Experiment: fumarate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0734 and SO0735 are separated by 1 nucleotides SO0735 and SO0736 are separated by 14 nucleotides SO0736 and SO0737 are separated by 297 nucleotides
SO0734: SO0734 - conserved hypothetical protein (NCBI ptt file), at 749,154 to 749,510
SO0734
SO0735: SO0735 - hypothetical protein (NCBI ptt file), at 749,512 to 750,462
SO0735
SO0736: SO0736 - conserved hypothetical protein (NCBI ptt file), at 750,477 to 751,271
SO0736
SO0737: SO0737 - TonB-dependent receptor, putative (NCBI ptt file), at 751,569 to 753,647
SO0737
Position (kb) 750
751
752 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 749.647 kb on - strand, within SO0735 at 749.786 kb on + strand, within SO0735 at 749.810 kb on + strand, within SO0735 at 749.828 kb on - strand, within SO0735 at 749.894 kb on + strand, within SO0735 at 749.943 kb on + strand, within SO0735 at 749.943 kb on + strand, within SO0735 at 749.951 kb on - strand, within SO0735 at 749.951 kb on - strand, within SO0735 at 749.951 kb on - strand, within SO0735 at 749.951 kb on - strand, within SO0735 at 749.951 kb on - strand, within SO0735 at 750.010 kb on + strand, within SO0735 at 750.091 kb on + strand, within SO0735 at 750.164 kb on + strand, within SO0735 at 750.164 kb on + strand, within SO0735 at 750.172 kb on - strand, within SO0735 at 750.200 kb on + strand, within SO0735 at 750.222 kb on + strand, within SO0735 at 750.222 kb on + strand, within SO0735 at 750.222 kb on + strand, within SO0735 at 750.222 kb on + strand, within SO0735 at 750.222 kb on + strand, within SO0735 at 750.224 kb on - strand, within SO0735 at 750.230 kb on - strand, within SO0735 at 750.230 kb on - strand, within SO0735 at 750.230 kb on - strand, within SO0735 at 750.258 kb on + strand, within SO0735 at 750.258 kb on + strand, within SO0735 at 750.377 kb on + strand at 750.377 kb on + strand at 750.377 kb on + strand at 750.385 kb on - strand at 750.387 kb on + strand at 750.457 kb on + strand at 750.463 kb on - strand at 750.565 kb on + strand, within SO0736 at 750.565 kb on + strand, within SO0736 at 750.565 kb on + strand, within SO0736 at 750.573 kb on - strand, within SO0736 at 750.615 kb on + strand, within SO0736 at 750.629 kb on - strand, within SO0736 at 750.747 kb on + strand, within SO0736 at 750.768 kb on + strand, within SO0736 at 750.838 kb on + strand, within SO0736 at 750.838 kb on + strand, within SO0736 at 750.846 kb on - strand, within SO0736 at 750.848 kb on - strand, within SO0736 at 750.997 kb on + strand, within SO0736 at 751.193 kb on - strand at 751.198 kb on - strand at 751.297 kb on + strand at 751.297 kb on + strand at 751.305 kb on - strand at 751.305 kb on - strand at 751.305 kb on - strand at 751.308 kb on - strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.356 kb on + strand at 751.364 kb on - strand at 751.364 kb on - strand at 751.366 kb on - strand at 751.568 kb on + strand at 751.587 kb on + strand at 751.587 kb on + strand at 751.628 kb on + strand at 751.638 kb on - strand at 751.662 kb on + strand at 751.698 kb on - strand at 751.833 kb on + strand, within SO0737 at 751.833 kb on + strand, within SO0737 at 751.833 kb on + strand, within SO0737 at 751.841 kb on - strand, within SO0737 at 751.841 kb on - strand, within SO0737 at 751.858 kb on - strand, within SO0737 at 751.879 kb on + strand, within SO0737 at 751.879 kb on + strand, within SO0737 at 751.879 kb on + strand, within SO0737 at 751.885 kb on + strand, within SO0737 at 751.885 kb on + strand, within SO0737 at 751.939 kb on + strand, within SO0737 at 751.964 kb on - strand, within SO0737 at 751.964 kb on - strand, within SO0737 at 751.969 kb on - strand, within SO0737 at 752.075 kb on - strand, within SO0737 at 752.116 kb on + strand, within SO0737 at 752.124 kb on - strand, within SO0737 at 752.124 kb on - strand, within SO0737 at 752.124 kb on - strand, within SO0737 at 752.124 kb on - strand, within SO0737 at 752.124 kb on - strand, within SO0737 at 752.124 kb on - strand, within SO0737 at 752.124 kb on - strand, within SO0737 at 752.149 kb on - strand, within SO0737 at 752.169 kb on + strand, within SO0737 at 752.177 kb on - strand, within SO0737
Per-strain Table
Position Strand Gene LocusTag Fraction fumarate electron acceptor remove 749,647 - SO0735 0.14 +1.3 749,786 + SO0735 0.29 -0.6 749,810 + SO0735 0.31 +0.4 749,828 - SO0735 0.33 +0.6 749,894 + SO0735 0.40 -0.2 749,943 + SO0735 0.45 -0.7 749,943 + SO0735 0.45 +0.4 749,951 - SO0735 0.46 +0.6 749,951 - SO0735 0.46 +0.3 749,951 - SO0735 0.46 +0.1 749,951 - SO0735 0.46 +1.1 749,951 - SO0735 0.46 +0.6 750,010 + SO0735 0.52 -1.2 750,091 + SO0735 0.61 -0.0 750,164 + SO0735 0.69 -1.6 750,164 + SO0735 0.69 +0.8 750,172 - SO0735 0.69 +2.0 750,200 + SO0735 0.72 -0.1 750,222 + SO0735 0.75 +0.9 750,222 + SO0735 0.75 +0.5 750,222 + SO0735 0.75 +0.3 750,222 + SO0735 0.75 +0.9 750,222 + SO0735 0.75 +0.2 750,224 - SO0735 0.75 -0.7 750,230 - SO0735 0.75 +0.9 750,230 - SO0735 0.75 +1.2 750,230 - SO0735 0.75 -0.6 750,258 + SO0735 0.78 -0.2 750,258 + SO0735 0.78 +0.8 750,377 + -0.1 750,377 + -0.9 750,377 + +1.2 750,385 - -2.0 750,387 + +0.9 750,457 + -2.0 750,463 - -1.0 750,565 + SO0736 0.11 +0.2 750,565 + SO0736 0.11 +0.7 750,565 + SO0736 0.11 +1.2 750,573 - SO0736 0.12 -1.8 750,615 + SO0736 0.17 -0.9 750,629 - SO0736 0.19 -3.4 750,747 + SO0736 0.34 -0.4 750,768 + SO0736 0.37 -0.8 750,838 + SO0736 0.45 +0.4 750,838 + SO0736 0.45 -1.0 750,846 - SO0736 0.46 -0.6 750,848 - SO0736 0.47 -2.6 750,997 + SO0736 0.65 +0.6 751,193 - +1.4 751,198 - +0.4 751,297 + +0.6 751,297 + -1.8 751,305 - -0.1 751,305 - -1.3 751,305 - -1.7 751,308 - +1.4 751,356 + +1.0 751,356 + +0.1 751,356 + -1.9 751,356 + +0.3 751,356 + +0.4 751,356 + +0.8 751,356 + -1.0 751,356 + +0.1 751,356 + -0.7 751,364 - -0.1 751,364 - -0.5 751,366 - +1.0 751,568 + +0.4 751,587 + -1.2 751,587 + -2.0 751,628 + +0.7 751,638 - -1.5 751,662 + +0.4 751,698 - +1.9 751,833 + SO0737 0.13 +0.1 751,833 + SO0737 0.13 -1.0 751,833 + SO0737 0.13 -0.7 751,841 - SO0737 0.13 +1.0 751,841 - SO0737 0.13 +0.8 751,858 - SO0737 0.14 -0.8 751,879 + SO0737 0.15 -0.6 751,879 + SO0737 0.15 -0.2 751,879 + SO0737 0.15 -1.1 751,885 + SO0737 0.15 -0.5 751,885 + SO0737 0.15 +0.0 751,939 + SO0737 0.18 -1.2 751,964 - SO0737 0.19 -0.9 751,964 - SO0737 0.19 +0.5 751,969 - SO0737 0.19 -1.3 752,075 - SO0737 0.24 +0.5 752,116 + SO0737 0.26 +0.9 752,124 - SO0737 0.27 -0.7 752,124 - SO0737 0.27 +0.0 752,124 - SO0737 0.27 +0.6 752,124 - SO0737 0.27 -0.5 752,124 - SO0737 0.27 +1.1 752,124 - SO0737 0.27 +0.4 752,124 - SO0737 0.27 -0.4 752,149 - SO0737 0.28 -1.3 752,169 + SO0737 0.29 -0.4 752,177 - SO0737 0.29 +1.0
Or see this region's nucleotide sequence