Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30570

Experiment: Sucrose (C) and Glycine betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with MOPS
2,109,177	+		PFLU_RS09550	0.14	+0.4
2,109,177	+		PFLU_RS09550	0.14	+0.2
2,109,178	-		PFLU_RS09550	0.15	-0.5
2,109,178	-		PFLU_RS09550	0.15	-0.4
2,109,178	-		PFLU_RS09550	0.15	+0.3
2,109,221	-		PFLU_RS09550	0.27	+1.1
2,109,221	-		PFLU_RS09550	0.27	-0.2
2,109,228	+		PFLU_RS09550	0.29	-0.6
2,109,410	+		PFLU_RS09550	0.84	-0.0
2,109,483	+				-0.6
2,109,502	+				+0.3
2,109,502	+				+0.4
2,109,502	+				-0.3
2,109,502	+				+0.6
2,109,502	+				+0.5
2,109,502	+				-0.6
2,109,502	+				-0.8
2,109,502	+				+0.3
2,109,503	-				+0.8
2,109,503	-				-1.1
2,109,503	-				+0.8
2,109,503	-				-0.3
2,109,503	-				-0.1
2,109,503	-				-1.3
2,109,506	-				-3.3
2,109,506	-				+0.3
2,109,506	-				+0.3
2,109,506	-				-0.6
2,109,575	+				-0.2
2,109,575	+				+0.5
2,109,575	+				+0.6
2,109,575	+				+1.0
2,109,576	-				-1.5
2,109,576	-				-0.2
2,109,576	-				-0.7
2,109,576	-				+0.5
2,109,576	-				+0.0
2,109,576	-				+0.7
2,109,585	+				+0.1
2,109,585	+				-0.6
2,109,585	+				+0.1
2,109,585	+				-0.5
2,109,586	-				+0.8
2,109,586	-				+0.4
2,109,586	-				+0.3
2,109,586	-				-0.2
2,109,712	+				-1.0
2,109,712	+				-0.3
2,109,712	+				-0.7
2,109,713	-				-0.2
2,109,713	-				+0.4
2,109,713	-				-0.1
2,109,713	-				+0.6
2,109,713	-				-0.2
2,109,713	-				-2.2
2,109,724	+				-0.0
2,109,724	+				-0.8
2,109,724	+				+0.2
2,109,724	+				-0.1
2,109,725	-				+1.8
2,109,737	+				+0.3
2,109,737	+				-0.8
2,109,737	+				+0.5
2,109,738	-				-0.3
2,109,738	-				-0.2
2,109,738	-				-0.6
2,109,738	-				+0.9
2,109,832	-				+0.2
2,109,832	-				-0.5
2,109,832	-				-0.9
2,109,832	-				+0.1
2,109,848	-				-0.2
2,109,875	+				-2.6
2,109,956	+				+0.1
2,109,956	+				-0.4
2,109,956	+				+1.1
2,109,957	-				-0.3
2,109,957	-				+0.9
2,109,957	-				+1.3
2,110,010	-				+0.7
2,110,051	+				-0.9
2,110,051	+				+1.0
2,110,051	+				-2.4
2,110,052	-				-0.2
2,110,052	-				+0.4
2,110,052	-				-2.7
2,110,052	-				-1.2
2,110,079	+				+0.0
2,110,079	+				-0.4
2,110,080	-		PFLU_RS30570	0.10	+0.9
2,110,080	-		PFLU_RS30570	0.10	+1.1
2,110,155	+		PFLU_RS30570	0.35	+0.5
2,110,155	+		PFLU_RS30570	0.35	+0.2
2,110,155	+		PFLU_RS30570	0.35	-0.5
2,110,156	-		PFLU_RS30570	0.35	-0.2
2,110,169	+		PFLU_RS30570	0.40	+0.5
2,110,169	+		PFLU_RS30570	0.40	+0.4
2,110,169	+		PFLU_RS30570	0.40	-0.2
2,110,217	+		PFLU_RS30570	0.56	+0.4
2,110,218	-		PFLU_RS30570	0.56	-0.4
2,110,241	-		PFLU_RS30570	0.64	+1.5
2,110,241	-		PFLU_RS30570	0.64	+2.3
2,110,241	-		PFLU_RS30570	0.64	-0.0
2,110,341	-				-1.6
2,110,404	+				-0.3
2,110,404	+				-1.3
2,110,404	+				+1.3
2,110,404	+				-0.1
2,110,404	+				+0.7
2,110,404	+				-1.1
2,110,405	-				-0.4
2,110,405	-				+0.8
2,110,405	-				-0.4
2,110,418	+				+0.1
2,110,418	+				+0.4
2,110,418	+				+0.3
2,110,418	+				+0.1
2,110,419	-				+0.4
2,110,419	-				+0.0
2,110,506	+		PFLU_RS31260	0.15	-0.3
2,110,623	-		PFLU_RS31260	0.37	+0.1
2,110,637	+		PFLU_RS31260	0.40	+1.3
2,110,637	+		PFLU_RS31260	0.40	+0.5
2,110,637	+		PFLU_RS31260	0.40	+0.2
2,110,646	+		PFLU_RS31260	0.42	+0.7
2,110,647	-		PFLU_RS31260	0.42	+0.3
2,110,647	-		PFLU_RS31260	0.42	-0.1
2,110,675	-		PFLU_RS31260	0.47	+0.5
2,110,708	+		PFLU_RS31260	0.54	-0.7
2,110,711	+		PFLU_RS31260	0.54	+0.2
2,110,711	+		PFLU_RS31260	0.54	-0.1
2,110,711	+		PFLU_RS31260	0.54	+0.7
2,110,711	+		PFLU_RS31260	0.54	-1.2
2,110,711	+		PFLU_RS31260	0.54	-0.8
2,110,712	-		PFLU_RS31260	0.54	-0.2
2,110,712	-		PFLU_RS31260	0.54	-0.7
2,110,712	-		PFLU_RS31260	0.54	-0.7
2,110,712	-		PFLU_RS31260	0.54	+0.0
2,110,723	+		PFLU_RS31260	0.57	+0.3
2,110,723	+		PFLU_RS31260	0.57	-0.5
2,110,763	+		PFLU_RS31260	0.64	+0.3
2,110,764	-		PFLU_RS31260	0.65	+0.1
2,110,780	+		PFLU_RS31260	0.68	-0.1
2,110,780	+		PFLU_RS31260	0.68	-1.0
2,110,780	+		PFLU_RS31260	0.68	-0.5
2,110,781	-		PFLU_RS31260	0.68	-0.4
2,110,782	+		PFLU_RS31260	0.68	-0.4
2,110,790	+		PFLU_RS31260	0.70	+0.2
2,110,791	-		PFLU_RS31260	0.70	-1.2
2,110,791	-		PFLU_RS31260	0.70	-1.8
2,110,804	+		PFLU_RS31260	0.72	+1.3
2,110,804	+		PFLU_RS31260	0.72	+0.2
2,110,805	-		PFLU_RS31260	0.72	+0.0
2,110,805	-		PFLU_RS31260	0.72	+0.0
2,110,805	-		PFLU_RS31260	0.72	-0.7
2,110,856	+		PFLU_RS31260	0.82	-1.3
2,110,857	-		PFLU_RS31260	0.83	-0.4
2,110,898	+				+0.1
2,110,898	+				-0.0
2,110,898	+				-1.3
2,110,898	+				+1.9
2,110,898	+				-0.3
2,110,898	+				+0.3
2,110,898	+				-0.1
2,110,898	+				-1.4
2,110,898	+				+0.1
2,110,898	+				-0.3
2,110,898	+				+0.6
2,110,898	+				-0.1
2,110,899	-				+1.4
2,110,899	-				-0.7
2,110,899	-				+0.5
2,110,899	-				+0.0
2,110,899	-				-1.2
2,110,899	-				+0.4
2,110,900	+				+1.0
2,110,900	+				-0.8
2,110,900	+				+0.7
2,110,900	+				-0.1
2,110,900	+				-0.4
2,110,900	+				-0.4
2,110,900	+				-0.9
2,110,901	-				+0.8
2,110,901	-				-0.1
2,110,901	-				-0.5
2,110,902	+				-0.2
2,110,902	+				-0.6
2,110,902	+				+0.5
2,110,902	+				-1.0
2,110,902	+				+0.2
2,110,902	+				+0.3
2,110,902	+				-0.7
2,110,902	+				-0.2
2,110,902	+				+0.9
2,110,902	+				+1.0
2,110,903	-				-0.5
2,110,903	-				+0.3
2,110,903	-				+0.2
2,110,940	+				-1.0
2,110,941	-				+0.2
2,110,941	-				-1.1
2,110,962	+				-0.2
2,110,963	-				+0.5
2,110,963	-				+0.6
2,110,972	+				+1.5
2,110,972	+				-0.3
2,110,972	+				-0.2
2,110,972	+				-0.2
2,110,972	+				+0.1
2,110,972	+				-0.6
2,110,973	-				-0.4
2,110,973	-				-0.2
2,110,973	-				+0.8
2,110,973	-				+0.2
2,111,019	-				+1.7
2,111,031	+				-0.9
2,111,032	-				-0.7
2,111,032	-				+1.0
2,111,061	+				-0.6
2,111,061	+				+1.2
2,111,061	+				+0.3
2,111,061	+				+2.2
2,111,061	+				-0.1
2,111,061	+				+0.2
2,111,062	-				-0.1
2,111,062	-				+0.4
2,111,062	-				-0.2
2,111,081	+				+0.9
2,111,081	+				+1.3
2,111,081	+				-1.7
2,111,082	-				-0.1
2,111,107	+				+0.4
2,111,108	-				-0.0
2,111,108	-				-1.6
2,111,125	-				+1.2
2,111,130	+				-0.5
2,111,130	+				-0.5
2,111,131	-				-1.2
2,111,131	-				+0.6
2,111,149	+				-0.8
2,111,149	+				+1.7
2,111,149	+				+0.2
2,111,149	+				-0.3
2,111,149	+				-1.0
2,111,149	+				+0.6
2,111,150	-				+0.7
2,111,150	-				+0.2
2,111,150	-				+0.3
2,111,150	-				+0.4
2,111,173	+				-0.4
2,111,173	+				-0.8
2,111,173	+				+0.2
2,111,174	-				+0.9
2,111,174	-				-2.2
2,111,174	-				+0.5
2,111,174	-				+0.0
2,111,231	-				-0.3
2,111,249	+				-0.1
2,111,249	+				+0.6
2,111,249	+				+0.6
2,111,287	-				+0.7
2,111,287	-				+0.1
2,111,287	-				+0.1
2,111,298	-				+0.1
2,111,298	-				-1.0
2,111,298	-				+0.6
2,111,298	-				-0.5
2,111,335	+				+0.6
2,111,335	+				+0.4
2,111,335	+				-0.6
2,111,335	+				+0.4
2,111,336	-				+0.7
2,111,336	-				-0.6