Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07815

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07810 and BWI76_RS07815 overlap by 4 nucleotidesBWI76_RS07815 and BWI76_RS07820 are separated by 127 nucleotides BWI76_RS07810: BWI76_RS07810 - sugar ABC transporter periplasmic sugar-binding protein, at 1,655,514 to 1,656,578 _RS07810 BWI76_RS07815: BWI76_RS07815 - hypothetical protein, at 1,656,575 to 1,657,816 _RS07815 BWI76_RS07820: BWI76_RS07820 - S-methyl-5-thioribose kinase, at 1,657,944 to 1,659,143 _RS07820 Position (kb) 1656 1657 1658Strain fitness (log2 ratio) -1 0 1at 1655.888 kb on - strand, within BWI76_RS07810at 1655.888 kb on - strand, within BWI76_RS07810at 1655.956 kb on - strand, within BWI76_RS07810at 1656.128 kb on + strand, within BWI76_RS07810at 1656.194 kb on + strand, within BWI76_RS07810at 1656.219 kb on - strand, within BWI76_RS07810at 1656.337 kb on + strand, within BWI76_RS07810at 1656.591 kb on + strandat 1656.599 kb on - strandat 1656.619 kb on + strandat 1656.644 kb on + strandat 1656.669 kb on - strandat 1656.920 kb on - strand, within BWI76_RS07815at 1657.029 kb on - strand, within BWI76_RS07815at 1657.270 kb on - strand, within BWI76_RS07815at 1657.318 kb on + strand, within BWI76_RS07815at 1657.363 kb on - strand, within BWI76_RS07815at 1657.724 kb on + strandat 1657.825 kb on + strandat 1658.006 kb on + strandat 1658.024 kb on + strandat 1658.800 kb on + strand, within BWI76_RS07820

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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1,655,888 - BWI76_RS07810 0.35 -0.6
1,655,888 - BWI76_RS07810 0.35 +0.1
1,655,956 - BWI76_RS07810 0.42 +1.0
1,656,128 + BWI76_RS07810 0.58 +0.6
1,656,194 + BWI76_RS07810 0.64 +0.4
1,656,219 - BWI76_RS07810 0.66 -1.1
1,656,337 + BWI76_RS07810 0.77 +0.1
1,656,591 + +1.5
1,656,599 - -1.1
1,656,619 + +1.5
1,656,644 + +0.0
1,656,669 - -0.7
1,656,920 - BWI76_RS07815 0.28 +0.2
1,657,029 - BWI76_RS07815 0.37 +1.5
1,657,270 - BWI76_RS07815 0.56 +0.7
1,657,318 + BWI76_RS07815 0.60 +0.6
1,657,363 - BWI76_RS07815 0.63 +0.8
1,657,724 + +1.1
1,657,825 + +0.2
1,658,006 + -0.3
1,658,024 + +0.2
1,658,800 + BWI76_RS07820 0.71 +1.6

Or see this region's nucleotide sequence