Experiment: D-Glucose 20 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26340 and BWI76_RS26345 overlap by 4 nucleotides BWI76_RS26345 and BWI76_RS26350 are separated by 60 nucleotides BWI76_RS26350 and BWI76_RS26355 are separated by 153 nucleotides BWI76_RS26355 and BWI76_RS26360 are separated by 31 nucleotides
BWI76_RS26340: BWI76_RS26340 - branched-chain amino acid ABC transporter permease, at 5,452,093 to 5,453,373
_RS26340
BWI76_RS26345: BWI76_RS26345 - branched-chain amino acid ABC transporter permease LivH, at 5,453,370 to 5,454,296
_RS26345
BWI76_RS26350: BWI76_RS26350 - branched chain amino acid ABC transporter substrate-binding protein, at 5,454,357 to 5,455,466
_RS26350
BWI76_RS26355: BWI76_RS26355 - hypothetical protein, at 5,455,620 to 5,455,855
_RS26355
BWI76_RS26360: BWI76_RS26360 - aspartate 1-decarboxylase autocleavage activator PanM, at 5,455,887 to 5,456,273
_RS26360
Position (kb) 5454
5455
5456 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 5453.394 kb on + strand at 5453.556 kb on - strand, within BWI76_RS26345 at 5453.622 kb on - strand, within BWI76_RS26345 at 5453.889 kb on - strand, within BWI76_RS26345 at 5453.955 kb on + strand, within BWI76_RS26345 at 5453.973 kb on - strand, within BWI76_RS26345 at 5454.161 kb on - strand, within BWI76_RS26345 at 5454.243 kb on - strand at 5454.253 kb on - strand at 5454.292 kb on + strand at 5454.292 kb on + strand at 5454.370 kb on + strand at 5454.609 kb on + strand, within BWI76_RS26350 at 5454.639 kb on + strand, within BWI76_RS26350 at 5454.691 kb on + strand, within BWI76_RS26350 at 5454.691 kb on + strand, within BWI76_RS26350 at 5454.691 kb on + strand, within BWI76_RS26350 at 5454.711 kb on + strand, within BWI76_RS26350 at 5454.837 kb on + strand, within BWI76_RS26350 at 5454.926 kb on - strand, within BWI76_RS26350 at 5455.090 kb on - strand, within BWI76_RS26350 at 5455.170 kb on - strand, within BWI76_RS26350 at 5455.229 kb on + strand, within BWI76_RS26350 at 5455.248 kb on + strand, within BWI76_RS26350 at 5455.349 kb on + strand, within BWI76_RS26350 at 5455.492 kb on - strand at 5455.552 kb on + strand at 5455.770 kb on + strand, within BWI76_RS26355 at 5455.770 kb on + strand, within BWI76_RS26355 at 5455.775 kb on + strand, within BWI76_RS26355 at 5455.778 kb on - strand, within BWI76_RS26355 at 5455.783 kb on - strand, within BWI76_RS26355 at 5455.924 kb on - strand at 5455.924 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C) remove 5,453,394 + +0.5 5,453,556 - BWI76_RS26345 0.20 +0.6 5,453,622 - BWI76_RS26345 0.27 +1.4 5,453,889 - BWI76_RS26345 0.56 +0.3 5,453,955 + BWI76_RS26345 0.63 +0.2 5,453,973 - BWI76_RS26345 0.65 +0.1 5,454,161 - BWI76_RS26345 0.85 +4.3 5,454,243 - -1.2 5,454,253 - +1.0 5,454,292 + +1.5 5,454,292 + +0.0 5,454,370 + +0.6 5,454,609 + BWI76_RS26350 0.23 +0.5 5,454,639 + BWI76_RS26350 0.25 +1.5 5,454,691 + BWI76_RS26350 0.30 +2.7 5,454,691 + BWI76_RS26350 0.30 +0.2 5,454,691 + BWI76_RS26350 0.30 -0.8 5,454,711 + BWI76_RS26350 0.32 +0.7 5,454,837 + BWI76_RS26350 0.43 -0.7 5,454,926 - BWI76_RS26350 0.51 +0.8 5,455,090 - BWI76_RS26350 0.66 -1.1 5,455,170 - BWI76_RS26350 0.73 -1.1 5,455,229 + BWI76_RS26350 0.79 +0.5 5,455,248 + BWI76_RS26350 0.80 +0.9 5,455,349 + BWI76_RS26350 0.89 -0.1 5,455,492 - +1.5 5,455,552 + +0.1 5,455,770 + BWI76_RS26355 0.64 +0.6 5,455,770 + BWI76_RS26355 0.64 +1.6 5,455,775 + BWI76_RS26355 0.66 -0.7 5,455,778 - BWI76_RS26355 0.67 +0.5 5,455,783 - BWI76_RS26355 0.69 +0.6 5,455,924 - +0.3 5,455,924 - -0.4
Or see this region's nucleotide sequence