Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03800 and BWI76_RS03805 overlap by 1 nucleotides BWI76_RS03805 and BWI76_RS03810 are separated by 349 nucleotides BWI76_RS03810 and BWI76_RS03815 are separated by 11 nucleotides BWI76_RS03815 and BWI76_RS03820 are separated by 109 nucleotides
BWI76_RS03800: BWI76_RS03800 - hypothetical protein, at 786,417 to 786,737
_RS03800
BWI76_RS03805: BWI76_RS03805 - porin, at 786,737 to 787,282
_RS03805
BWI76_RS03810: BWI76_RS03810 - GTPase, at 787,632 to 788,588
_RS03810
BWI76_RS03815: BWI76_RS03815 - hypothetical protein, at 788,600 to 788,803
_RS03815
BWI76_RS03820: BWI76_RS03820 - carbon starvation protein A, at 788,913 to 791,063
_RS03820
Position (kb) 787
788
789 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 786.768 kb on - strand at 786.905 kb on + strand, within BWI76_RS03805 at 786.924 kb on + strand, within BWI76_RS03805 at 786.936 kb on + strand, within BWI76_RS03805 at 786.937 kb on - strand, within BWI76_RS03805 at 787.215 kb on + strand, within BWI76_RS03805 at 787.244 kb on + strand at 787.252 kb on - strand at 787.259 kb on - strand at 787.292 kb on - strand at 787.369 kb on - strand at 787.437 kb on - strand at 787.738 kb on - strand, within BWI76_RS03810 at 787.850 kb on + strand, within BWI76_RS03810 at 788.073 kb on - strand, within BWI76_RS03810 at 788.075 kb on - strand, within BWI76_RS03810 at 788.199 kb on + strand, within BWI76_RS03810 at 788.286 kb on - strand, within BWI76_RS03810 at 788.320 kb on - strand, within BWI76_RS03810 at 788.365 kb on + strand, within BWI76_RS03810 at 788.413 kb on + strand, within BWI76_RS03810 at 788.421 kb on - strand, within BWI76_RS03810 at 788.423 kb on + strand, within BWI76_RS03810 at 788.524 kb on - strand at 788.590 kb on - strand at 788.697 kb on + strand, within BWI76_RS03815 at 788.707 kb on + strand, within BWI76_RS03815 at 788.831 kb on + strand at 788.844 kb on + strand at 788.852 kb on - strand at 788.891 kb on - strand at 788.992 kb on - strand at 789.068 kb on - strand at 789.076 kb on + strand at 789.199 kb on + strand, within BWI76_RS03820 at 789.207 kb on - strand, within BWI76_RS03820 at 789.207 kb on - strand, within BWI76_RS03820 at 789.207 kb on - strand, within BWI76_RS03820 at 789.240 kb on - strand, within BWI76_RS03820 at 789.302 kb on + strand, within BWI76_RS03820 at 789.310 kb on - strand, within BWI76_RS03820 at 789.310 kb on - strand, within BWI76_RS03820 at 789.310 kb on - strand, within BWI76_RS03820 at 789.518 kb on + strand, within BWI76_RS03820
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 786,768 - -0.4 786,905 + BWI76_RS03805 0.31 -0.6 786,924 + BWI76_RS03805 0.34 +0.3 786,936 + BWI76_RS03805 0.36 -1.8 786,937 - BWI76_RS03805 0.37 +0.4 787,215 + BWI76_RS03805 0.88 +0.6 787,244 + -0.1 787,252 - -3.2 787,259 - +1.8 787,292 - -0.9 787,369 - +0.1 787,437 - +0.1 787,738 - BWI76_RS03810 0.11 +2.1 787,850 + BWI76_RS03810 0.23 +0.8 788,073 - BWI76_RS03810 0.46 +0.8 788,075 - BWI76_RS03810 0.46 -0.0 788,199 + BWI76_RS03810 0.59 +1.1 788,286 - BWI76_RS03810 0.68 +1.1 788,320 - BWI76_RS03810 0.72 +0.0 788,365 + BWI76_RS03810 0.77 +0.7 788,413 + BWI76_RS03810 0.82 +1.1 788,421 - BWI76_RS03810 0.82 +0.1 788,423 + BWI76_RS03810 0.83 +1.6 788,524 - -2.0 788,590 - +0.3 788,697 + BWI76_RS03815 0.48 -0.4 788,707 + BWI76_RS03815 0.52 +0.4 788,831 + +0.8 788,844 + -1.3 788,852 - -0.2 788,891 - -0.5 788,992 - +0.7 789,068 - -1.2 789,076 + +1.0 789,199 + BWI76_RS03820 0.13 -1.1 789,207 - BWI76_RS03820 0.14 +0.9 789,207 - BWI76_RS03820 0.14 +0.3 789,207 - BWI76_RS03820 0.14 +0.2 789,240 - BWI76_RS03820 0.15 -0.2 789,302 + BWI76_RS03820 0.18 -0.8 789,310 - BWI76_RS03820 0.18 -1.2 789,310 - BWI76_RS03820 0.18 +0.7 789,310 - BWI76_RS03820 0.18 -0.3 789,518 + BWI76_RS03820 0.28 -1.2
Or see this region's nucleotide sequence