Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22940

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
2,374,619	-		PGA1_c22920	0.21	-1.4
2,374,620	-		PGA1_c22920	0.22	-1.2
2,374,625	-		PGA1_c22920	0.22	+0.0
2,374,765	-		PGA1_c22920	0.36	+0.5
2,374,766	-		PGA1_c22920	0.36	+1.1
2,374,891	+		PGA1_c22920	0.49	-0.6
2,374,930	-		PGA1_c22920	0.53	+0.1
2,375,018	-		PGA1_c22920	0.62	+0.8
2,375,018	-		PGA1_c22920	0.62	+0.3
2,375,057	+		PGA1_c22920	0.65	-0.1
2,375,065	-		PGA1_c22920	0.66	-0.7
2,375,075	+		PGA1_c22920	0.67	+1.2
2,375,075	+		PGA1_c22920	0.67	+0.4
2,375,075	+		PGA1_c22920	0.67	+0.6
2,375,075	+		PGA1_c22920	0.67	-1.0
2,375,083	-		PGA1_c22920	0.68	-0.2
2,375,083	-		PGA1_c22920	0.68	+1.3
2,375,083	-		PGA1_c22920	0.68	-0.8
2,375,083	-		PGA1_c22920	0.68	+1.1
2,375,096	-				+1.8
2,375,142	-		PGA1_c22920	0.74	+0.3
2,375,151	-		PGA1_c22920	0.75	+0.2
2,375,264	+		PGA1_c22920	0.86	+1.0
2,375,307	+				-1.1
2,375,307	+				-0.8
2,375,315	-				-1.5
2,375,315	-				+1.5
2,375,383	-				-1.4
2,375,406	+				+0.1
2,375,406	+				-0.4
2,375,414	-		PGA1_c22930	0.12	+1.4
2,375,416	+		PGA1_c22930	0.13	+1.5
2,375,416	+		PGA1_c22930	0.13	+1.9
2,375,416	+		PGA1_c22930	0.13	+0.2
2,375,416	+		PGA1_c22930	0.13	+0.0
2,375,416	+		PGA1_c22930	0.13	+0.2
2,375,416	+		PGA1_c22930	0.13	-1.9
2,375,424	-		PGA1_c22930	0.18	+1.0
2,375,424	-		PGA1_c22930	0.18	-1.0
2,375,424	-		PGA1_c22930	0.18	-1.3
2,375,424	-		PGA1_c22930	0.18	-0.2
2,375,424	-		PGA1_c22930	0.18	+0.4
2,375,424	-		PGA1_c22930	0.18	-0.8
2,375,454	-		PGA1_c22930	0.34	-0.3
2,375,459	-		PGA1_c22930	0.37	+2.0
2,375,486	+		PGA1_c22930	0.53	+1.8
2,375,491	+		PGA1_c22930	0.55	+1.0
2,375,494	-		PGA1_c22930	0.57	+1.1
2,375,652	-				+1.0
2,375,652	-				-1.0
2,375,652	-				+2.4
2,375,652	-				-0.2
2,375,661	-				+0.1
2,375,684	-				+0.2
2,375,770	+		PGA1_c22940	0.18	-0.6
2,375,832	-		PGA1_c22940	0.24	-1.0
2,375,837	-		PGA1_c22940	0.25	-0.2
2,375,903	-		PGA1_c22940	0.31	-0.6
2,375,935	+		PGA1_c22940	0.35	-1.6
2,375,939	+		PGA1_c22940	0.35	+0.1
2,375,978	-		PGA1_c22940	0.39	-0.7
2,376,003	+		PGA1_c22940	0.41	-0.6
2,376,010	+		PGA1_c22940	0.42	-2.2
2,376,018	-		PGA1_c22940	0.43	+0.8
2,376,018	-		PGA1_c22940	0.43	-1.0
2,376,018	-		PGA1_c22940	0.43	-0.8
2,376,018	-		PGA1_c22940	0.43	+0.4
2,376,018	-		PGA1_c22940	0.43	+0.9
2,376,058	+		PGA1_c22940	0.47	-1.0
2,376,070	+		PGA1_c22940	0.48	-0.1
2,376,070	+		PGA1_c22940	0.48	-1.0
2,376,070	+		PGA1_c22940	0.48	-0.0
2,376,070	+		PGA1_c22940	0.48	+0.2
2,376,070	+		PGA1_c22940	0.48	-0.2
2,376,078	-		PGA1_c22940	0.49	+0.8
2,376,078	-		PGA1_c22940	0.49	-0.2
2,376,078	-		PGA1_c22940	0.49	-0.7
2,376,110	+		PGA1_c22940	0.52	-0.7
2,376,110	+		PGA1_c22940	0.52	+0.8
2,376,157	+		PGA1_c22940	0.57	-0.7
2,376,157	+		PGA1_c22940	0.57	-0.4
2,376,177	+		PGA1_c22940	0.59	-2.2
2,376,189	+		PGA1_c22940	0.60	-1.7
2,376,199	-		PGA1_c22940	0.61	-1.2
2,376,241	+		PGA1_c22940	0.65	-0.7
2,376,243	-		PGA1_c22940	0.65	-0.6
2,376,304	+		PGA1_c22940	0.71	+1.1
2,376,447	-		PGA1_c22940	0.86	+0.4
2,376,449	+		PGA1_c22940	0.86	-1.3
2,376,466	-		PGA1_c22940	0.88	+0.4
2,376,477	+		PGA1_c22940	0.89	+0.3
2,376,477	+		PGA1_c22940	0.89	-0.7
2,376,541	-				+0.3
2,376,550	+				-0.9
2,376,558	-				+0.2
2,376,558	-				+0.3
2,376,558	-				-0.5
2,376,616	+				+2.4
2,376,630	+				+0.0
2,376,638	-				-0.2
2,376,671	+				-0.0
2,376,673	-				+0.4
2,376,681	+				-0.2
2,376,681	+				+0.3
2,376,681	+				+0.1
2,376,681	+				+0.1
2,376,681	+				+1.2
2,376,688	+				+1.1
2,376,688	+				-0.4
2,376,689	-				+0.2
2,376,689	-				+0.5
2,376,689	-				+0.5
2,376,689	-				-0.2
2,376,689	-				-1.2
2,376,689	-				-1.0
2,376,689	-				-0.2
2,376,689	-				-0.7
2,376,696	-				+1.5
2,376,702	+				+0.4
2,376,707	+				-0.2
2,376,707	+				-0.5
2,376,713	+				+0.6
2,376,713	+				-2.3
2,376,713	+				+0.3
2,376,715	-				-1.0
2,376,723	+				-0.6
2,376,723	+				+0.4
2,376,726	+				+1.0
2,376,731	-				-0.3
2,376,748	-				+0.4
2,376,761	+				-0.8
2,376,761	+				-0.9
2,376,840	-				+2.6
2,376,863	-				-0.2
2,376,865	+				+0.9
2,376,865	+				-0.5
2,376,865	+				-0.9
2,376,865	+				-1.5
2,376,865	+				+0.4
2,376,865	+				+0.6
2,376,865	+				-1.7
2,376,865	+				+0.5
2,376,873	-				+1.4
2,376,873	-				-0.2
2,376,873	-				+0.9
2,376,875	+				+0.2
2,376,879	-				-0.0
2,376,887	+				+0.0
2,376,895	-				+0.8
2,376,897	+				+0.3
2,376,902	+				+0.3
2,376,910	-				+2.4
2,376,910	-				-0.8
2,376,927	-				-0.8
2,376,974	-				-0.8
2,377,010	+				-0.6
2,377,010	+				-0.6
2,377,010	+				-1.2
2,377,011	-				+0.6
2,377,013	+				+0.8
2,377,018	+				-0.4
2,377,018	-				+0.1
2,377,018	-				+1.4
2,377,024	+				+0.6
2,377,031	-				-0.2
2,377,032	-				+0.2
2,377,112	+				-1.6
2,377,112	+				+1.9
2,377,120	-				+0.0
2,377,164	-				-2.7
2,377,179	+				+0.8
2,377,226	-				+0.2
2,377,264	-				-2.0
2,377,276	-				-0.1
2,377,300	+				-0.2
2,377,334	-				-0.4
2,377,433	-		PGA1_c22950	0.15	-0.7
2,377,450	+		PGA1_c22950	0.16	+0.1
2,377,460	+		PGA1_c22950	0.17	-0.7
2,377,500	-		PGA1_c22950	0.19	-1.3
2,377,537	-		PGA1_c22950	0.21	+0.0
2,377,546	-		PGA1_c22950	0.22	+0.4