Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21295

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21290 and BWI76_RS21295 are separated by 166 nucleotidesBWI76_RS21295 and BWI76_RS21300 are separated by 36 nucleotidesBWI76_RS21300 and BWI76_RS21305 overlap by 1 nucleotides BWI76_RS21290: BWI76_RS21290 - DNA-binding transcriptional regulator, at 4,460,014 to 4,460,862 _RS21290 BWI76_RS21295: BWI76_RS21295 - ferredoxin, at 4,461,029 to 4,461,289 _RS21295 BWI76_RS21300: BWI76_RS21300 - holo-ACP synthase, at 4,461,326 to 4,461,706 _RS21300 BWI76_RS21305: BWI76_RS21305 - pyridoxine 5'-phosphate synthase, at 4,461,706 to 4,462,437 _RS21305 Position (kb) 4461 4462Strain fitness (log2 ratio) -1 0 1at 4460.045 kb on + strandat 4460.053 kb on - strandat 4460.053 kb on - strandat 4460.256 kb on + strand, within BWI76_RS21290at 4460.256 kb on + strand, within BWI76_RS21290at 4460.333 kb on - strand, within BWI76_RS21290at 4460.531 kb on + strand, within BWI76_RS21290at 4460.579 kb on - strand, within BWI76_RS21290at 4460.748 kb on - strandat 4460.907 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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4,460,045 + +1.4
4,460,053 - -0.4
4,460,053 - -0.3
4,460,256 + BWI76_RS21290 0.29 -0.0
4,460,256 + BWI76_RS21290 0.29 +0.6
4,460,333 - BWI76_RS21290 0.38 +1.0
4,460,531 + BWI76_RS21290 0.61 -0.1
4,460,579 - BWI76_RS21290 0.67 +0.4
4,460,748 - +0.4
4,460,907 - +0.4

Or see this region's nucleotide sequence