Experiment: KB with Xanthyletin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_5001 and Psyr_5002 overlap by 8 nucleotides Psyr_5002 and Psyr_5003 are separated by 244 nucleotides
Psyr_5001: Psyr_5001 - conserved hypothetical protein, at 5,930,376 to 5,932,823
_5001
Psyr_5002: Psyr_5002 - conserved hypothetical protein, at 5,932,816 to 5,933,298
_5002
Psyr_5003: Psyr_5003 - MscS Mechanosensitive ion channel, at 5,933,543 to 5,934,343
_5003
Position (kb) 5932
5933
5934 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5931.877 kb on - strand, within Psyr_5001 at 5931.974 kb on + strand, within Psyr_5001 at 5932.342 kb on + strand, within Psyr_5001 at 5932.801 kb on + strand at 5932.801 kb on + strand at 5932.801 kb on + strand at 5932.801 kb on + strand at 5932.801 kb on + strand at 5932.801 kb on + strand at 5932.802 kb on - strand at 5932.802 kb on - strand at 5932.802 kb on - strand at 5932.802 kb on - strand at 5932.802 kb on - strand at 5932.802 kb on - strand at 5932.802 kb on - strand at 5933.060 kb on + strand, within Psyr_5002 at 5933.060 kb on + strand, within Psyr_5002 at 5933.060 kb on + strand, within Psyr_5002 at 5933.060 kb on + strand, within Psyr_5002 at 5933.061 kb on - strand, within Psyr_5002 at 5933.061 kb on - strand, within Psyr_5002 at 5933.061 kb on - strand, within Psyr_5002 at 5933.061 kb on - strand, within Psyr_5002 at 5933.061 kb on - strand, within Psyr_5002 at 5933.069 kb on + strand, within Psyr_5002 at 5933.069 kb on + strand, within Psyr_5002 at 5933.069 kb on + strand, within Psyr_5002 at 5933.069 kb on + strand, within Psyr_5002 at 5933.069 kb on + strand, within Psyr_5002 at 5933.070 kb on - strand, within Psyr_5002 at 5933.070 kb on - strand, within Psyr_5002 at 5933.070 kb on - strand, within Psyr_5002 at 5933.070 kb on - strand, within Psyr_5002 at 5933.070 kb on - strand, within Psyr_5002 at 5933.070 kb on - strand, within Psyr_5002 at 5933.174 kb on + strand, within Psyr_5002 at 5933.174 kb on + strand, within Psyr_5002 at 5933.249 kb on + strand, within Psyr_5002 at 5933.249 kb on + strand, within Psyr_5002 at 5933.250 kb on - strand at 5933.250 kb on - strand at 5933.298 kb on + strand at 5933.356 kb on + strand at 5933.356 kb on + strand at 5933.356 kb on + strand at 5933.356 kb on + strand at 5933.357 kb on - strand at 5933.424 kb on - strand at 5933.451 kb on - strand at 5933.451 kb on - strand at 5933.451 kb on - strand at 5933.451 kb on - strand at 5933.485 kb on + strand at 5933.485 kb on + strand at 5933.485 kb on + strand at 5933.485 kb on + strand at 5933.486 kb on - strand at 5933.523 kb on - strand at 5933.523 kb on - strand at 5933.748 kb on - strand, within Psyr_5003 at 5933.748 kb on - strand, within Psyr_5003 at 5933.748 kb on - strand, within Psyr_5003 at 5933.748 kb on - strand, within Psyr_5003 at 5933.748 kb on - strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.779 kb on + strand, within Psyr_5003 at 5933.780 kb on - strand, within Psyr_5003 at 5933.780 kb on - strand, within Psyr_5003 at 5933.780 kb on - strand, within Psyr_5003 at 5933.780 kb on - strand, within Psyr_5003 at 5933.780 kb on - strand, within Psyr_5003 at 5933.807 kb on + strand, within Psyr_5003 at 5933.807 kb on + strand, within Psyr_5003 at 5933.807 kb on + strand, within Psyr_5003 at 5933.807 kb on + strand, within Psyr_5003 at 5933.808 kb on - strand, within Psyr_5003 at 5933.808 kb on - strand, within Psyr_5003 at 5933.808 kb on - strand, within Psyr_5003 at 5933.808 kb on - strand, within Psyr_5003 at 5933.948 kb on - strand, within Psyr_5003 at 5934.189 kb on + strand, within Psyr_5003 at 5934.189 kb on + strand, within Psyr_5003 at 5934.189 kb on + strand, within Psyr_5003 at 5934.189 kb on + strand, within Psyr_5003 at 5934.189 kb on + strand, within Psyr_5003 at 5934.189 kb on + strand, within Psyr_5003 at 5934.190 kb on - strand, within Psyr_5003 at 5934.190 kb on - strand, within Psyr_5003 at 5934.190 kb on - strand, within Psyr_5003 at 5934.190 kb on - strand, within Psyr_5003 at 5934.190 kb on - strand, within Psyr_5003 at 5934.190 kb on - strand, within Psyr_5003 at 5934.190 kb on - strand, within Psyr_5003 at 5934.264 kb on - strand at 5934.281 kb on + strand at 5934.281 kb on + strand at 5934.282 kb on - strand at 5934.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Xanthyletin 10 mM remove 5,931,877 - Psyr_5001 0.61 +0.0 5,931,974 + Psyr_5001 0.65 -2.3 5,932,342 + Psyr_5001 0.80 +0.4 5,932,801 + -0.1 5,932,801 + +1.0 5,932,801 + +0.0 5,932,801 + -0.6 5,932,801 + +1.0 5,932,801 + -0.2 5,932,802 - -0.8 5,932,802 - +0.6 5,932,802 - -0.6 5,932,802 - -0.6 5,932,802 - +0.3 5,932,802 - +1.5 5,932,802 - +0.4 5,933,060 + Psyr_5002 0.51 -0.5 5,933,060 + Psyr_5002 0.51 -0.3 5,933,060 + Psyr_5002 0.51 +0.5 5,933,060 + Psyr_5002 0.51 +0.4 5,933,061 - Psyr_5002 0.51 +0.5 5,933,061 - Psyr_5002 0.51 +1.1 5,933,061 - Psyr_5002 0.51 -0.3 5,933,061 - Psyr_5002 0.51 +0.3 5,933,061 - Psyr_5002 0.51 +1.8 5,933,069 + Psyr_5002 0.52 +0.5 5,933,069 + Psyr_5002 0.52 +0.2 5,933,069 + Psyr_5002 0.52 -0.6 5,933,069 + Psyr_5002 0.52 -0.7 5,933,069 + Psyr_5002 0.52 +0.2 5,933,070 - Psyr_5002 0.53 -0.7 5,933,070 - Psyr_5002 0.53 -0.6 5,933,070 - Psyr_5002 0.53 -0.3 5,933,070 - Psyr_5002 0.53 -0.8 5,933,070 - Psyr_5002 0.53 -1.7 5,933,070 - Psyr_5002 0.53 +1.9 5,933,174 + Psyr_5002 0.74 -0.1 5,933,174 + Psyr_5002 0.74 -2.0 5,933,249 + Psyr_5002 0.90 -0.7 5,933,249 + Psyr_5002 0.90 +0.9 5,933,250 - +0.8 5,933,250 - +1.5 5,933,298 + +1.8 5,933,356 + +1.4 5,933,356 + +0.5 5,933,356 + -0.2 5,933,356 + -1.4 5,933,357 - +0.1 5,933,424 - -1.0 5,933,451 - -0.6 5,933,451 - -1.4 5,933,451 - -0.4 5,933,451 - +0.1 5,933,485 + -0.1 5,933,485 + -1.3 5,933,485 + +1.3 5,933,485 + +0.4 5,933,486 - -0.3 5,933,523 - -0.2 5,933,523 - -0.7 5,933,748 - Psyr_5003 0.26 +0.8 5,933,748 - Psyr_5003 0.26 -0.3 5,933,748 - Psyr_5003 0.26 +0.6 5,933,748 - Psyr_5003 0.26 -0.1 5,933,748 - Psyr_5003 0.26 -1.2 5,933,779 + Psyr_5003 0.29 +0.8 5,933,779 + Psyr_5003 0.29 -0.8 5,933,779 + Psyr_5003 0.29 +0.5 5,933,779 + Psyr_5003 0.29 +0.6 5,933,779 + Psyr_5003 0.29 +1.1 5,933,779 + Psyr_5003 0.29 +0.3 5,933,779 + Psyr_5003 0.29 +0.3 5,933,779 + Psyr_5003 0.29 +0.3 5,933,780 - Psyr_5003 0.30 -1.5 5,933,780 - Psyr_5003 0.30 -0.3 5,933,780 - Psyr_5003 0.30 -0.1 5,933,780 - Psyr_5003 0.30 -1.0 5,933,780 - Psyr_5003 0.30 +0.1 5,933,807 + Psyr_5003 0.33 +0.6 5,933,807 + Psyr_5003 0.33 -1.6 5,933,807 + Psyr_5003 0.33 -0.2 5,933,807 + Psyr_5003 0.33 +0.9 5,933,808 - Psyr_5003 0.33 +0.7 5,933,808 - Psyr_5003 0.33 +0.3 5,933,808 - Psyr_5003 0.33 -0.2 5,933,808 - Psyr_5003 0.33 +0.8 5,933,948 - Psyr_5003 0.51 +1.8 5,934,189 + Psyr_5003 0.81 +0.7 5,934,189 + Psyr_5003 0.81 -0.5 5,934,189 + Psyr_5003 0.81 -0.7 5,934,189 + Psyr_5003 0.81 -1.0 5,934,189 + Psyr_5003 0.81 -0.5 5,934,189 + Psyr_5003 0.81 +0.2 5,934,190 - Psyr_5003 0.81 -0.3 5,934,190 - Psyr_5003 0.81 -0.1 5,934,190 - Psyr_5003 0.81 +0.2 5,934,190 - Psyr_5003 0.81 +0.6 5,934,190 - Psyr_5003 0.81 -0.7 5,934,190 - Psyr_5003 0.81 -0.9 5,934,190 - Psyr_5003 0.81 -0.4 5,934,264 - +0.8 5,934,281 + +0.4 5,934,281 + -0.4 5,934,282 - +1.1 5,934,282 - +0.3
Or see this region's nucleotide sequence