Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05935 and BWI76_RS05940 overlap by 32 nucleotides BWI76_RS05940 and BWI76_RS05945 are separated by 27 nucleotides BWI76_RS05945 and BWI76_RS05950 overlap by 11 nucleotides BWI76_RS05950 and BWI76_RS05955 overlap by 4 nucleotides
BWI76_RS05935: BWI76_RS05935 - hypothetical protein, at 1,248,024 to 1,249,667
_RS05935
BWI76_RS05940: BWI76_RS05940 - hypothetical protein, at 1,249,636 to 1,250,340
_RS05940
BWI76_RS05945: BWI76_RS05945 - amino acid ABC transporter permease, at 1,250,368 to 1,251,051
_RS05945
BWI76_RS05950: BWI76_RS05950 - polar amino acid ABC transporter inner membrane subunit, at 1,251,041 to 1,251,793
_RS05950
BWI76_RS05955: BWI76_RS05955 - ABC transporter, at 1,251,790 to 1,252,608
_RS05955
Position (kb)
1250
1251
1252 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1249.372 kb on + strand, within BWI76_RS05935 at 1249.415 kb on + strand, within BWI76_RS05935 at 1249.415 kb on + strand, within BWI76_RS05935 at 1249.449 kb on + strand, within BWI76_RS05935 at 1249.476 kb on + strand, within BWI76_RS05935 at 1249.481 kb on + strand, within BWI76_RS05935 at 1249.481 kb on + strand, within BWI76_RS05935 at 1249.621 kb on - strand at 1249.717 kb on + strand, within BWI76_RS05940 at 1249.913 kb on + strand, within BWI76_RS05940 at 1249.921 kb on - strand, within BWI76_RS05940 at 1249.929 kb on - strand, within BWI76_RS05940 at 1250.122 kb on + strand, within BWI76_RS05940 at 1250.176 kb on - strand, within BWI76_RS05940 at 1250.291 kb on - strand at 1250.293 kb on - strand at 1250.317 kb on + strand at 1250.427 kb on - strand at 1250.465 kb on + strand, within BWI76_RS05945 at 1250.465 kb on + strand, within BWI76_RS05945 at 1250.473 kb on - strand, within BWI76_RS05945 at 1250.554 kb on - strand, within BWI76_RS05945 at 1250.596 kb on - strand, within BWI76_RS05945 at 1250.729 kb on + strand, within BWI76_RS05945 at 1250.929 kb on - strand, within BWI76_RS05945 at 1251.378 kb on - strand, within BWI76_RS05950
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 1,249,372 + BWI76_RS05935 0.82 +0.2 1,249,415 + BWI76_RS05935 0.85 -0.3 1,249,415 + BWI76_RS05935 0.85 -0.7 1,249,449 + BWI76_RS05935 0.87 -1.4 1,249,476 + BWI76_RS05935 0.88 +1.6 1,249,481 + BWI76_RS05935 0.89 -0.7 1,249,481 + BWI76_RS05935 0.89 -0.5 1,249,621 - -0.6 1,249,717 + BWI76_RS05940 0.11 +0.5 1,249,913 + BWI76_RS05940 0.39 +1.4 1,249,921 - BWI76_RS05940 0.40 +0.3 1,249,929 - BWI76_RS05940 0.42 -1.7 1,250,122 + BWI76_RS05940 0.69 +1.3 1,250,176 - BWI76_RS05940 0.77 -0.5 1,250,291 - +1.6 1,250,293 - +0.7 1,250,317 + +0.9 1,250,427 - -1.1 1,250,465 + BWI76_RS05945 0.14 -3.2 1,250,465 + BWI76_RS05945 0.14 +0.2 1,250,473 - BWI76_RS05945 0.15 -1.3 1,250,554 - BWI76_RS05945 0.27 -1.6 1,250,596 - BWI76_RS05945 0.33 -1.5 1,250,729 + BWI76_RS05945 0.53 -0.7 1,250,929 - BWI76_RS05945 0.82 -1.0 1,251,378 - BWI76_RS05950 0.45 -0.1
Or see this region's nucleotide sequence