Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16510 and BWI76_RS16515 are separated by 18 nucleotides BWI76_RS16515 and BWI76_RS16520 are separated by 111 nucleotides
BWI76_RS16510: BWI76_RS16510 - transcriptional repressor PurR, at 3,422,502 to 3,423,527
_RS16510
BWI76_RS16515: BWI76_RS16515 - LysR family transcriptional regulator, at 3,423,546 to 3,424,457
_RS16515
BWI76_RS16520: BWI76_RS16520 - Bcr/CflA family multidrug efflux MFS transporter, at 3,424,569 to 3,425,753
_RS16520
Position (kb)
3423
3424
3425 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3422.765 kb on + strand, within BWI76_RS16510 at 3422.766 kb on + strand, within BWI76_RS16510 at 3422.766 kb on + strand, within BWI76_RS16510 at 3423.615 kb on - strand at 3423.615 kb on - strand at 3423.853 kb on + strand, within BWI76_RS16515 at 3424.076 kb on + strand, within BWI76_RS16515 at 3424.390 kb on - strand at 3424.511 kb on + strand at 3424.518 kb on - strand at 3424.519 kb on - strand at 3424.519 kb on - strand at 3424.523 kb on + strand at 3424.530 kb on - strand at 3424.934 kb on + strand, within BWI76_RS16520 at 3425.036 kb on - strand, within BWI76_RS16520 at 3425.116 kb on - strand, within BWI76_RS16520 at 3425.209 kb on - strand, within BWI76_RS16520 at 3425.305 kb on - strand, within BWI76_RS16520 at 3425.341 kb on - strand, within BWI76_RS16520 at 3425.439 kb on + strand, within BWI76_RS16520
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 3,422,765 + BWI76_RS16510 0.26 +0.2 3,422,766 + BWI76_RS16510 0.26 -1.4 3,422,766 + BWI76_RS16510 0.26 +1.0 3,423,615 - -1.6 3,423,615 - -2.2 3,423,853 + BWI76_RS16515 0.34 -0.4 3,424,076 + BWI76_RS16515 0.58 -3.5 3,424,390 - -2.8 3,424,511 + -1.6 3,424,518 - -4.3 3,424,519 - -1.6 3,424,519 - -3.1 3,424,523 + -0.9 3,424,530 - -3.8 3,424,934 + BWI76_RS16520 0.31 -3.0 3,425,036 - BWI76_RS16520 0.39 -1.0 3,425,116 - BWI76_RS16520 0.46 -0.4 3,425,209 - BWI76_RS16520 0.54 -1.8 3,425,305 - BWI76_RS16520 0.62 -2.9 3,425,341 - BWI76_RS16520 0.65 +0.9 3,425,439 + BWI76_RS16520 0.73 -3.5
Or see this region's nucleotide sequence