Experiment: Sucrose (C) and Glycine betaine (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS19030 and PFLU_RS19035 are separated by 25 nucleotides PFLU_RS19035 and PFLU_RS19040 are separated by 2 nucleotides PFLU_RS19040 and PFLU_RS19045 are separated by 18 nucleotides PFLU_RS19045 and PFLU_RS19050 overlap by 7 nucleotides
PFLU_RS19030: PFLU_RS19030 - molecular chaperone, at 4,305,057 to 4,305,845
_RS19030
PFLU_RS19035: PFLU_RS19035 - spore coat protein U domain-containing protein, at 4,305,871 to 4,306,359
_RS19035
PFLU_RS19040: PFLU_RS19040 - spore coat protein U domain-containing protein, at 4,306,362 to 4,306,904
_RS19040
PFLU_RS19045: PFLU_RS19045 - spore coat protein U domain-containing protein, at 4,306,923 to 4,307,465
_RS19045
PFLU_RS19050: PFLU_RS19050 - spore coat protein U domain-containing protein, at 4,307,459 to 4,307,983
_RS19050
Position (kb) 4306
4307 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4305.407 kb on - strand, within PFLU_RS19030 at 4305.550 kb on - strand, within PFLU_RS19030 at 4305.550 kb on - strand, within PFLU_RS19030 at 4305.620 kb on - strand, within PFLU_RS19030 at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.858 kb on + strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.859 kb on - strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.860 kb on + strand at 4305.861 kb on - strand at 4305.861 kb on - strand at 4305.861 kb on - strand at 4305.861 kb on - strand at 4305.861 kb on - strand at 4305.861 kb on - strand at 4305.866 kb on + strand at 4305.866 kb on + strand at 4305.867 kb on - strand at 4305.873 kb on - strand at 4305.873 kb on - strand at 4305.873 kb on - strand at 4305.873 kb on - strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.886 kb on + strand at 4305.887 kb on - strand at 4305.887 kb on - strand at 4305.887 kb on - strand at 4305.887 kb on - strand at 4305.887 kb on - strand at 4305.905 kb on + strand at 4305.905 kb on + strand at 4305.905 kb on + strand at 4305.905 kb on + strand at 4305.905 kb on + strand at 4305.906 kb on - strand at 4305.906 kb on - strand at 4305.906 kb on - strand at 4305.906 kb on - strand at 4305.906 kb on - strand at 4305.947 kb on + strand, within PFLU_RS19035 at 4305.947 kb on + strand, within PFLU_RS19035 at 4305.947 kb on + strand, within PFLU_RS19035 at 4305.948 kb on - strand, within PFLU_RS19035 at 4305.948 kb on - strand, within PFLU_RS19035 at 4305.948 kb on - strand, within PFLU_RS19035 at 4305.948 kb on - strand, within PFLU_RS19035 at 4305.948 kb on - strand, within PFLU_RS19035 at 4305.980 kb on + strand, within PFLU_RS19035 at 4305.980 kb on + strand, within PFLU_RS19035 at 4305.980 kb on + strand, within PFLU_RS19035 at 4305.980 kb on + strand, within PFLU_RS19035 at 4305.981 kb on - strand, within PFLU_RS19035 at 4305.981 kb on - strand, within PFLU_RS19035 at 4305.981 kb on - strand, within PFLU_RS19035 at 4306.039 kb on + strand, within PFLU_RS19035 at 4306.039 kb on + strand, within PFLU_RS19035 at 4306.046 kb on + strand, within PFLU_RS19035 at 4306.046 kb on + strand, within PFLU_RS19035 at 4306.047 kb on - strand, within PFLU_RS19035 at 4306.214 kb on + strand, within PFLU_RS19035 at 4306.214 kb on + strand, within PFLU_RS19035 at 4306.214 kb on + strand, within PFLU_RS19035 at 4306.215 kb on - strand, within PFLU_RS19035 at 4306.215 kb on - strand, within PFLU_RS19035 at 4306.215 kb on - strand, within PFLU_RS19035 at 4306.363 kb on + strand at 4306.363 kb on + strand at 4306.363 kb on + strand at 4306.363 kb on + strand at 4306.364 kb on - strand at 4306.364 kb on - strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.396 kb on + strand at 4306.397 kb on - strand at 4306.397 kb on - strand at 4306.397 kb on - strand at 4306.397 kb on - strand at 4306.397 kb on - strand at 4306.397 kb on - strand at 4306.439 kb on - strand, within PFLU_RS19040 at 4306.528 kb on + strand, within PFLU_RS19040 at 4306.528 kb on + strand, within PFLU_RS19040 at 4306.528 kb on + strand, within PFLU_RS19040 at 4306.528 kb on + strand, within PFLU_RS19040 at 4306.528 kb on + strand, within PFLU_RS19040 at 4306.529 kb on - strand, within PFLU_RS19040 at 4306.529 kb on - strand, within PFLU_RS19040 at 4306.537 kb on + strand, within PFLU_RS19040 at 4306.538 kb on - strand, within PFLU_RS19040 at 4306.538 kb on - strand, within PFLU_RS19040 at 4306.739 kb on + strand, within PFLU_RS19040 at 4306.797 kb on + strand, within PFLU_RS19040 at 4306.797 kb on + strand, within PFLU_RS19040 at 4306.798 kb on - strand, within PFLU_RS19040 at 4306.798 kb on - strand, within PFLU_RS19040 at 4306.798 kb on - strand, within PFLU_RS19040 at 4306.798 kb on - strand, within PFLU_RS19040 at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.896 kb on + strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.897 kb on - strand at 4306.924 kb on + strand at 4306.924 kb on + strand at 4306.925 kb on - strand at 4306.957 kb on + strand at 4306.957 kb on + strand at 4306.957 kb on + strand at 4306.957 kb on + strand at 4306.957 kb on + strand at 4306.957 kb on + strand at 4306.958 kb on - strand at 4306.958 kb on - strand at 4306.958 kb on - strand at 4306.982 kb on + strand, within PFLU_RS19045 at 4306.983 kb on - strand, within PFLU_RS19045 at 4306.983 kb on - strand, within PFLU_RS19045 at 4307.016 kb on + strand, within PFLU_RS19045 at 4307.065 kb on + strand, within PFLU_RS19045 at 4307.065 kb on + strand, within PFLU_RS19045 at 4307.065 kb on + strand, within PFLU_RS19045 at 4307.065 kb on + strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.066 kb on - strand, within PFLU_RS19045 at 4307.460 kb on + strand at 4307.460 kb on + strand at 4307.460 kb on + strand at 4307.460 kb on + strand at 4307.460 kb on + strand at 4307.460 kb on + strand at 4307.461 kb on - strand at 4307.461 kb on - strand at 4307.461 kb on - strand at 4307.461 kb on - strand at 4307.461 kb on - strand at 4307.461 kb on - strand at 4307.494 kb on - strand at 4307.494 kb on - strand at 4307.628 kb on + strand, within PFLU_RS19050 at 4307.628 kb on + strand, within PFLU_RS19050 at 4307.628 kb on + strand, within PFLU_RS19050 at 4307.628 kb on + strand, within PFLU_RS19050 at 4307.629 kb on - strand, within PFLU_RS19050 at 4307.629 kb on - strand, within PFLU_RS19050 at 4307.673 kb on + strand, within PFLU_RS19050 at 4307.673 kb on + strand, within PFLU_RS19050 at 4307.674 kb on - strand, within PFLU_RS19050 at 4307.674 kb on - strand, within PFLU_RS19050
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) and Glycine betaine (N); with MOPS remove 4,305,407 - PFLU_RS19030 0.44 +0.1 4,305,550 - PFLU_RS19030 0.62 +1.3 4,305,550 - PFLU_RS19030 0.62 +0.6 4,305,620 - PFLU_RS19030 0.71 -0.3 4,305,858 + -0.0 4,305,858 + +0.3 4,305,858 + -0.8 4,305,858 + -0.0 4,305,858 + -1.2 4,305,858 + +0.6 4,305,858 + -1.9 4,305,858 + -0.5 4,305,858 + +0.6 4,305,859 - +0.6 4,305,859 - +1.1 4,305,859 - -0.1 4,305,859 - +0.2 4,305,859 - -0.0 4,305,859 - -1.1 4,305,859 - -1.1 4,305,859 - -0.5 4,305,859 - -0.0 4,305,860 + +0.5 4,305,860 + +0.1 4,305,860 + +0.3 4,305,860 + -0.2 4,305,860 + -0.1 4,305,860 + -2.2 4,305,860 + +0.3 4,305,860 + +1.5 4,305,860 + -0.4 4,305,860 + -0.6 4,305,860 + +0.0 4,305,861 - -0.4 4,305,861 - -1.6 4,305,861 - -0.4 4,305,861 - -0.5 4,305,861 - -1.1 4,305,861 - -1.0 4,305,866 + -0.2 4,305,866 + +0.3 4,305,867 - -0.1 4,305,873 - -0.0 4,305,873 - -1.9 4,305,873 - +0.4 4,305,873 - -1.0 4,305,886 + -0.8 4,305,886 + +1.1 4,305,886 + +0.2 4,305,886 + +0.0 4,305,886 + +0.3 4,305,886 + -1.9 4,305,886 + -1.5 4,305,886 + +0.9 4,305,886 + -2.2 4,305,887 - +1.2 4,305,887 - +0.0 4,305,887 - +1.4 4,305,887 - +0.3 4,305,887 - +0.9 4,305,905 + +0.7 4,305,905 + +0.4 4,305,905 + +0.1 4,305,905 + +1.5 4,305,905 + +0.8 4,305,906 - -0.6 4,305,906 - -0.7 4,305,906 - +0.6 4,305,906 - +0.4 4,305,906 - +0.2 4,305,947 + PFLU_RS19035 0.16 -1.5 4,305,947 + PFLU_RS19035 0.16 -0.1 4,305,947 + PFLU_RS19035 0.16 -2.3 4,305,948 - PFLU_RS19035 0.16 +0.5 4,305,948 - PFLU_RS19035 0.16 +1.0 4,305,948 - PFLU_RS19035 0.16 -0.4 4,305,948 - PFLU_RS19035 0.16 +0.9 4,305,948 - PFLU_RS19035 0.16 -0.4 4,305,980 + PFLU_RS19035 0.22 +0.1 4,305,980 + PFLU_RS19035 0.22 -1.9 4,305,980 + PFLU_RS19035 0.22 -0.5 4,305,980 + PFLU_RS19035 0.22 +0.1 4,305,981 - PFLU_RS19035 0.22 -0.1 4,305,981 - PFLU_RS19035 0.22 +0.8 4,305,981 - PFLU_RS19035 0.22 -1.8 4,306,039 + PFLU_RS19035 0.34 +0.8 4,306,039 + PFLU_RS19035 0.34 -0.9 4,306,046 + PFLU_RS19035 0.36 +0.5 4,306,046 + PFLU_RS19035 0.36 +0.3 4,306,047 - PFLU_RS19035 0.36 -1.8 4,306,214 + PFLU_RS19035 0.70 -0.8 4,306,214 + PFLU_RS19035 0.70 +0.1 4,306,214 + PFLU_RS19035 0.70 -1.0 4,306,215 - PFLU_RS19035 0.70 -2.1 4,306,215 - PFLU_RS19035 0.70 +0.1 4,306,215 - PFLU_RS19035 0.70 -0.3 4,306,363 + -1.6 4,306,363 + +1.5 4,306,363 + -0.4 4,306,363 + +0.4 4,306,364 - +0.7 4,306,364 - +1.3 4,306,396 + +0.8 4,306,396 + -0.2 4,306,396 + +1.7 4,306,396 + -0.9 4,306,396 + +0.1 4,306,396 + -0.2 4,306,396 + +0.6 4,306,396 + +0.1 4,306,396 + +0.8 4,306,396 + +0.7 4,306,397 - +1.1 4,306,397 - -0.1 4,306,397 - +0.3 4,306,397 - -0.5 4,306,397 - -0.5 4,306,397 - +1.2 4,306,439 - PFLU_RS19040 0.14 +0.5 4,306,528 + PFLU_RS19040 0.31 +0.8 4,306,528 + PFLU_RS19040 0.31 +0.2 4,306,528 + PFLU_RS19040 0.31 +1.0 4,306,528 + PFLU_RS19040 0.31 -0.2 4,306,528 + PFLU_RS19040 0.31 +0.5 4,306,529 - PFLU_RS19040 0.31 +1.8 4,306,529 - PFLU_RS19040 0.31 -0.5 4,306,537 + PFLU_RS19040 0.32 -0.3 4,306,538 - PFLU_RS19040 0.32 +0.1 4,306,538 - PFLU_RS19040 0.32 -2.2 4,306,739 + PFLU_RS19040 0.69 +0.6 4,306,797 + PFLU_RS19040 0.80 +1.2 4,306,797 + PFLU_RS19040 0.80 -0.3 4,306,798 - PFLU_RS19040 0.80 -0.8 4,306,798 - PFLU_RS19040 0.80 +1.4 4,306,798 - PFLU_RS19040 0.80 -0.3 4,306,798 - PFLU_RS19040 0.80 -0.2 4,306,896 + +0.1 4,306,896 + +0.4 4,306,896 + -0.6 4,306,896 + +0.6 4,306,896 + -0.5 4,306,896 + +0.8 4,306,896 + -0.8 4,306,896 + +0.3 4,306,896 + -0.8 4,306,896 + +0.8 4,306,896 + +1.2 4,306,896 + +0.4 4,306,896 + +0.4 4,306,896 + +0.2 4,306,896 + -0.2 4,306,896 + +0.5 4,306,896 + +0.3 4,306,897 - +0.2 4,306,897 - +0.7 4,306,897 - +0.2 4,306,897 - -0.1 4,306,897 - +1.3 4,306,897 - +1.0 4,306,897 - +0.7 4,306,897 - -1.0 4,306,897 - +1.2 4,306,897 - +0.9 4,306,897 - +0.6 4,306,897 - +1.2 4,306,897 - -0.5 4,306,897 - -1.0 4,306,897 - +1.0 4,306,924 + -2.7 4,306,924 + +0.7 4,306,925 - +0.4 4,306,957 + +0.1 4,306,957 + +0.0 4,306,957 + +1.1 4,306,957 + +0.3 4,306,957 + -1.0 4,306,957 + +0.0 4,306,958 - -0.2 4,306,958 - -0.3 4,306,958 - +0.4 4,306,982 + PFLU_RS19045 0.11 -0.6 4,306,983 - PFLU_RS19045 0.11 +0.1 4,306,983 - PFLU_RS19045 0.11 -1.0 4,307,016 + PFLU_RS19045 0.17 -0.2 4,307,065 + PFLU_RS19045 0.26 -0.1 4,307,065 + PFLU_RS19045 0.26 -0.2 4,307,065 + PFLU_RS19045 0.26 -0.9 4,307,065 + PFLU_RS19045 0.26 +0.5 4,307,066 - PFLU_RS19045 0.26 +0.1 4,307,066 - PFLU_RS19045 0.26 -0.1 4,307,066 - PFLU_RS19045 0.26 +0.5 4,307,066 - PFLU_RS19045 0.26 -0.2 4,307,066 - PFLU_RS19045 0.26 -0.7 4,307,066 - PFLU_RS19045 0.26 -0.5 4,307,066 - PFLU_RS19045 0.26 -0.6 4,307,066 - PFLU_RS19045 0.26 -0.5 4,307,066 - PFLU_RS19045 0.26 -2.7 4,307,066 - PFLU_RS19045 0.26 -0.9 4,307,460 + +0.9 4,307,460 + +0.0 4,307,460 + +0.6 4,307,460 + +0.5 4,307,460 + +0.1 4,307,460 + +0.5 4,307,461 - -0.2 4,307,461 - +0.2 4,307,461 - +0.4 4,307,461 - +0.6 4,307,461 - +0.4 4,307,461 - +1.0 4,307,494 - +0.5 4,307,494 - +0.4 4,307,628 + PFLU_RS19050 0.32 +0.5 4,307,628 + PFLU_RS19050 0.32 -0.2 4,307,628 + PFLU_RS19050 0.32 -0.5 4,307,628 + PFLU_RS19050 0.32 +1.0 4,307,629 - PFLU_RS19050 0.32 -0.3 4,307,629 - PFLU_RS19050 0.32 +0.9 4,307,673 + PFLU_RS19050 0.41 +0.6 4,307,673 + PFLU_RS19050 0.41 +0.4 4,307,674 - PFLU_RS19050 0.41 +0.3 4,307,674 - PFLU_RS19050 0.41 -0.1
Or see this region's nucleotide sequence