Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14590

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
1,512,393	-		PGA1_c14580	0.22	+0.5
1,512,393	-		PGA1_c14580	0.22	-0.2
1,512,424	+		PGA1_c14580	0.25	-0.8
1,512,424	+		PGA1_c14580	0.25	+2.4
1,512,426	-		PGA1_c14580	0.25	-0.4
1,512,432	-		PGA1_c14580	0.25	+1.2
1,512,432	-		PGA1_c14580	0.25	-0.6
1,512,457	+		PGA1_c14580	0.28	+0.5
1,512,465	-		PGA1_c14580	0.28	+0.1
1,512,465	-		PGA1_c14580	0.28	+2.8
1,512,465	-		PGA1_c14580	0.28	-1.3
1,512,465	-		PGA1_c14580	0.28	-0.2
1,512,465	-		PGA1_c14580	0.28	-0.8
1,512,512	+		PGA1_c14580	0.32	+1.5
1,512,517	+		PGA1_c14580	0.33	+0.2
1,512,525	-		PGA1_c14580	0.34	+2.1
1,512,525	-		PGA1_c14580	0.34	-1.5
1,512,525	-		PGA1_c14580	0.34	-1.4
1,512,574	+		PGA1_c14580	0.38	+1.0
1,512,574	+		PGA1_c14580	0.38	-0.0
1,512,582	-		PGA1_c14580	0.39	+1.2
1,512,582	-		PGA1_c14580	0.39	+0.8
1,512,597	+		PGA1_c14580	0.40	-0.6
1,512,597	+		PGA1_c14580	0.40	-1.2
1,512,597	+		PGA1_c14580	0.40	+0.6
1,512,605	-		PGA1_c14580	0.41	-1.4
1,512,605	-		PGA1_c14580	0.41	-0.8
1,512,605	-		PGA1_c14580	0.41	+0.5
1,512,605	-		PGA1_c14580	0.41	+1.1
1,512,605	-		PGA1_c14580	0.41	+1.1
1,512,652	+		PGA1_c14580	0.45	-1.7
1,512,660	-		PGA1_c14580	0.45	-1.4
1,512,683	+		PGA1_c14580	0.47	+0.4
1,512,683	+		PGA1_c14580	0.47	+0.0
1,512,683	+		PGA1_c14580	0.47	-1.3
1,512,691	-		PGA1_c14580	0.48	-0.2
1,512,691	-		PGA1_c14580	0.48	-1.0
1,512,691	-		PGA1_c14580	0.48	+1.1
1,512,729	+		PGA1_c14580	0.51	+0.1
1,512,972	+		PGA1_c14580	0.73	+0.0
1,512,980	-		PGA1_c14580	0.73	-0.2
1,512,980	-		PGA1_c14580	0.73	+0.2
1,512,980	-		PGA1_c14580	0.73	-0.7
1,512,980	-		PGA1_c14580	0.73	+0.6
1,512,980	-		PGA1_c14580	0.73	+0.3
1,512,980	-		PGA1_c14580	0.73	-0.6
1,512,980	-		PGA1_c14580	0.73	+0.3
1,513,009	-		PGA1_c14580	0.76	-0.4
1,513,043	-		PGA1_c14580	0.79	-0.5
1,513,135	+		PGA1_c14580	0.87	+0.6
1,513,135	+		PGA1_c14580	0.87	-1.4
1,513,234	-				-0.7
1,513,297	+				+0.5
1,513,297	+				+0.1
1,513,297	+				-0.8
1,513,297	+				-0.3
1,513,302	+				+0.5
1,513,305	-				-0.6
1,513,305	-				+0.2
1,513,305	-				-0.5
1,513,408	-				+1.5
1,513,408	-				+0.1
1,513,500	+		PGA1_c14590	0.12	+1.1
1,513,629	+		PGA1_c14590	0.26	+0.2
1,513,689	+		PGA1_c14590	0.33	-0.4
1,513,701	-		PGA1_c14590	0.34	-0.2
1,513,734	+		PGA1_c14590	0.38	+0.1
1,513,749	+		PGA1_c14590	0.39	+0.9
1,513,749	+		PGA1_c14590	0.39	+1.5
1,513,752	-		PGA1_c14590	0.40	+0.1
1,513,757	-		PGA1_c14590	0.40	+0.7
1,513,757	-		PGA1_c14590	0.40	-0.9
1,513,757	-		PGA1_c14590	0.40	+2.1
1,513,781	+		PGA1_c14590	0.43	+1.1
1,513,815	+		PGA1_c14590	0.47	-2.8
1,513,818	-		PGA1_c14590	0.47	-1.5
1,513,853	-		PGA1_c14590	0.51	-0.0
1,513,853	-		PGA1_c14590	0.51	+0.2
1,513,965	-		PGA1_c14590	0.63	+0.0
1,513,977	-		PGA1_c14590	0.65	+1.2
1,513,987	-		PGA1_c14590	0.66	+0.5
1,514,079	+		PGA1_c14590	0.76	+1.0
1,514,101	-		PGA1_c14590	0.78	-1.2
1,514,101	-		PGA1_c14590	0.78	+0.8
1,514,122	+		PGA1_c14590	0.81	+0.8
1,514,148	+		PGA1_c14590	0.84	+0.5
1,514,164	-		PGA1_c14590	0.85	-2.5
1,514,199	-		PGA1_c14590	0.89	+0.3
1,514,218	+				-1.5
1,514,238	-				-0.7
1,514,257	+				+0.5
1,514,321	+				+1.2
1,514,329	-				-0.6
1,514,348	+				-1.3
1,514,371	+				+1.2
1,514,371	+				+0.8
1,514,371	+				-0.4
1,514,379	-				+0.1
1,514,379	-				-0.4
1,514,379	-				-0.2
1,514,379	-				-0.5
1,514,379	-				+0.8
1,514,379	-				+1.5
1,514,388	+				+0.3
1,514,427	-				-0.4
1,514,429	+				+1.6
1,514,437	-				-0.8
1,514,437	-				-1.2
1,514,439	+				-0.0
1,514,447	-				+0.1
1,514,447	-				-0.7
1,514,447	-				+1.0
1,514,447	-				-0.0
1,514,480	+				+0.6
1,514,485	+				+0.5
1,514,485	+				-0.8
1,514,493	-				+0.8
1,514,493	-				+0.6
1,514,504	-				-1.1
1,514,524	+				+0.1
1,514,538	+				+0.7
1,514,582	+		PGA1_c14600	0.11	-0.2
1,514,665	-		PGA1_c14600	0.17	-1.2
1,514,667	+		PGA1_c14600	0.17	+0.3
1,514,667	+		PGA1_c14600	0.17	-2.4
1,514,667	+		PGA1_c14600	0.17	+0.0
1,514,667	+		PGA1_c14600	0.17	-0.4
1,514,667	+		PGA1_c14600	0.17	+0.1
1,514,667	+		PGA1_c14600	0.17	+1.3
1,514,667	+		PGA1_c14600	0.17	+0.5
1,514,667	+		PGA1_c14600	0.17	+0.2
1,514,667	+		PGA1_c14600	0.17	-1.0
1,514,667	+		PGA1_c14600	0.17	+0.2
1,514,667	+		PGA1_c14600	0.17	+0.4
1,514,667	+		PGA1_c14600	0.17	+0.5
1,514,667	+		PGA1_c14600	0.17	+0.8
1,514,675	-		PGA1_c14600	0.17	-0.1
1,514,675	-		PGA1_c14600	0.17	+0.1
1,514,675	-		PGA1_c14600	0.17	+2.4
1,514,675	-		PGA1_c14600	0.17	-0.2
1,514,675	-		PGA1_c14600	0.17	+0.2
1,514,675	-		PGA1_c14600	0.17	-0.2
1,514,687	+		PGA1_c14600	0.18	-0.6
1,514,692	+		PGA1_c14600	0.18	-0.8
1,514,704	+		PGA1_c14600	0.19	+0.3
1,514,790	-		PGA1_c14600	0.24	+0.6
1,514,790	-		PGA1_c14600	0.24	-1.1
1,514,790	-		PGA1_c14600	0.24	+0.6
1,514,804	+		PGA1_c14600	0.25	-1.8
1,514,818	+		PGA1_c14600	0.26	+0.2
1,514,875	+		PGA1_c14600	0.30	-0.6
1,514,924	+		PGA1_c14600	0.33	+0.5
1,514,924	+		PGA1_c14600	0.33	-0.9
1,514,924	+		PGA1_c14600	0.33	+0.3
1,514,934	+		PGA1_c14600	0.34	-0.6
1,514,934	+		PGA1_c14600	0.34	-0.1
1,514,939	+		PGA1_c14600	0.34	-1.3
1,514,941	+		PGA1_c14600	0.34	-0.2
1,514,941	+		PGA1_c14600	0.34	+0.5
1,514,942	-		PGA1_c14600	0.34	-0.4
1,515,016	-		PGA1_c14600	0.39	+0.7
1,515,050	+		PGA1_c14600	0.41	-0.2
1,515,068	+		PGA1_c14600	0.42	-0.5
1,515,092	+		PGA1_c14600	0.44	+1.1
1,515,097	+		PGA1_c14600	0.44	-1.1
1,515,097	+		PGA1_c14600	0.44	+0.1
1,515,176	-		PGA1_c14600	0.49	+1.8
1,515,184	+		PGA1_c14600	0.49	+0.0
1,515,196	-		PGA1_c14600	0.50	-1.3
1,515,217	+		PGA1_c14600	0.51	+0.3
1,515,234	+		PGA1_c14600	0.52	-3.0
1,515,242	-		PGA1_c14600	0.53	-1.1
1,515,242	-		PGA1_c14600	0.53	+0.1