Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16110

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16100 and BWI76_RS16105 are separated by 23 nucleotidesBWI76_RS16105 and BWI76_RS16110 are separated by 409 nucleotidesBWI76_RS16110 and BWI76_RS16115 are separated by 52 nucleotides BWI76_RS16100: BWI76_RS16100 - flavocytochrome c, at 3,338,556 to 3,341,333 _RS16100 BWI76_RS16105: BWI76_RS16105 - hypothetical protein, at 3,341,357 to 3,341,551 _RS16105 BWI76_RS16110: BWI76_RS16110 - L-tartrate/succinate antiporter, at 3,341,961 to 3,343,466 _RS16110 BWI76_RS16115: BWI76_RS16115 - fumarate hydratase, at 3,343,519 to 3,345,174 _RS16115 Position (kb) 3341 3342 3343 3344Strain fitness (log2 ratio) -3 -2 -1 0 1at 3341.058 kb on - strandat 3341.121 kb on - strandat 3341.197 kb on + strandat 3341.199 kb on - strandat 3341.199 kb on - strandat 3341.205 kb on - strandat 3341.215 kb on - strandat 3341.222 kb on - strandat 3341.222 kb on - strandat 3341.222 kb on - strandat 3341.222 kb on - strandat 3341.258 kb on - strandat 3341.284 kb on + strandat 3341.287 kb on - strandat 3341.305 kb on - strandat 3341.305 kb on - strandat 3341.314 kb on - strandat 3341.977 kb on + strandat 3341.979 kb on + strandat 3341.979 kb on + strandat 3341.980 kb on + strandat 3341.980 kb on + strandat 3341.981 kb on + strandat 3341.987 kb on - strandat 3341.987 kb on - strandat 3341.988 kb on - strandat 3342.012 kb on + strandat 3342.051 kb on - strandat 3342.216 kb on + strand, within BWI76_RS16110at 3342.224 kb on + strand, within BWI76_RS16110at 3342.229 kb on + strand, within BWI76_RS16110at 3342.473 kb on + strand, within BWI76_RS16110at 3342.538 kb on + strand, within BWI76_RS16110at 3342.582 kb on - strand, within BWI76_RS16110at 3342.592 kb on - strand, within BWI76_RS16110at 3342.643 kb on + strand, within BWI76_RS16110at 3343.663 kb on - strandat 3343.663 kb on - strandat 3343.929 kb on + strand, within BWI76_RS16115at 3344.316 kb on - strand, within BWI76_RS16115at 3344.316 kb on - strand, within BWI76_RS16115

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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3,341,058 - +0.0
3,341,121 - +0.1
3,341,197 + +0.0
3,341,199 - +0.1
3,341,199 - -3.5
3,341,205 - +0.0
3,341,215 - -0.5
3,341,222 - -0.2
3,341,222 - +0.5
3,341,222 - -0.5
3,341,222 - +0.1
3,341,258 - -0.1
3,341,284 + +0.2
3,341,287 - +0.3
3,341,305 - -0.0
3,341,305 - +0.4
3,341,314 - +1.2
3,341,977 + +1.0
3,341,979 + -1.4
3,341,979 + +0.1
3,341,980 + -0.8
3,341,980 + -0.4
3,341,981 + +1.0
3,341,987 - +0.2
3,341,987 - +0.4
3,341,988 - +0.4
3,342,012 + -1.8
3,342,051 - -1.6
3,342,216 + BWI76_RS16110 0.17 -0.3
3,342,224 + BWI76_RS16110 0.17 -1.0
3,342,229 + BWI76_RS16110 0.18 +0.9
3,342,473 + BWI76_RS16110 0.34 +0.7
3,342,538 + BWI76_RS16110 0.38 -0.3
3,342,582 - BWI76_RS16110 0.41 -0.0
3,342,592 - BWI76_RS16110 0.42 -0.2
3,342,643 + BWI76_RS16110 0.45 +0.6
3,343,663 - -2.4
3,343,663 - -2.2
3,343,929 + BWI76_RS16115 0.25 -0.5
3,344,316 - BWI76_RS16115 0.48 -0.4
3,344,316 - BWI76_RS16115 0.48 -1.5

Or see this region's nucleotide sequence