Experiment: KB with Xanthyletin 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3527 and Psyr_3528 are separated by 75 nucleotides Psyr_3528 and Psyr_3529 are separated by 263 nucleotides Psyr_3529 and Psyr_3530 are separated by 10 nucleotides
Psyr_3527: Psyr_3527 - glutathione-independent formaldehyde dehydrogenase, at 4,203,866 to 4,205,101
_3527
Psyr_3528: Psyr_3528 - hypothetical protein, at 4,205,177 to 4,205,419
_3528
Psyr_3529: Psyr_3529 - Asp/Glu racemase, at 4,205,683 to 4,206,414
_3529
Psyr_3530: Psyr_3530 - transcriptional regulator, GntR family, at 4,206,425 to 4,207,144
_3530
Position (kb) 4205
4206
4207 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4204.758 kb on + strand, within Psyr_3527 at 4204.758 kb on + strand, within Psyr_3527 at 4204.759 kb on - strand, within Psyr_3527 at 4204.791 kb on + strand, within Psyr_3527 at 4204.794 kb on - strand, within Psyr_3527 at 4204.794 kb on - strand, within Psyr_3527 at 4204.794 kb on - strand, within Psyr_3527 at 4204.794 kb on - strand, within Psyr_3527 at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.099 kb on + strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.100 kb on - strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.176 kb on + strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.177 kb on - strand at 4205.266 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.352 kb on - strand, within Psyr_3528 at 4205.438 kb on + strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.439 kb on - strand at 4205.440 kb on + strand at 4205.440 kb on + strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.441 kb on - strand at 4205.485 kb on + strand at 4205.485 kb on + strand at 4205.486 kb on - strand at 4205.486 kb on - strand at 4205.616 kb on + strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.617 kb on - strand at 4205.697 kb on - strand at 4205.989 kb on - strand, within Psyr_3529 at 4206.007 kb on + strand, within Psyr_3529 at 4206.007 kb on + strand, within Psyr_3529 at 4206.008 kb on - strand, within Psyr_3529 at 4206.008 kb on - strand, within Psyr_3529 at 4206.008 kb on - strand, within Psyr_3529 at 4206.008 kb on - strand, within Psyr_3529 at 4206.445 kb on + strand at 4206.616 kb on - strand, within Psyr_3530 at 4206.866 kb on + strand, within Psyr_3530 at 4206.866 kb on + strand, within Psyr_3530 at 4206.866 kb on + strand, within Psyr_3530 at 4206.866 kb on + strand, within Psyr_3530 at 4206.867 kb on - strand, within Psyr_3530 at 4206.867 kb on - strand, within Psyr_3530 at 4206.993 kb on - strand, within Psyr_3530 at 4207.071 kb on + strand, within Psyr_3530 at 4207.072 kb on - strand, within Psyr_3530 at 4207.176 kb on - strand at 4207.237 kb on + strand at 4207.237 kb on + strand at 4207.237 kb on + strand at 4207.237 kb on + strand at 4207.238 kb on - strand at 4207.271 kb on + strand at 4207.271 kb on + strand at 4207.272 kb on - strand at 4207.272 kb on - strand at 4207.272 kb on - strand at 4207.272 kb on - strand at 4207.272 kb on - strand at 4207.272 kb on - strand at 4207.294 kb on + strand at 4207.294 kb on + strand at 4207.400 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Xanthyletin 10 mM remove 4,204,758 + Psyr_3527 0.72 -0.3 4,204,758 + Psyr_3527 0.72 -0.1 4,204,759 - Psyr_3527 0.72 +0.2 4,204,791 + Psyr_3527 0.75 +2.9 4,204,794 - Psyr_3527 0.75 -0.4 4,204,794 - Psyr_3527 0.75 +0.5 4,204,794 - Psyr_3527 0.75 -0.5 4,204,794 - Psyr_3527 0.75 -0.3 4,205,099 + +1.4 4,205,099 + +0.3 4,205,099 + +0.8 4,205,099 + -1.8 4,205,099 + -0.7 4,205,099 + +0.1 4,205,099 + -0.0 4,205,099 + -1.7 4,205,099 + -1.2 4,205,099 + -2.2 4,205,099 + +0.3 4,205,099 + -0.1 4,205,099 + +0.1 4,205,100 - -1.0 4,205,100 - -0.5 4,205,100 - -0.5 4,205,100 - -0.5 4,205,100 - +0.9 4,205,100 - +0.7 4,205,100 - -0.3 4,205,100 - -1.5 4,205,100 - +0.0 4,205,100 - -0.2 4,205,100 - -0.1 4,205,100 - -0.3 4,205,100 - -2.2 4,205,100 - +0.1 4,205,100 - -0.3 4,205,100 - -0.7 4,205,100 - -0.9 4,205,100 - -0.1 4,205,100 - +0.3 4,205,176 + -0.1 4,205,176 + +0.3 4,205,176 + +0.1 4,205,176 + -0.5 4,205,176 + -0.7 4,205,176 + +0.9 4,205,176 + -0.7 4,205,176 + -2.1 4,205,176 + -0.1 4,205,176 + -0.7 4,205,176 + -0.2 4,205,176 + -0.7 4,205,176 + -1.1 4,205,177 - +0.7 4,205,177 - -0.1 4,205,177 - +0.8 4,205,177 - -0.4 4,205,177 - -0.5 4,205,177 - -0.4 4,205,177 - +0.2 4,205,177 - +0.9 4,205,177 - -0.4 4,205,177 - +0.2 4,205,177 - +0.3 4,205,177 - +0.6 4,205,177 - -0.8 4,205,177 - -0.6 4,205,177 - -0.4 4,205,177 - -0.7 4,205,177 - -1.1 4,205,177 - +0.4 4,205,177 - +0.4 4,205,177 - +1.3 4,205,177 - -0.2 4,205,266 - Psyr_3528 0.37 -0.2 4,205,352 - Psyr_3528 0.72 -0.6 4,205,352 - Psyr_3528 0.72 -0.8 4,205,352 - Psyr_3528 0.72 +0.4 4,205,352 - Psyr_3528 0.72 -0.4 4,205,352 - Psyr_3528 0.72 -1.2 4,205,352 - Psyr_3528 0.72 -0.6 4,205,352 - Psyr_3528 0.72 -1.4 4,205,352 - Psyr_3528 0.72 -0.7 4,205,352 - Psyr_3528 0.72 -1.7 4,205,352 - Psyr_3528 0.72 +0.9 4,205,352 - Psyr_3528 0.72 +0.7 4,205,352 - Psyr_3528 0.72 +0.5 4,205,352 - Psyr_3528 0.72 +0.4 4,205,352 - Psyr_3528 0.72 +1.0 4,205,352 - Psyr_3528 0.72 +0.1 4,205,352 - Psyr_3528 0.72 +0.2 4,205,438 + +0.1 4,205,439 - +1.1 4,205,439 - -0.1 4,205,439 - -1.3 4,205,439 - -0.3 4,205,439 - -0.1 4,205,439 - +0.5 4,205,439 - -0.4 4,205,439 - +1.1 4,205,439 - -1.8 4,205,440 + +1.2 4,205,440 + +0.7 4,205,441 - +0.0 4,205,441 - +1.8 4,205,441 - +0.1 4,205,441 - -0.2 4,205,441 - -0.7 4,205,441 - +0.0 4,205,441 - +1.6 4,205,441 - -0.8 4,205,441 - -0.7 4,205,441 - -0.9 4,205,441 - -1.1 4,205,441 - -0.8 4,205,441 - +0.1 4,205,441 - +0.0 4,205,441 - +0.4 4,205,441 - -0.4 4,205,441 - -0.2 4,205,441 - -0.4 4,205,441 - +1.3 4,205,441 - +0.8 4,205,441 - -0.7 4,205,441 - -0.3 4,205,441 - +0.4 4,205,441 - -0.6 4,205,441 - -1.8 4,205,441 - +0.3 4,205,441 - +0.2 4,205,441 - +0.5 4,205,441 - -0.3 4,205,441 - -0.3 4,205,441 - -1.7 4,205,441 - -0.4 4,205,441 - -1.1 4,205,441 - -0.8 4,205,485 + -1.2 4,205,485 + +0.1 4,205,486 - +0.2 4,205,486 - -0.8 4,205,616 + +0.5 4,205,617 - -1.1 4,205,617 - +0.6 4,205,617 - -1.1 4,205,617 - -1.2 4,205,617 - +0.4 4,205,617 - -0.6 4,205,617 - +0.5 4,205,617 - +1.9 4,205,617 - -0.1 4,205,617 - -1.1 4,205,617 - +0.3 4,205,617 - -0.4 4,205,617 - -0.4 4,205,617 - +0.4 4,205,617 - +1.3 4,205,617 - +0.3 4,205,617 - +0.5 4,205,617 - +0.3 4,205,617 - +0.3 4,205,617 - -1.5 4,205,617 - -0.1 4,205,617 - +0.5 4,205,617 - +1.4 4,205,617 - -0.1 4,205,617 - +0.7 4,205,617 - -0.3 4,205,697 - -0.1 4,205,989 - Psyr_3529 0.42 -0.8 4,206,007 + Psyr_3529 0.44 +0.9 4,206,007 + Psyr_3529 0.44 +0.1 4,206,008 - Psyr_3529 0.44 +0.4 4,206,008 - Psyr_3529 0.44 +0.6 4,206,008 - Psyr_3529 0.44 +0.1 4,206,008 - Psyr_3529 0.44 +0.8 4,206,445 + +1.9 4,206,616 - Psyr_3530 0.27 -0.2 4,206,866 + Psyr_3530 0.61 +0.1 4,206,866 + Psyr_3530 0.61 -0.1 4,206,866 + Psyr_3530 0.61 +0.0 4,206,866 + Psyr_3530 0.61 +0.0 4,206,867 - Psyr_3530 0.61 +0.3 4,206,867 - Psyr_3530 0.61 +1.3 4,206,993 - Psyr_3530 0.79 +0.3 4,207,071 + Psyr_3530 0.90 +0.9 4,207,072 - Psyr_3530 0.90 +0.1 4,207,176 - -0.5 4,207,237 + -0.9 4,207,237 + -1.4 4,207,237 + +0.3 4,207,237 + -1.4 4,207,238 - -0.5 4,207,271 + -1.2 4,207,271 + -0.7 4,207,272 - +0.9 4,207,272 - -1.1 4,207,272 - -0.3 4,207,272 - -0.8 4,207,272 - -0.2 4,207,272 - +0.4 4,207,294 + -0.3 4,207,294 + -1.4 4,207,400 + +1.2
Or see this region's nucleotide sequence