Experiment: KB with Xanthyletin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3938 and Psyr_3939 are separated by 260 nucleotides Psyr_3939 and Psyr_3940 are separated by 889 nucleotides
Psyr_3938: Psyr_3938 - Amidase, at 4,683,313 to 4,684,686
_3938
Psyr_3939: Psyr_3939 - transcriptional regulator, GntR family, at 4,684,947 to 4,686,026
_3939
Psyr_3940: Psyr_3940 - Protozoan/cyanobacterial globin, at 4,686,916 to 4,687,344
_3940
Position (kb) 4684
4685
4686
4687 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4683.953 kb on - strand, within Psyr_3938 at 4684.137 kb on + strand, within Psyr_3938 at 4684.137 kb on + strand, within Psyr_3938 at 4684.137 kb on + strand, within Psyr_3938 at 4684.138 kb on - strand, within Psyr_3938 at 4684.138 kb on - strand, within Psyr_3938 at 4684.138 kb on - strand, within Psyr_3938 at 4684.820 kb on + strand at 4684.820 kb on + strand at 4684.820 kb on + strand at 4684.821 kb on - strand at 4684.821 kb on - strand at 4684.893 kb on + strand at 4684.894 kb on - strand at 4684.894 kb on - strand at 4684.894 kb on - strand at 4684.898 kb on + strand at 4684.899 kb on - strand at 4684.935 kb on - strand at 4684.958 kb on + strand at 4684.958 kb on + strand at 4684.958 kb on + strand at 4685.024 kb on + strand at 4685.025 kb on - strand at 4685.360 kb on + strand, within Psyr_3939 at 4685.360 kb on + strand, within Psyr_3939 at 4685.360 kb on + strand, within Psyr_3939 at 4685.360 kb on + strand, within Psyr_3939 at 4685.360 kb on + strand, within Psyr_3939 at 4685.360 kb on + strand, within Psyr_3939 at 4685.360 kb on + strand, within Psyr_3939 at 4685.361 kb on - strand, within Psyr_3939 at 4685.361 kb on - strand, within Psyr_3939 at 4685.361 kb on - strand, within Psyr_3939 at 4685.361 kb on - strand, within Psyr_3939 at 4685.361 kb on - strand, within Psyr_3939 at 4685.396 kb on + strand, within Psyr_3939 at 4685.571 kb on + strand, within Psyr_3939 at 4685.870 kb on - strand, within Psyr_3939 at 4686.056 kb on + strand at 4686.056 kb on + strand at 4686.056 kb on + strand at 4686.056 kb on + strand at 4686.056 kb on + strand at 4686.056 kb on + strand at 4686.057 kb on - strand at 4686.057 kb on - strand at 4686.057 kb on - strand at 4686.057 kb on - strand at 4686.057 kb on - strand at 4686.058 kb on + strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.059 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.061 kb on - strand at 4686.186 kb on + strand at 4686.186 kb on + strand at 4686.186 kb on + strand at 4686.232 kb on - strand at 4686.577 kb on + strand at 4686.651 kb on - strand at 4686.878 kb on + strand at 4686.891 kb on + strand at 4686.917 kb on + strand at 4686.917 kb on + strand at 4686.917 kb on + strand at 4686.917 kb on + strand at 4686.917 kb on + strand at 4686.918 kb on - strand at 4686.918 kb on - strand at 4686.918 kb on - strand at 4686.918 kb on - strand at 4686.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Xanthyletin 10 mM remove 4,683,953 - Psyr_3938 0.47 +0.6 4,684,137 + Psyr_3938 0.60 +1.2 4,684,137 + Psyr_3938 0.60 +0.5 4,684,137 + Psyr_3938 0.60 +1.4 4,684,138 - Psyr_3938 0.60 +0.6 4,684,138 - Psyr_3938 0.60 -2.0 4,684,138 - Psyr_3938 0.60 -0.7 4,684,820 + +1.2 4,684,820 + -0.3 4,684,820 + +0.5 4,684,821 - -0.0 4,684,821 - -0.3 4,684,893 + -0.5 4,684,894 - -0.4 4,684,894 - -0.5 4,684,894 - -0.4 4,684,898 + +2.6 4,684,899 - +0.1 4,684,935 - +0.2 4,684,958 + +0.4 4,684,958 + -0.2 4,684,958 + +0.2 4,685,024 + -0.0 4,685,025 - -0.7 4,685,360 + Psyr_3939 0.38 +0.2 4,685,360 + Psyr_3939 0.38 -0.5 4,685,360 + Psyr_3939 0.38 -0.1 4,685,360 + Psyr_3939 0.38 +0.4 4,685,360 + Psyr_3939 0.38 -1.0 4,685,360 + Psyr_3939 0.38 +0.1 4,685,360 + Psyr_3939 0.38 -0.9 4,685,361 - Psyr_3939 0.38 +0.5 4,685,361 - Psyr_3939 0.38 -0.2 4,685,361 - Psyr_3939 0.38 +0.6 4,685,361 - Psyr_3939 0.38 -0.8 4,685,361 - Psyr_3939 0.38 -1.0 4,685,396 + Psyr_3939 0.42 +0.1 4,685,571 + Psyr_3939 0.58 +0.9 4,685,870 - Psyr_3939 0.85 -0.4 4,686,056 + +0.5 4,686,056 + +1.6 4,686,056 + -0.6 4,686,056 + -0.4 4,686,056 + -0.4 4,686,056 + -0.6 4,686,057 - -0.0 4,686,057 - +0.9 4,686,057 - -1.0 4,686,057 - +1.9 4,686,057 - -1.1 4,686,058 + +0.2 4,686,059 - -1.0 4,686,059 - -0.0 4,686,059 - +0.6 4,686,059 - +1.6 4,686,059 - +0.6 4,686,059 - +0.4 4,686,059 - +2.0 4,686,059 - -1.4 4,686,059 - -0.5 4,686,061 - +0.5 4,686,061 - +1.0 4,686,061 - +0.7 4,686,061 - +0.1 4,686,061 - +1.0 4,686,061 - -0.4 4,686,061 - -0.4 4,686,061 - +0.6 4,686,061 - -0.8 4,686,061 - -1.0 4,686,061 - +1.0 4,686,186 + +0.6 4,686,186 + -0.8 4,686,186 + -0.6 4,686,232 - +1.4 4,686,577 + +0.6 4,686,651 - -0.8 4,686,878 + +0.2 4,686,891 + +1.0 4,686,917 + -0.1 4,686,917 + -0.8 4,686,917 + +0.1 4,686,917 + +0.2 4,686,917 + -0.7 4,686,918 - +0.4 4,686,918 - +1.6 4,686,918 - +0.1 4,686,918 - +0.6 4,686,918 - -0.4
Or see this region's nucleotide sequence