Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01855 and BWI76_RS01860 are separated by 12 nucleotides BWI76_RS01860 and BWI76_RS01865 are separated by 98 nucleotides BWI76_RS01865 and BWI76_RS01870 are separated by 129 nucleotides BWI76_RS01870 and BWI76_RS01875 are separated by 122 nucleotides
BWI76_RS01855: BWI76_RS01855 - chorismate lyase, at 378,583 to 379,080
_RS01855
BWI76_RS01860: BWI76_RS01860 - 4-hydroxybenzoate octaprenyltransferase, at 379,093 to 379,962
_RS01860
BWI76_RS01865: BWI76_RS01865 - glycerol-3-phosphate 1-O-acyltransferase, at 380,061 to 382,484
_RS01865
BWI76_RS01870: BWI76_RS01870 - diacylglycerol kinase, at 382,614 to 382,982
_RS01870
BWI76_RS01875: BWI76_RS01875 - repressor LexA, at 383,105 to 383,713
_RS01875
Position (kb) 380
381
382
383 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 379.069 kb on + strand at 380.039 kb on + strand at 382.488 kb on - strand at 382.536 kb on - strand at 382.571 kb on + strand at 382.571 kb on + strand at 382.571 kb on + strand at 382.627 kb on + strand at 382.764 kb on - strand, within BWI76_RS01870 at 382.798 kb on - strand, within BWI76_RS01870 at 382.803 kb on - strand, within BWI76_RS01870 at 382.873 kb on + strand, within BWI76_RS01870 at 382.907 kb on - strand, within BWI76_RS01870 at 382.995 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 379,069 + +0.8 380,039 + +0.0 382,488 - -3.0 382,536 - -2.2 382,571 + -0.6 382,571 + +0.3 382,571 + -0.7 382,627 + -1.7 382,764 - BWI76_RS01870 0.41 -0.3 382,798 - BWI76_RS01870 0.50 -0.8 382,803 - BWI76_RS01870 0.51 +0.8 382,873 + BWI76_RS01870 0.70 +1.3 382,907 - BWI76_RS01870 0.79 +2.2 382,995 - +0.6
Or see this region's nucleotide sequence