Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24310

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24305 and BWI76_RS24310 are separated by 94 nucleotidesBWI76_RS24310 and BWI76_RS24315 are separated by 120 nucleotides BWI76_RS24305: BWI76_RS24305 - 2,5-didehydrogluconate reductase A, at 5,063,725 to 5,064,552 _RS24305 BWI76_RS24310: BWI76_RS24310 - YgiQ family radical SAM protein, at 5,064,647 to 5,066,830 _RS24310 BWI76_RS24315: BWI76_RS24315 - cell division protein FtsP, at 5,066,951 to 5,068,363 _RS24315 Position (kb) 5064 5065 5066 5067Strain fitness (log2 ratio) -2 -1 0 1 2at 5063.666 kb on + strandat 5063.674 kb on - strandat 5063.710 kb on - strandat 5063.763 kb on + strandat 5063.783 kb on - strandat 5063.910 kb on - strand, within BWI76_RS24305at 5063.912 kb on + strand, within BWI76_RS24305at 5063.920 kb on - strand, within BWI76_RS24305at 5063.976 kb on + strand, within BWI76_RS24305at 5063.976 kb on + strand, within BWI76_RS24305at 5064.083 kb on + strand, within BWI76_RS24305at 5064.307 kb on + strand, within BWI76_RS24305at 5064.385 kb on + strand, within BWI76_RS24305at 5064.385 kb on + strand, within BWI76_RS24305at 5064.385 kb on + strand, within BWI76_RS24305at 5064.510 kb on + strandat 5064.906 kb on + strand, within BWI76_RS24310at 5064.959 kb on + strand, within BWI76_RS24310at 5064.969 kb on + strand, within BWI76_RS24310at 5064.977 kb on - strand, within BWI76_RS24310at 5064.993 kb on + strand, within BWI76_RS24310at 5065.165 kb on + strand, within BWI76_RS24310at 5065.345 kb on + strand, within BWI76_RS24310at 5065.483 kb on - strand, within BWI76_RS24310at 5065.517 kb on - strand, within BWI76_RS24310at 5065.816 kb on + strand, within BWI76_RS24310at 5065.925 kb on + strand, within BWI76_RS24310at 5065.954 kb on + strand, within BWI76_RS24310at 5066.077 kb on + strand, within BWI76_RS24310at 5066.173 kb on - strand, within BWI76_RS24310at 5066.400 kb on - strand, within BWI76_RS24310at 5066.405 kb on - strand, within BWI76_RS24310at 5066.479 kb on - strand, within BWI76_RS24310at 5066.546 kb on + strand, within BWI76_RS24310at 5066.561 kb on - strand, within BWI76_RS24310at 5066.924 kb on + strandat 5066.939 kb on + strandat 5066.939 kb on + strandat 5066.985 kb on - strandat 5067.060 kb on - strandat 5067.255 kb on + strand, within BWI76_RS24315at 5067.263 kb on - strandat 5067.554 kb on - strand, within BWI76_RS24315at 5067.656 kb on - strand, within BWI76_RS24315at 5067.767 kb on + strand, within BWI76_RS24315at 5067.775 kb on - strand, within BWI76_RS24315

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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5,063,666 + -0.1
5,063,674 - +0.5
5,063,710 - +0.5
5,063,763 + +0.1
5,063,783 - +0.6
5,063,910 - BWI76_RS24305 0.22 +0.2
5,063,912 + BWI76_RS24305 0.23 +0.1
5,063,920 - BWI76_RS24305 0.24 -0.3
5,063,976 + BWI76_RS24305 0.30 -0.1
5,063,976 + BWI76_RS24305 0.30 +0.6
5,064,083 + BWI76_RS24305 0.43 -0.7
5,064,307 + BWI76_RS24305 0.70 -0.5
5,064,385 + BWI76_RS24305 0.80 -0.5
5,064,385 + BWI76_RS24305 0.80 +1.1
5,064,385 + BWI76_RS24305 0.80 -0.4
5,064,510 + -1.4
5,064,906 + BWI76_RS24310 0.12 +0.5
5,064,959 + BWI76_RS24310 0.14 +1.0
5,064,969 + BWI76_RS24310 0.15 +1.7
5,064,977 - BWI76_RS24310 0.15 +0.1
5,064,993 + BWI76_RS24310 0.16 +0.6
5,065,165 + BWI76_RS24310 0.24 +0.7
5,065,345 + BWI76_RS24310 0.32 -0.2
5,065,483 - BWI76_RS24310 0.38 -1.8
5,065,517 - BWI76_RS24310 0.40 -1.2
5,065,816 + BWI76_RS24310 0.54 +0.8
5,065,925 + BWI76_RS24310 0.59 +0.7
5,065,954 + BWI76_RS24310 0.60 -0.3
5,066,077 + BWI76_RS24310 0.65 -0.8
5,066,173 - BWI76_RS24310 0.70 -0.0
5,066,400 - BWI76_RS24310 0.80 +1.0
5,066,405 - BWI76_RS24310 0.80 +1.8
5,066,479 - BWI76_RS24310 0.84 +0.2
5,066,546 + BWI76_RS24310 0.87 +0.1
5,066,561 - BWI76_RS24310 0.88 -0.6
5,066,924 + +1.7
5,066,939 + +0.2
5,066,939 + +0.3
5,066,985 - +0.3
5,067,060 - +0.6
5,067,255 + BWI76_RS24315 0.22 -0.1
5,067,263 - +1.1
5,067,554 - BWI76_RS24315 0.43 -1.1
5,067,656 - BWI76_RS24315 0.50 +2.7
5,067,767 + BWI76_RS24315 0.58 +0.5
5,067,775 - BWI76_RS24315 0.58 +0.5

Or see this region's nucleotide sequence