Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26800

Experiment: Sucrose (C) and Glycine betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with MOPS
5,983,700	+		PFLU_RS31335	0.81	-0.5
5,983,755	+				+0.7
5,983,756	-				+0.4
5,983,789	+				+0.4
5,983,789	+				+0.9
5,983,789	+				-0.2
5,983,789	+				+1.9
5,983,789	+				-1.5
5,983,790	-				-0.5
5,983,790	-				+0.4
5,983,790	-				-0.2
5,983,790	-				+0.3
5,983,790	-				-0.4
5,983,790	-				-0.4
5,983,835	+				-1.8
5,983,835	+				+0.3
5,983,835	+				+0.2
5,983,835	+				+1.7
5,983,835	+				-0.4
5,983,835	+				+0.5
5,983,836	-				-0.3
5,983,836	-				+0.7
5,983,836	-				+0.9
5,983,853	+				+0.7
5,983,867	+				-0.3
5,983,867	+				+0.5
5,983,867	+				-0.5
5,983,867	+				+1.4
5,983,867	+				+0.9
5,983,868	-				+0.4
5,983,868	-				+0.0
5,983,868	-				-1.3
5,983,868	-				-0.5
5,983,878	-				-0.1
5,983,934	-				-0.4
5,983,934	-				-0.1
5,983,944	+				+1.1
5,983,944	+				+0.2
5,983,945	-				+0.0
5,983,945	-				-0.1
5,983,945	-				-0.8
5,983,959	+				+1.0
5,983,959	+				-1.4
5,983,959	+				-0.9
5,983,959	+				-0.2
5,983,959	+				-0.3
5,983,959	+				-0.2
5,983,959	+				-0.5
5,983,959	+				+0.4
5,983,960	-				+0.4
5,983,960	-				-0.6
5,983,960	-				-0.2
5,983,960	-				-0.2
5,983,960	-				+0.8
5,983,960	-				-0.1
5,983,960	-				-0.6
5,983,960	-				+0.5
5,983,960	-				+0.9
5,983,960	-				+0.6
5,983,960	-				-0.5
5,983,960	-				+0.6
5,983,980	+				-0.2
5,983,980	+				+0.5
5,983,980	+				-0.3
5,983,980	+				+0.4
5,983,980	+				-0.0
5,983,980	+				+1.5
5,983,981	-				+0.2
5,983,981	-				-0.5
5,983,981	-				+0.5
5,983,981	-				+1.6
5,983,981	-				+0.3
5,983,981	-				+0.2
5,983,981	-				+0.1
5,983,981	-				-2.1
5,984,067	+				-0.4
5,984,067	+				-0.3
5,984,067	+				+0.2
5,984,067	+				+0.7
5,984,067	+				+0.5
5,984,067	+				-1.0
5,984,067	+				-0.7
5,984,067	+				+2.7
5,984,067	+				-0.2
5,984,068	-				-1.0
5,984,068	-				+0.1
5,984,068	-				+0.3
5,984,068	-				+0.5
5,984,068	-				+0.6
5,984,068	-				+0.5
5,984,068	-				+0.2
5,984,068	-				-0.1
5,984,068	-				+1.1
5,984,162	+		PFLU_RS31155	0.16	-0.1
5,984,224	+		PFLU_RS31155	0.27	+0.4
5,984,225	-		PFLU_RS31155	0.28	-0.8
5,984,235	-		PFLU_RS31155	0.29	-0.7
5,984,235	-		PFLU_RS31155	0.29	+0.5
5,984,235	-		PFLU_RS31155	0.29	-0.1
5,984,238	-		PFLU_RS31155	0.30	-1.2
5,984,244	+		PFLU_RS31155	0.31	-0.3
5,984,244	+		PFLU_RS31155	0.31	-0.7
5,984,244	+		PFLU_RS31155	0.31	-1.4
5,984,244	+		PFLU_RS31155	0.31	-0.0
5,984,245	-		PFLU_RS31155	0.31	-0.8
5,984,245	-		PFLU_RS31155	0.31	-2.1
5,984,245	-		PFLU_RS31155	0.31	+0.4
5,984,245	-		PFLU_RS31155	0.31	+0.1
5,984,245	-		PFLU_RS31155	0.31	+0.4
5,984,245	-		PFLU_RS31155	0.31	+0.4
5,984,247	+		PFLU_RS31155	0.31	+1.1
5,984,247	+		PFLU_RS31155	0.31	+0.5
5,984,247	+		PFLU_RS31155	0.31	-0.4
5,984,247	+		PFLU_RS31155	0.31	-0.4
5,984,247	+		PFLU_RS31155	0.31	-0.7
5,984,247	+		PFLU_RS31155	0.31	-0.0
5,984,247	+		PFLU_RS31155	0.31	+1.9
5,984,247	+		PFLU_RS31155	0.31	+0.4
5,984,247	+		PFLU_RS31155	0.31	-0.6
5,984,247	+		PFLU_RS31155	0.31	-1.7
5,984,248	-		PFLU_RS31155	0.32	-0.1
5,984,248	-		PFLU_RS31155	0.32	+1.1
5,984,248	-		PFLU_RS31155	0.32	-0.9
5,984,248	-		PFLU_RS31155	0.32	-0.5
5,984,248	-		PFLU_RS31155	0.32	-0.5
5,984,248	-		PFLU_RS31155	0.32	-1.5
5,984,248	-		PFLU_RS31155	0.32	-0.3
5,984,248	-		PFLU_RS31155	0.32	+0.3
5,984,248	-		PFLU_RS31155	0.32	-1.2
5,984,248	-		PFLU_RS31155	0.32	+0.7
5,984,291	+		PFLU_RS31155	0.39	+0.3
5,984,291	+		PFLU_RS31155	0.39	-0.3
5,984,291	+		PFLU_RS31155	0.39	-0.7
5,984,291	+		PFLU_RS31155	0.39	-0.3
5,984,291	+		PFLU_RS31155	0.39	+0.0
5,984,291	+		PFLU_RS31155	0.39	+0.6
5,984,291	+		PFLU_RS31155	0.39	+0.3
5,984,291	+		PFLU_RS31155	0.39	+0.1
5,984,291	+		PFLU_RS31155	0.39	+0.5
5,984,291	+		PFLU_RS31155	0.39	-0.6
5,984,291	+		PFLU_RS31155	0.39	+0.4
5,984,291	+		PFLU_RS31155	0.39	-1.4
5,984,291	+		PFLU_RS31155	0.39	+0.8
5,984,292	-		PFLU_RS31155	0.39	+1.1
5,984,292	-		PFLU_RS31155	0.39	+0.6
5,984,292	-		PFLU_RS31155	0.39	-1.1
5,984,292	-		PFLU_RS31155	0.39	+1.5
5,984,292	-		PFLU_RS31155	0.39	+0.4
5,984,292	-		PFLU_RS31155	0.39	+0.3
5,984,292	-		PFLU_RS31155	0.39	-1.8
5,984,292	-		PFLU_RS31155	0.39	+0.5
5,984,292	-		PFLU_RS31155	0.39	-0.5
5,984,292	-		PFLU_RS31155	0.39	+0.2
5,984,292	-		PFLU_RS31155	0.39	+1.0
5,984,358	+		PFLU_RS31155	0.51	+0.2
5,984,405	+		PFLU_RS31155	0.60	-0.4
5,984,406	-		PFLU_RS31155	0.60	+0.8
5,984,406	-		PFLU_RS31155	0.60	-0.0
5,984,406	-		PFLU_RS31155	0.60	+0.5
5,984,418	+		PFLU_RS31155	0.62	+1.1
5,984,419	-		PFLU_RS31155	0.62	+0.6
5,984,419	-		PFLU_RS31155	0.62	+1.2
5,984,444	+		PFLU_RS31155	0.66	-0.1
5,984,524	+		PFLU_RS31155	0.81	-0.3
5,984,525	-		PFLU_RS31155	0.81	-0.7
5,984,525	-		PFLU_RS31155	0.81	-1.0
5,984,525	-		PFLU_RS31155	0.81	+0.2
5,984,525	-		PFLU_RS31155	0.81	+0.6
5,984,535	+		PFLU_RS31155	0.83	-0.4
5,984,536	-		PFLU_RS31155	0.83	-0.0
5,984,536	-		PFLU_RS31155	0.83	-0.3
5,984,592	+				-1.4
5,984,592	+				+0.7
5,984,592	+				+0.6
5,984,592	+				+0.0
5,984,592	+				-0.2
5,984,592	+				-0.3
5,984,593	-				+1.1
5,984,593	-				-0.5
5,984,593	-				+0.3
5,984,593	-				-1.1
5,984,622	+				+1.1
5,984,622	+				+0.8
5,984,624	+				+0.5
5,984,624	+				-0.8
5,984,624	+				-1.0
5,984,625	-				-0.7
5,984,625	-				+0.4
5,984,625	-				+0.4
5,984,625	-				+1.0
5,984,625	-				+1.2
5,984,625	-				+0.1
5,984,625	-				+0.0
5,984,625	-				+1.4
5,984,625	-				+0.1
5,984,625	-				-0.6
5,984,641	+				-0.4
5,984,641	+				+0.9
5,984,641	+				-0.2
5,984,642	-				-0.3
5,984,642	-				+0.1
5,984,642	-				+0.4
5,984,642	-				-0.8
5,984,690	+				-1.7
5,984,690	+				-1.1
5,984,690	+				+0.1
5,984,691	-				+0.2
5,984,691	-				-0.2
5,984,691	-				+0.3
5,984,694	+				-0.4
5,984,694	+				+0.1
5,984,694	+				+1.4
5,984,695	-				+0.3
5,984,695	-				+0.1
5,984,695	-				-0.2
5,984,695	-				+0.7
5,984,695	-				+0.1
5,984,703	+				-1.1
5,984,703	+				-0.2
5,984,703	+				-0.7
5,984,703	+				-0.4
5,984,703	+				+0.1
5,984,703	+				+0.3
5,984,703	+				+0.6
5,984,703	+				-1.5
5,984,703	+				+0.7
5,984,703	+				-1.0
5,984,703	+				-0.4
5,984,703	+				+0.4
5,984,703	+				-0.6
5,984,703	+				-0.2
5,984,703	+				+0.2
5,984,704	-				-0.4
5,984,704	-				-0.3
5,984,704	-				+1.0
5,984,704	-				-0.3
5,984,704	-				-0.9
5,984,704	-				+1.6
5,984,704	-				+0.8
5,984,704	-				+0.8
5,984,704	-				+1.0
5,984,704	-				-1.1
5,984,704	-				+1.1
5,984,803	-		PFLU_RS26800	0.48	+0.0
5,984,803	-		PFLU_RS26800	0.48	-1.2
5,984,803	-		PFLU_RS26800	0.48	+0.7
5,984,874	+		PFLU_RS26800	0.78	+0.6
5,984,874	+		PFLU_RS26800	0.78	-2.0
5,984,874	+		PFLU_RS26800	0.78	+0.7
5,984,874	+		PFLU_RS26800	0.78	+0.5
5,984,875	-		PFLU_RS26800	0.78	+0.6
5,984,875	-		PFLU_RS26800	0.78	+1.2
5,984,875	-		PFLU_RS26800	0.78	-0.6
5,984,875	-		PFLU_RS26800	0.78	+0.3
5,984,875	-		PFLU_RS26800	0.78	-0.3
5,984,919	+				-1.0
5,984,919	+				-0.9
5,984,919	+				-0.5
5,984,919	+				-0.8
5,984,919	+				-0.8
5,984,919	+				+0.5
5,984,919	+				-0.4
5,984,919	+				-0.0
5,984,925	+				+0.0
5,984,937	+				-0.1
5,984,943	+				+0.3
5,984,943	+				-0.6
5,984,944	-				-0.4
5,984,951	+				-0.3
5,984,951	+				+0.6
5,984,951	+				-1.4
5,984,951	+				-0.0
5,984,951	+				+0.7
5,984,951	+				-0.8
5,984,951	+				-1.5
5,984,951	+				-0.5
5,984,951	+				-0.8
5,984,951	+				+1.1
5,984,952	-				+0.4
5,984,952	-				+1.1
5,984,971	+				+0.5
5,984,971	+				+0.5
5,984,994	+				-1.9
5,984,994	+				+0.6
5,984,995	-				+0.1
5,984,995	-				+0.7
5,985,003	+				-0.6
5,985,003	+				+0.1
5,985,060	+				+2.2
5,985,060	+				-0.7
5,985,060	+				+0.4
5,985,060	+				+0.7
5,985,060	+				+1.3
5,985,061	-				+1.5
5,985,061	-				-0.6
5,985,061	-				-0.2
5,985,061	-				-0.7
5,985,071	+				-0.2
5,985,072	-				+1.0
5,985,072	-				-0.1
5,985,072	-				+0.7
5,985,090	+				-1.8
5,985,090	+				-0.2
5,985,090	+				-0.4
5,985,091	-				-0.4
5,985,091	-				-0.1
5,985,091	-				-0.9
5,985,142	+				+0.1
5,985,142	+				+3.0
5,985,142	+				+0.9
5,985,142	+				-0.3
5,985,143	-				-0.2
5,985,143	-				-2.0
5,985,143	-				+0.6
5,985,164	+				-0.4
5,985,165	-				+1.5
5,985,165	-				+0.5
5,985,264	-				+2.0
5,985,276	+				-1.0
5,985,276	+				+1.5
5,985,277	-				-1.0
5,985,280	-				-0.6
5,985,283	+				+0.8
5,985,284	-				+0.3
5,985,284	-				+1.0
5,985,284	-				+0.1
5,985,319	-				-1.1
5,985,323	+				-0.0
5,985,323	+				+0.7
5,985,323	+				-1.1
5,985,324	-				-0.6
5,985,324	-				-1.8
5,985,324	-				-0.1
5,985,353	+				-0.3
5,985,353	+				+0.4
5,985,353	+				+1.2
5,985,353	+				+0.4
5,985,353	+				-1.0
5,985,353	+				+0.9
5,985,354	-				+0.4
5,985,354	-				+0.1
5,985,354	-				+0.8
5,985,354	-				-0.8
5,985,357	+				+1.4
5,985,357	+				-0.1
5,985,357	+				+0.6
5,985,358	-				-0.3
5,985,392	+				+1.0
5,985,392	+				-1.3
5,985,392	+				-0.2
5,985,392	+				+0.9
5,985,392	+				+0.4
5,985,392	+				-1.7
5,985,392	+				-0.0
5,985,392	+				+0.4
5,985,392	+				-0.0
5,985,392	+				+2.0
5,985,393	-				-2.0
5,985,393	-				-1.2
5,985,393	-				+0.2
5,985,393	-				+1.1
5,985,393	-				-0.9
5,985,393	-				+0.9
5,985,393	-				+0.1
5,985,393	-				-0.0
5,985,393	-				-0.9
5,985,393	-				-0.8
5,985,550	+		PFLU_RS26805	0.27	+0.8
5,985,550	+		PFLU_RS26805	0.27	+0.2
5,985,550	+		PFLU_RS26805	0.27	-0.2
5,985,551	-		PFLU_RS26805	0.27	+1.0
5,985,551	-		PFLU_RS26805	0.27	+0.1
5,985,620	+		PFLU_RS26805	0.38	+0.3
5,985,620	+		PFLU_RS26805	0.38	-0.3
5,985,620	+		PFLU_RS26805	0.38	-0.2
5,985,620	+		PFLU_RS26805	0.38	-0.7
5,985,620	+		PFLU_RS26805	0.38	+1.2
5,985,621	-		PFLU_RS26805	0.39	+0.3
5,985,621	-		PFLU_RS26805	0.39	-0.2
5,985,621	-		PFLU_RS26805	0.39	-0.4
5,985,621	-		PFLU_RS26805	0.39	-0.0
5,985,621	-		PFLU_RS26805	0.39	+0.4
5,985,694	+		PFLU_RS26805	0.50	+0.3
5,985,694	+		PFLU_RS26805	0.50	-0.3
5,985,695	-		PFLU_RS26805	0.50	+0.0