Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29560

Experiment: Sucrose (C) and Glycine betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with MOPS
6,560,247	+		PFLU_RS29555	0.51	+0.5
6,560,250	+		PFLU_RS29555	0.51	-1.4
6,560,250	+		PFLU_RS29555	0.51	+0.6
6,560,250	+		PFLU_RS29555	0.51	+0.2
6,560,250	+		PFLU_RS29555	0.51	-0.8
6,560,250	+		PFLU_RS29555	0.51	+1.5
6,560,251	-		PFLU_RS29555	0.51	+0.0
6,560,251	-		PFLU_RS29555	0.51	-0.4
6,560,394	+		PFLU_RS29555	0.62	+0.0
6,560,395	-		PFLU_RS29555	0.62	-1.6
6,560,395	-		PFLU_RS29555	0.62	+0.6
6,560,412	+		PFLU_RS29555	0.63	-0.0
6,560,412	+		PFLU_RS29555	0.63	-0.7
6,560,412	+		PFLU_RS29555	0.63	-1.9
6,560,412	+		PFLU_RS29555	0.63	-0.4
6,560,412	+		PFLU_RS29555	0.63	-0.8
6,560,413	-		PFLU_RS29555	0.63	+0.8
6,560,413	-		PFLU_RS29555	0.63	-1.2
6,560,413	-		PFLU_RS29555	0.63	-1.4
6,560,413	-		PFLU_RS29555	0.63	+0.8
6,560,413	-		PFLU_RS29555	0.63	-0.2
6,560,413	-		PFLU_RS29555	0.63	+1.4
6,560,413	-		PFLU_RS29555	0.63	+2.2
6,560,413	-		PFLU_RS29555	0.63	+0.0
6,560,484	+		PFLU_RS29555	0.68	-2.4
6,560,484	+		PFLU_RS29555	0.68	+0.2
6,560,484	+		PFLU_RS29555	0.68	+0.2
6,560,485	-		PFLU_RS29555	0.68	-0.2
6,560,485	-		PFLU_RS29555	0.68	+0.7
6,560,485	-		PFLU_RS29555	0.68	-1.7
6,560,485	-		PFLU_RS29555	0.68	+2.0
6,560,485	-		PFLU_RS29555	0.68	-0.4
6,560,485	-		PFLU_RS29555	0.68	-0.5
6,560,514	+		PFLU_RS29555	0.70	+0.0
6,560,598	+		PFLU_RS29555	0.76	+0.4
6,560,598	+		PFLU_RS29555	0.76	+0.8
6,560,598	+		PFLU_RS29555	0.76	-2.4
6,560,598	+		PFLU_RS29555	0.76	+1.4
6,560,598	+		PFLU_RS29555	0.76	-1.3
6,560,598	+		PFLU_RS29555	0.76	-0.1
6,560,598	+		PFLU_RS29555	0.76	+0.3
6,560,598	+		PFLU_RS29555	0.76	-0.8
6,560,598	+		PFLU_RS29555	0.76	+0.3
6,560,598	+		PFLU_RS29555	0.76	-0.9
6,560,598	+		PFLU_RS29555	0.76	-0.9
6,560,598	+		PFLU_RS29555	0.76	+0.3
6,560,598	+		PFLU_RS29555	0.76	-1.2
6,560,598	+		PFLU_RS29555	0.76	+1.2
6,560,598	+		PFLU_RS29555	0.76	-0.9
6,560,598	+		PFLU_RS29555	0.76	+1.2
6,560,598	+		PFLU_RS29555	0.76	+0.8
6,560,598	+		PFLU_RS29555	0.76	+0.2
6,560,599	-		PFLU_RS29555	0.76	-0.9
6,560,599	-		PFLU_RS29555	0.76	+1.0
6,560,599	-		PFLU_RS29555	0.76	-1.8
6,560,599	-		PFLU_RS29555	0.76	+0.5
6,560,599	-		PFLU_RS29555	0.76	+1.9
6,560,599	-		PFLU_RS29555	0.76	+0.1
6,560,599	-		PFLU_RS29555	0.76	+0.6
6,560,599	-		PFLU_RS29555	0.76	-0.5
6,560,599	-		PFLU_RS29555	0.76	+0.3
6,560,599	-		PFLU_RS29555	0.76	-0.0
6,560,599	-		PFLU_RS29555	0.76	-0.7
6,560,599	-		PFLU_RS29555	0.76	+0.1
6,560,599	-		PFLU_RS29555	0.76	-0.6
6,560,599	-		PFLU_RS29555	0.76	-0.1
6,560,599	-		PFLU_RS29555	0.76	-0.7
6,560,599	-		PFLU_RS29555	0.76	-0.2
6,560,715	+		PFLU_RS29555	0.85	-0.4
6,560,715	+		PFLU_RS29555	0.85	-0.3
6,560,716	-		PFLU_RS29555	0.85	-0.4
6,560,716	-		PFLU_RS29555	0.85	+0.4
6,560,716	-		PFLU_RS29555	0.85	-2.6
6,560,716	-		PFLU_RS29555	0.85	-1.9
6,560,716	-		PFLU_RS29555	0.85	-0.9
6,560,716	-		PFLU_RS29555	0.85	+0.5
6,560,727	+		PFLU_RS29555	0.85	+3.0
6,560,727	+		PFLU_RS29555	0.85	+1.2
6,560,727	+		PFLU_RS29555	0.85	+0.3
6,560,727	+		PFLU_RS29555	0.85	+0.5
6,560,727	+		PFLU_RS29555	0.85	-0.4
6,560,727	+		PFLU_RS29555	0.85	+0.5
6,560,728	-		PFLU_RS29555	0.86	+1.4
6,560,728	-		PFLU_RS29555	0.86	-0.2
6,560,728	-		PFLU_RS29555	0.86	+0.6
6,560,736	+		PFLU_RS29555	0.86	-0.9
6,560,937	-				+0.9
6,560,944	+				+0.6
6,560,944	+				+0.0
6,560,945	-				+0.5
6,560,945	-				+0.4
6,560,945	-				+0.9
6,561,040	+				+0.4
6,561,040	+				-0.2
6,561,041	-				-0.1
6,561,041	-				+0.0
6,561,041	-				+0.1
6,561,041	-				-0.9
6,561,041	-				-0.0
6,561,064	+				-0.3
6,561,064	+				+0.6
6,561,064	+				-0.5
6,561,065	-				-0.3
6,561,065	-				-0.4
6,561,065	-				+0.5
6,561,065	-				-0.3
6,561,065	-				+0.1
6,561,065	-				-2.6
6,561,187	+		PFLU_RS29560	0.39	+0.0
6,561,209	+		PFLU_RS29560	0.45	+1.1
6,561,430	+				+0.1
6,561,430	+				-1.6
6,561,430	+				-0.6
6,561,430	+				+0.3
6,561,430	+				-0.9
6,561,430	+				+0.6
6,561,431	-				+0.8
6,561,431	-				+0.0
6,561,434	+				+0.9
6,561,434	+				+0.6
6,561,434	+				+1.0
6,561,434	+				+1.0
6,561,434	+				-0.3
6,561,434	+				+0.1
6,561,434	+				-0.2
6,561,434	+				-0.4
6,561,435	-				-0.2
6,561,435	-				+0.0
6,561,522	+				+0.4
6,561,522	+				-0.8
6,561,523	-				+1.3
6,561,523	-				-1.4
6,561,524	+				+0.1
6,561,524	+				-0.8
6,561,525	-				-0.5
6,561,697	+		PFLU_RS29565	0.17	+0.1
6,561,697	+		PFLU_RS29565	0.17	+1.0
6,561,698	-		PFLU_RS29565	0.17	+0.5
6,561,698	-		PFLU_RS29565	0.17	+0.2
6,561,698	-		PFLU_RS29565	0.17	-0.5
6,561,698	-		PFLU_RS29565	0.17	-0.4
6,561,698	-		PFLU_RS29565	0.17	-1.3
6,561,698	-		PFLU_RS29565	0.17	-0.5
6,561,772	+		PFLU_RS29565	0.25	+0.6
6,561,772	+		PFLU_RS29565	0.25	-0.1
6,561,772	+		PFLU_RS29565	0.25	+0.8
6,561,772	+		PFLU_RS29565	0.25	+0.4
6,561,772	+		PFLU_RS29565	0.25	+0.1
6,561,772	+		PFLU_RS29565	0.25	-0.5
6,561,772	+		PFLU_RS29565	0.25	-0.1
6,561,772	+		PFLU_RS29565	0.25	-0.0
6,561,773	-		PFLU_RS29565	0.25	-0.3
6,561,773	-		PFLU_RS29565	0.25	+0.1
6,561,773	-		PFLU_RS29565	0.25	+0.9
6,561,773	-		PFLU_RS29565	0.25	-0.1
6,561,773	-		PFLU_RS29565	0.25	-0.9
6,561,773	-		PFLU_RS29565	0.25	+0.8
6,561,773	-		PFLU_RS29565	0.25	-0.9
6,561,773	-		PFLU_RS29565	0.25	+0.2
6,561,805	-		PFLU_RS29565	0.29	+0.6
6,561,811	+		PFLU_RS29565	0.29	+0.7
6,561,811	+		PFLU_RS29565	0.29	+0.2
6,561,812	-		PFLU_RS29565	0.30	-0.9
6,561,839	+		PFLU_RS29565	0.32	-0.8
6,561,851	+		PFLU_RS29565	0.34	-1.1
6,561,851	+		PFLU_RS29565	0.34	+1.7
6,561,851	+		PFLU_RS29565	0.34	+0.6
6,561,851	+		PFLU_RS29565	0.34	-0.5
6,561,851	+		PFLU_RS29565	0.34	-0.8
6,561,851	+		PFLU_RS29565	0.34	+0.0
6,561,851	+		PFLU_RS29565	0.34	+0.5
6,561,851	+		PFLU_RS29565	0.34	+0.2
6,561,851	+		PFLU_RS29565	0.34	+0.4
6,561,852	-		PFLU_RS29565	0.34	-0.2
6,561,852	-		PFLU_RS29565	0.34	-1.3
6,561,852	-		PFLU_RS29565	0.34	-0.4
6,561,852	-		PFLU_RS29565	0.34	-0.6
6,561,852	-		PFLU_RS29565	0.34	+0.6
6,561,852	-		PFLU_RS29565	0.34	+0.8
6,561,852	-		PFLU_RS29565	0.34	-0.2
6,561,852	-		PFLU_RS29565	0.34	-0.3
6,561,852	-		PFLU_RS29565	0.34	-0.7
6,561,852	-		PFLU_RS29565	0.34	+0.5
6,561,876	+		PFLU_RS29565	0.36	+0.5
6,561,877	-		PFLU_RS29565	0.37	+0.1
6,562,010	+		PFLU_RS29565	0.51	-0.5
6,562,010	+		PFLU_RS29565	0.51	+0.5
6,562,034	+		PFLU_RS29565	0.54	-0.2
6,562,035	-		PFLU_RS29565	0.54	+0.9
6,562,035	-		PFLU_RS29565	0.54	-1.0
6,562,085	+		PFLU_RS29565	0.59	-0.6
6,562,085	+		PFLU_RS29565	0.59	-0.6
6,562,085	+		PFLU_RS29565	0.59	-0.2
6,562,085	+		PFLU_RS29565	0.59	-0.3
6,562,085	+		PFLU_RS29565	0.59	-0.0
6,562,086	-		PFLU_RS29565	0.59	+1.5
6,562,086	-		PFLU_RS29565	0.59	+0.3
6,562,095	+		PFLU_RS29565	0.60	-1.9
6,562,095	+		PFLU_RS29565	0.60	+1.1
6,562,095	+		PFLU_RS29565	0.60	-1.6
6,562,095	+		PFLU_RS29565	0.60	+0.4
6,562,096	-		PFLU_RS29565	0.60	-0.2
6,562,096	-		PFLU_RS29565	0.60	-0.0
6,562,136	+		PFLU_RS29565	0.65	-0.1
6,562,136	+		PFLU_RS29565	0.65	+0.3
6,562,136	+		PFLU_RS29565	0.65	+0.5
6,562,136	+		PFLU_RS29565	0.65	-0.2
6,562,136	+		PFLU_RS29565	0.65	+1.1
6,562,136	+		PFLU_RS29565	0.65	-2.2
6,562,136	+		PFLU_RS29565	0.65	-1.5
6,562,136	+		PFLU_RS29565	0.65	-0.6
6,562,136	+		PFLU_RS29565	0.65	-1.9
6,562,136	+		PFLU_RS29565	0.65	+0.9
6,562,136	+		PFLU_RS29565	0.65	+0.2
6,562,136	+		PFLU_RS29565	0.65	-0.5
6,562,136	+		PFLU_RS29565	0.65	-0.6
6,562,137	-		PFLU_RS29565	0.65	-0.7
6,562,137	-		PFLU_RS29565	0.65	+0.6
6,562,137	-		PFLU_RS29565	0.65	+0.2
6,562,137	-		PFLU_RS29565	0.65	+0.2
6,562,137	-		PFLU_RS29565	0.65	+0.6
6,562,137	-		PFLU_RS29565	0.65	+0.9
6,562,137	-		PFLU_RS29565	0.65	+0.9
6,562,137	-		PFLU_RS29565	0.65	+0.1
6,562,137	-		PFLU_RS29565	0.65	-0.0
6,562,139	+		PFLU_RS29565	0.65	+0.2
6,562,322	+		PFLU_RS29565	0.85	+0.0
6,562,322	+		PFLU_RS29565	0.85	-0.3
6,562,323	-		PFLU_RS29565	0.85	-0.5
6,562,337	+		PFLU_RS29565	0.86	+0.0
6,562,338	-		PFLU_RS29565	0.86	-0.4
6,562,338	-		PFLU_RS29565	0.86	+0.2