Experiment: Sucrose (C) and Glycine betaine (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21840 and PFLU_RS21845 are separated by 4 nucleotides PFLU_RS21845 and PFLU_RS21850 are separated by 9 nucleotides PFLU_RS21850 and PFLU_RS21855 are separated by 51 nucleotides
PFLU_RS21840: PFLU_RS21840 - flagellar assembly peptidoglycan hydrolase FlgJ, at 4,918,143 to 4,919,414
_RS21840
PFLU_RS21845: PFLU_RS21845 - flagellar basal body P-ring protein FlgI, at 4,919,419 to 4,920,525
_RS21845
PFLU_RS21850: PFLU_RS21850 - flagellar basal body L-ring protein FlgH, at 4,920,535 to 4,921,230
_RS21850
PFLU_RS21855: PFLU_RS21855 - flagellar basal-body rod protein FlgG, at 4,921,282 to 4,922,067
_RS21855
Position (kb) 4919
4920
4921 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4918.482 kb on - strand, within PFLU_RS21840 at 4918.482 kb on - strand, within PFLU_RS21840 at 4918.482 kb on - strand, within PFLU_RS21840 at 4918.520 kb on + strand, within PFLU_RS21840 at 4918.521 kb on - strand, within PFLU_RS21840 at 4918.558 kb on + strand, within PFLU_RS21840 at 4918.558 kb on + strand, within PFLU_RS21840 at 4918.558 kb on + strand, within PFLU_RS21840 at 4918.558 kb on + strand, within PFLU_RS21840 at 4918.558 kb on + strand, within PFLU_RS21840 at 4918.559 kb on - strand, within PFLU_RS21840 at 4918.559 kb on - strand, within PFLU_RS21840 at 4918.572 kb on - strand, within PFLU_RS21840 at 4918.687 kb on + strand, within PFLU_RS21840 at 4918.688 kb on - strand, within PFLU_RS21840 at 4918.763 kb on + strand, within PFLU_RS21840 at 4918.763 kb on + strand, within PFLU_RS21840 at 4918.763 kb on + strand, within PFLU_RS21840 at 4918.930 kb on + strand, within PFLU_RS21840 at 4919.164 kb on + strand, within PFLU_RS21840 at 4919.164 kb on + strand, within PFLU_RS21840 at 4919.164 kb on + strand, within PFLU_RS21840 at 4919.164 kb on + strand, within PFLU_RS21840 at 4919.165 kb on - strand, within PFLU_RS21840 at 4919.165 kb on - strand, within PFLU_RS21840 at 4919.165 kb on - strand, within PFLU_RS21840 at 4919.165 kb on - strand, within PFLU_RS21840 at 4919.165 kb on - strand, within PFLU_RS21840 at 4919.176 kb on + strand, within PFLU_RS21840 at 4919.176 kb on + strand, within PFLU_RS21840 at 4919.176 kb on + strand, within PFLU_RS21840 at 4919.339 kb on + strand at 4919.339 kb on + strand at 4919.340 kb on - strand at 4919.359 kb on + strand at 4919.359 kb on + strand at 4919.359 kb on + strand at 4919.359 kb on + strand at 4919.359 kb on + strand at 4919.359 kb on + strand at 4919.360 kb on - strand at 4919.360 kb on - strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.385 kb on + strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.386 kb on - strand at 4919.387 kb on + strand at 4919.387 kb on + strand at 4919.387 kb on + strand at 4919.387 kb on + strand at 4919.387 kb on + strand at 4919.387 kb on + strand at 4919.387 kb on + strand at 4919.387 kb on + strand at 4919.388 kb on - strand at 4919.388 kb on - strand at 4919.388 kb on - strand at 4919.388 kb on - strand at 4919.388 kb on - strand at 4919.402 kb on + strand at 4919.402 kb on + strand at 4919.402 kb on + strand at 4919.649 kb on + strand, within PFLU_RS21845 at 4919.650 kb on - strand, within PFLU_RS21845 at 4919.733 kb on + strand, within PFLU_RS21845 at 4919.734 kb on - strand, within PFLU_RS21845 at 4919.810 kb on + strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4919.811 kb on - strand, within PFLU_RS21845 at 4920.022 kb on - strand, within PFLU_RS21845 at 4920.116 kb on + strand, within PFLU_RS21845 at 4920.117 kb on - strand, within PFLU_RS21845 at 4920.117 kb on - strand, within PFLU_RS21845 at 4920.132 kb on + strand, within PFLU_RS21845 at 4920.133 kb on - strand, within PFLU_RS21845 at 4920.133 kb on - strand, within PFLU_RS21845 at 4920.184 kb on - strand, within PFLU_RS21845 at 4920.184 kb on - strand, within PFLU_RS21845 at 4920.201 kb on + strand, within PFLU_RS21845 at 4920.202 kb on - strand, within PFLU_RS21845 at 4920.202 kb on - strand, within PFLU_RS21845 at 4920.301 kb on + strand, within PFLU_RS21845 at 4920.378 kb on + strand, within PFLU_RS21845 at 4920.536 kb on + strand at 4920.536 kb on + strand at 4920.536 kb on + strand at 4920.536 kb on + strand at 4920.536 kb on + strand at 4920.537 kb on - strand at 4920.537 kb on - strand at 4920.537 kb on - strand at 4920.537 kb on - strand at 4920.537 kb on - strand at 4920.537 kb on - strand at 4920.556 kb on - strand at 4920.609 kb on + strand, within PFLU_RS21850 at 4920.617 kb on + strand, within PFLU_RS21850 at 4920.617 kb on + strand, within PFLU_RS21850 at 4920.618 kb on - strand, within PFLU_RS21850 at 4920.618 kb on - strand, within PFLU_RS21850 at 4920.621 kb on + strand, within PFLU_RS21850 at 4920.621 kb on + strand, within PFLU_RS21850 at 4920.621 kb on + strand, within PFLU_RS21850 at 4920.622 kb on - strand, within PFLU_RS21850 at 4920.622 kb on - strand, within PFLU_RS21850 at 4920.657 kb on + strand, within PFLU_RS21850 at 4920.657 kb on + strand, within PFLU_RS21850 at 4920.658 kb on - strand, within PFLU_RS21850 at 4920.658 kb on - strand, within PFLU_RS21850 at 4920.723 kb on + strand, within PFLU_RS21850 at 4920.769 kb on + strand, within PFLU_RS21850 at 4920.770 kb on - strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.772 kb on + strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.773 kb on - strand, within PFLU_RS21850 at 4920.860 kb on + strand, within PFLU_RS21850 at 4920.860 kb on + strand, within PFLU_RS21850 at 4920.861 kb on - strand, within PFLU_RS21850 at 4920.861 kb on - strand, within PFLU_RS21850 at 4921.055 kb on + strand, within PFLU_RS21850 at 4921.056 kb on - strand, within PFLU_RS21850 at 4921.056 kb on - strand, within PFLU_RS21850 at 4921.056 kb on - strand, within PFLU_RS21850 at 4921.082 kb on + strand, within PFLU_RS21850 at 4921.082 kb on + strand, within PFLU_RS21850 at 4921.082 kb on + strand, within PFLU_RS21850 at 4921.082 kb on + strand, within PFLU_RS21850 at 4921.083 kb on - strand, within PFLU_RS21850 at 4921.083 kb on - strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.139 kb on + strand, within PFLU_RS21850 at 4921.140 kb on - strand, within PFLU_RS21850 at 4921.142 kb on + strand, within PFLU_RS21850 at 4921.142 kb on + strand, within PFLU_RS21850 at 4921.142 kb on + strand, within PFLU_RS21850 at 4921.143 kb on - strand, within PFLU_RS21850 at 4921.143 kb on - strand, within PFLU_RS21850 at 4921.143 kb on - strand, within PFLU_RS21850 at 4921.221 kb on - strand at 4921.221 kb on - strand at 4921.221 kb on - strand at 4921.221 kb on - strand at 4921.221 kb on - strand at 4921.221 kb on - strand at 4921.237 kb on + strand at 4921.238 kb on - strand at 4921.238 kb on - strand at 4921.238 kb on - strand at 4921.283 kb on + strand at 4921.283 kb on + strand at 4921.284 kb on - strand at 4921.298 kb on - strand at 4921.349 kb on + strand at 4921.349 kb on + strand at 4921.350 kb on - strand at 4921.350 kb on - strand at 4921.362 kb on + strand, within PFLU_RS21855 at 4921.362 kb on + strand, within PFLU_RS21855 at 4921.504 kb on - strand, within PFLU_RS21855
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) and Glycine betaine (N); with MOPS remove 4,918,482 - PFLU_RS21840 0.27 +0.1 4,918,482 - PFLU_RS21840 0.27 +0.8 4,918,482 - PFLU_RS21840 0.27 +0.7 4,918,520 + PFLU_RS21840 0.30 -0.9 4,918,521 - PFLU_RS21840 0.30 +0.4 4,918,558 + PFLU_RS21840 0.33 +0.3 4,918,558 + PFLU_RS21840 0.33 +1.7 4,918,558 + PFLU_RS21840 0.33 +1.1 4,918,558 + PFLU_RS21840 0.33 -0.1 4,918,558 + PFLU_RS21840 0.33 +0.7 4,918,559 - PFLU_RS21840 0.33 -1.6 4,918,559 - PFLU_RS21840 0.33 +0.9 4,918,572 - PFLU_RS21840 0.34 +0.7 4,918,687 + PFLU_RS21840 0.43 +0.9 4,918,688 - PFLU_RS21840 0.43 +0.7 4,918,763 + PFLU_RS21840 0.49 +0.6 4,918,763 + PFLU_RS21840 0.49 -1.2 4,918,763 + PFLU_RS21840 0.49 -0.4 4,918,930 + PFLU_RS21840 0.62 -0.3 4,919,164 + PFLU_RS21840 0.80 -0.1 4,919,164 + PFLU_RS21840 0.80 +0.5 4,919,164 + PFLU_RS21840 0.80 +1.3 4,919,164 + PFLU_RS21840 0.80 +0.8 4,919,165 - PFLU_RS21840 0.80 +0.4 4,919,165 - PFLU_RS21840 0.80 -0.5 4,919,165 - PFLU_RS21840 0.80 +1.1 4,919,165 - PFLU_RS21840 0.80 -0.7 4,919,165 - PFLU_RS21840 0.80 +0.9 4,919,176 + PFLU_RS21840 0.81 +0.4 4,919,176 + PFLU_RS21840 0.81 +1.0 4,919,176 + PFLU_RS21840 0.81 +0.5 4,919,339 + +0.4 4,919,339 + -0.1 4,919,340 - +0.1 4,919,359 + +0.4 4,919,359 + +0.9 4,919,359 + +0.8 4,919,359 + +0.1 4,919,359 + +0.4 4,919,359 + +0.7 4,919,360 - +0.4 4,919,360 - +1.2 4,919,385 + +0.1 4,919,385 + +0.4 4,919,385 + +1.2 4,919,385 + +0.1 4,919,385 + +0.0 4,919,385 + +0.4 4,919,385 + +0.3 4,919,385 + -0.9 4,919,385 + +0.0 4,919,386 - +1.4 4,919,386 - +0.7 4,919,386 - +0.9 4,919,386 - -1.2 4,919,386 - +0.6 4,919,386 - -0.8 4,919,386 - +0.1 4,919,386 - -0.5 4,919,386 - +0.6 4,919,386 - +0.5 4,919,386 - -0.3 4,919,386 - +1.2 4,919,386 - -0.7 4,919,387 + +0.3 4,919,387 + +0.8 4,919,387 + +0.7 4,919,387 + +0.7 4,919,387 + +0.6 4,919,387 + +1.0 4,919,387 + +0.5 4,919,387 + +0.9 4,919,388 - +0.6 4,919,388 - -0.1 4,919,388 - +0.0 4,919,388 - +0.5 4,919,388 - -0.2 4,919,402 + +1.0 4,919,402 + +0.3 4,919,402 + +1.5 4,919,649 + PFLU_RS21845 0.21 +0.6 4,919,650 - PFLU_RS21845 0.21 +1.0 4,919,733 + PFLU_RS21845 0.28 -0.1 4,919,734 - PFLU_RS21845 0.28 +1.0 4,919,810 + PFLU_RS21845 0.35 +0.2 4,919,811 - PFLU_RS21845 0.35 +0.8 4,919,811 - PFLU_RS21845 0.35 -0.2 4,919,811 - PFLU_RS21845 0.35 +0.3 4,919,811 - PFLU_RS21845 0.35 +0.5 4,919,811 - PFLU_RS21845 0.35 +0.8 4,919,811 - PFLU_RS21845 0.35 +0.9 4,919,811 - PFLU_RS21845 0.35 -0.0 4,919,811 - PFLU_RS21845 0.35 +0.6 4,920,022 - PFLU_RS21845 0.54 +0.1 4,920,116 + PFLU_RS21845 0.63 +0.7 4,920,117 - PFLU_RS21845 0.63 +0.8 4,920,117 - PFLU_RS21845 0.63 +0.2 4,920,132 + PFLU_RS21845 0.64 +0.9 4,920,133 - PFLU_RS21845 0.64 +0.3 4,920,133 - PFLU_RS21845 0.64 -0.7 4,920,184 - PFLU_RS21845 0.69 +1.0 4,920,184 - PFLU_RS21845 0.69 +0.3 4,920,201 + PFLU_RS21845 0.71 +1.3 4,920,202 - PFLU_RS21845 0.71 +1.0 4,920,202 - PFLU_RS21845 0.71 +0.5 4,920,301 + PFLU_RS21845 0.80 -0.2 4,920,378 + PFLU_RS21845 0.87 +1.4 4,920,536 + +0.6 4,920,536 + +0.7 4,920,536 + +0.1 4,920,536 + +1.2 4,920,536 + +1.1 4,920,537 - -0.2 4,920,537 - -0.1 4,920,537 - +0.3 4,920,537 - +1.2 4,920,537 - -0.2 4,920,537 - -0.1 4,920,556 - -0.0 4,920,609 + PFLU_RS21850 0.11 +0.9 4,920,617 + PFLU_RS21850 0.12 +0.1 4,920,617 + PFLU_RS21850 0.12 +1.0 4,920,618 - PFLU_RS21850 0.12 +0.9 4,920,618 - PFLU_RS21850 0.12 +0.0 4,920,621 + PFLU_RS21850 0.12 +0.9 4,920,621 + PFLU_RS21850 0.12 +0.6 4,920,621 + PFLU_RS21850 0.12 +0.6 4,920,622 - PFLU_RS21850 0.12 +1.1 4,920,622 - PFLU_RS21850 0.12 +1.2 4,920,657 + PFLU_RS21850 0.18 +0.4 4,920,657 + PFLU_RS21850 0.18 +0.7 4,920,658 - PFLU_RS21850 0.18 -0.4 4,920,658 - PFLU_RS21850 0.18 +0.3 4,920,723 + PFLU_RS21850 0.27 +1.0 4,920,769 + PFLU_RS21850 0.34 +1.4 4,920,770 - PFLU_RS21850 0.34 +0.5 4,920,772 + PFLU_RS21850 0.34 +1.2 4,920,772 + PFLU_RS21850 0.34 +0.7 4,920,772 + PFLU_RS21850 0.34 +0.2 4,920,772 + PFLU_RS21850 0.34 +0.5 4,920,772 + PFLU_RS21850 0.34 +0.6 4,920,772 + PFLU_RS21850 0.34 -0.6 4,920,772 + PFLU_RS21850 0.34 +0.0 4,920,772 + PFLU_RS21850 0.34 +0.7 4,920,772 + PFLU_RS21850 0.34 -0.1 4,920,772 + PFLU_RS21850 0.34 +0.1 4,920,772 + PFLU_RS21850 0.34 +0.8 4,920,772 + PFLU_RS21850 0.34 +0.2 4,920,772 + PFLU_RS21850 0.34 +0.4 4,920,772 + PFLU_RS21850 0.34 +0.8 4,920,772 + PFLU_RS21850 0.34 -0.1 4,920,772 + PFLU_RS21850 0.34 +0.2 4,920,772 + PFLU_RS21850 0.34 -1.0 4,920,772 + PFLU_RS21850 0.34 +0.4 4,920,772 + PFLU_RS21850 0.34 +1.4 4,920,772 + PFLU_RS21850 0.34 +1.0 4,920,772 + PFLU_RS21850 0.34 +1.0 4,920,772 + PFLU_RS21850 0.34 +0.1 4,920,772 + PFLU_RS21850 0.34 -0.9 4,920,772 + PFLU_RS21850 0.34 +0.8 4,920,772 + PFLU_RS21850 0.34 +0.2 4,920,773 - PFLU_RS21850 0.34 +0.7 4,920,773 - PFLU_RS21850 0.34 +0.9 4,920,773 - PFLU_RS21850 0.34 +0.4 4,920,773 - PFLU_RS21850 0.34 +0.9 4,920,773 - PFLU_RS21850 0.34 +1.0 4,920,773 - PFLU_RS21850 0.34 +1.5 4,920,773 - PFLU_RS21850 0.34 +0.1 4,920,773 - PFLU_RS21850 0.34 +0.5 4,920,773 - PFLU_RS21850 0.34 +0.5 4,920,773 - PFLU_RS21850 0.34 +0.3 4,920,773 - PFLU_RS21850 0.34 +0.4 4,920,773 - PFLU_RS21850 0.34 +0.6 4,920,773 - PFLU_RS21850 0.34 +0.4 4,920,860 + PFLU_RS21850 0.47 -1.7 4,920,860 + PFLU_RS21850 0.47 +1.0 4,920,861 - PFLU_RS21850 0.47 +0.4 4,920,861 - PFLU_RS21850 0.47 +1.2 4,921,055 + PFLU_RS21850 0.75 +1.5 4,921,056 - PFLU_RS21850 0.75 +0.3 4,921,056 - PFLU_RS21850 0.75 +1.1 4,921,056 - PFLU_RS21850 0.75 +0.8 4,921,082 + PFLU_RS21850 0.79 +1.5 4,921,082 + PFLU_RS21850 0.79 +2.2 4,921,082 + PFLU_RS21850 0.79 -0.9 4,921,082 + PFLU_RS21850 0.79 +0.9 4,921,083 - PFLU_RS21850 0.79 +0.1 4,921,083 - PFLU_RS21850 0.79 -0.4 4,921,139 + PFLU_RS21850 0.87 -0.3 4,921,139 + PFLU_RS21850 0.87 +1.0 4,921,139 + PFLU_RS21850 0.87 +0.5 4,921,139 + PFLU_RS21850 0.87 -0.7 4,921,139 + PFLU_RS21850 0.87 +0.0 4,921,139 + PFLU_RS21850 0.87 +1.2 4,921,139 + PFLU_RS21850 0.87 +0.4 4,921,139 + PFLU_RS21850 0.87 +2.7 4,921,140 - PFLU_RS21850 0.87 +0.4 4,921,142 + PFLU_RS21850 0.87 -0.7 4,921,142 + PFLU_RS21850 0.87 +0.6 4,921,142 + PFLU_RS21850 0.87 -1.0 4,921,143 - PFLU_RS21850 0.87 -1.2 4,921,143 - PFLU_RS21850 0.87 +0.6 4,921,143 - PFLU_RS21850 0.87 +1.0 4,921,221 - +1.3 4,921,221 - +0.5 4,921,221 - +0.5 4,921,221 - +0.3 4,921,221 - +0.8 4,921,221 - -1.4 4,921,237 + +1.2 4,921,238 - -1.9 4,921,238 - +0.2 4,921,238 - +1.2 4,921,283 + -0.2 4,921,283 + +0.9 4,921,284 - -0.8 4,921,298 - +0.7 4,921,349 + +1.0 4,921,349 + +0.3 4,921,350 - +0.1 4,921,350 - +0.5 4,921,362 + PFLU_RS21855 0.10 +1.5 4,921,362 + PFLU_RS21855 0.10 +0.8 4,921,504 - PFLU_RS21855 0.28 -0.0
Or see this region's nucleotide sequence