+		PGA1_c31280	0.72	+1.0
3,268,462	-		PGA1_c31280	0.73	-0.3
3,268,541	+		PGA1_c31280	0.79	-0.8
3,268,560	-		PGA1_c31280	0.80	-0.4
3,268,571	+		PGA1_c31280	0.81	-0.2
3,268,571	-		PGA1_c31280	0.81	+0.5
3,268,593	+		PGA1_c31280	0.83	-1.1
3,268,644	-		PGA1_c31280	0.86	-0.6
3,268,655	-		PGA1_c31280	0.87	-0.3
3,268,684	-		PGA1_c31280	0.89	-1.8
3,268,710	-				-0.2
3,268,718	+				-1.7
3,268,725	+				+0.1
3,268,726	-				+0.2
3,268,844	+				+0.3
3,268,864	+				+0.2
3,268,878	+				+1.0
3,268,883	-				-1.3
3,268,886	-				+3.1
3,268,886	-				+1.2
3,268,970	-		PGA1_c31290	0.16	+3.1
3,269,034	+		PGA1_c31290	0.23	-0.6
3,269,034	+		PGA1_c31290	0.23	+0.9
3,269,039	+		PGA1_c31290	0.24	-0.7
3,269,051	-		PGA1_c31290	0.25	-0.5
3,269,053	+		PGA1_c31290	0.25	+0.0
3,269,116	-		PGA1_c31290	0.32	-0.3
3,269,124	-		PGA1_c31290	0.33	-1.4
3,269,126	+		PGA1_c31290	0.33	-0.3
3,269,132	+		PGA1_c31290	0.34	-0.3
3,269,134	-		PGA1_c31290	0.34	+0.3
3,269,134	-		PGA1_c31290	0.34	+0.3
3,269,188	+		PGA1_c31290	0.40	-0.6
3,269,188	+		PGA1_c31290	0.40	-0.5
3,269,196	-		PGA1_c31290	0.41	-0.5
3,269,196	-		PGA1_c31290	0.41	-0.3
3,269,198	+		PGA1_c31290	0.41	+0.7
3,269,200	+		PGA1_c31290	0.41	+0.3
3,269,200	+		PGA1_c31290	0.41	+0.3
3,269,200	+		PGA1_c31290	0.41	-0.8
3,269,200	+		PGA1_c31290	0.41	+0.7
3,269,208	-		PGA1_c31290	0.42	+0.3
3,269,208	-		PGA1_c31290	0.42	-0.2
3,269,208	-		PGA1_c31290	0.42	+1.3
3,269,208	-		PGA1_c31290	0.42	-0.6
3,269,208	-		PGA1_c31290	0.42	-1.0
3,269,208	-		PGA1_c31290	0.42	-0.6
3,269,249	+		PGA1_c31290	0.47	-0.6
3,269,249	+		PGA1_c31290	0.47	-0.1
3,269,259	+		PGA1_c31290	0.48	+1.0
3,269,267	-		PGA1_c31290	0.49	+0.2
3,269,267	-		PGA1_c31290	0.49	+1.7
3,269,272	-		PGA1_c31290	0.49	-1.3
3,269,272	-		PGA1_c31290	0.49	+0.7
3,269,279	+		PGA1_c31290	0.50	-0.5
3,269,287	-		PGA1_c31290	0.51	-1.9
3,269,316	+		PGA1_c31290	0.54	-0.3
3,269,316	+		PGA1_c31290	0.54	-0.6
3,269,316	+		PGA1_c31290	0.54	-0.3
3,269,316	+		PGA1_c31290	0.54	+0.4
3,269,316	+		PGA1_c31290	0.54	+0.1
3,269,316	+		PGA1_c31290	0.54	+1.2
3,269,316	+		PGA1_c31290	0.54	+0.8
3,269,316	+		PGA1_c31290	0.54	+0.3
3,269,316	+		PGA1_c31290	0.54	-1.1
3,269,316	+		PGA1_c31290	0.54	+0.5
3,269,316	+		PGA1_c31290	0.54	+0.2
3,269,316	+		PGA1_c31290	0.54	+0.9
3,269,316	+		PGA1_c31290	0.54	-1.3
3,269,316	+		PGA1_c31290	0.54	+0.0
3,269,316	+		PGA1_c31290	0.54	+1.2
3,269,324	-		PGA1_c31290	0.55	+0.5
3,269,324	-		PGA1_c31290	0.55	-0.8
3,269,324	-		PGA1_c31290	0.55	+2.3
3,269,324	-		PGA1_c31290	0.55	-0.2
3,269,324	-		PGA1_c31290	0.55	+1.3
3,269,324	-		PGA1_c31290	0.55	-0.5
3,269,324	-		PGA1_c31290	0.55	+0.6
3,269,398	-		PGA1_c31290	0.63	+0.6
3,269,435	+		PGA1_c31290	0.67	+0.7
3,269,438	-		PGA1_c31290	0.67	-1.3
3,269,438	-		PGA1_c31290	0.67	-0.7
3,269,438	-		PGA1_c31290	0.67	+0.3
3,269,438	-		PGA1_c31290	0.67	-0.1
3,269,438	-		PGA1_c31290	0.67	+0.2
3,269,445	+		PGA1_c31290	0.68	-0.4
3,269,445	+		PGA1_c31290	0.68	+0.7
3,269,445	+		PGA1_c31290	0.68	+1.3
3,269,445	+		PGA1_c31290	0.68	-2.0
3,269,453	-		PGA1_c31290	0.69	+0.7
3,269,453	-		PGA1_c31290	0.69	-0.4
3,269,453	-		PGA1_c31290	0.69	-0.8
3,269,453	-		PGA1_c31290	0.69	-1.7
3,269,453	-		PGA1_c31290	0.69	+0.2
3,269,453	-		PGA1_c31290	0.69	+0.4
3,269,453	-		PGA1_c31290	0.69	-0.4
3,269,459	+		PGA1_c31290	0.69	-1.7
3,269,459	+		PGA1_c31290	0.69	+0.7
3,269,459	+		PGA1_c31290	0.69	-0.2
3,269,467	-		PGA1_c31290	0.70	+0.9
3,269,467	-		PGA1_c31290	0.70	+0.9
3,269,490	+		PGA1_c31290	0.73	-1.7
3,269,498	-		PGA1_c31290	0.74	-0.9
3,269,506	-		PGA1_c31290	0.75	+0.3
3,269,509	-		PGA1_c31290	0.75	-2.1
3,269,509	-		PGA1_c31290	0.75	-0.2
3,269,514	-		PGA1_c31290	0.75	+1.3
3,269,514	-		PGA1_c31290	0.75	-0.2
3,269,533	+		PGA1_c31290	0.78	+0.4
3,269,564	-		PGA1_c31290	0.81	-0.2
3,269,564	-		PGA1_c31290	0.81	-1.8
3,269,566	-		PGA1_c31290	0.81	+0.1
3,269,598	+		PGA1_c31290	0.85	-0.2
3,269,652	-				+0.0
3,269,657	+				+0.1
3,269,657	+				-0.6
3,269,670	-				+1.1
3,269,694	+				+0.1
3,269,694	+				-0.3
3,269,694	+				+0.7
3,269,694	+				-0.2
3,269,694	+				-1.6
3,269,694	+				+0.2
3,269,694	+				-0.3
3,269,694	+				-1.1
3,269,694	+				+0.3
3,269,694	+				+0.7
3,269,697	-				-0.2
3,269,697	-				-0.3
3,269,697	-				-0.4
3,269,697	-				+0.7
3,269,702	-				+0.2
3,269,702	-				-0.3
3,269,702	-				+0.1
3,269,702	-				-0.3
3,269,702	-				-0.5
3,269,702	-				+0.4
3,269,740	+				+1.3
3,269,740	+				+0.5
3,269,741	+				-0.1
3,269,748	-				-0.0
3,269,749	-				+0.5
3,269,749	-				+0.6
3,269,749	-				-2.3
3,269,749	-				+0.7
3,269,749	-				-0.8
3,269,750	+				-2.3
3,269,754	-				-1.2
3,269,758	-				-0.5
3,269,775	-				+0.9
3,269,775	-				+0.2
3,269,822	-				+0.4