Experiment: Sucrose (C) and Glycine betaine (N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18695 and PFLU_RS18700 are separated by 120 nucleotides PFLU_RS18700 and PFLU_RS18705 are separated by 81 nucleotides PFLU_RS18705 and PFLU_RS18710 are separated by 324 nucleotides PFLU_RS18710 and PFLU_RS18715 are separated by 60 nucleotides
PFLU_RS18695: PFLU_RS18695 - arylamine N-acetyltransferase, at 4,230,534 to 4,231,361
_RS18695
PFLU_RS18700: PFLU_RS18700 - hypothetical protein, at 4,231,482 to 4,231,718
_RS18700
PFLU_RS18705: PFLU_RS18705 - hypothetical protein, at 4,231,800 to 4,232,000
_RS18705
PFLU_RS18710: PFLU_RS18710 - DUF3087 domain-containing protein, at 4,232,325 to 4,232,846
_RS18710
PFLU_RS18715: PFLU_RS18715 - MFS transporter, at 4,232,907 to 4,234,037
_RS18715
Position (kb) 4231
4232
4233 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4230.816 kb on + strand, within PFLU_RS18695 at 4230.816 kb on + strand, within PFLU_RS18695 at 4230.816 kb on + strand, within PFLU_RS18695 at 4230.816 kb on + strand, within PFLU_RS18695 at 4230.816 kb on + strand, within PFLU_RS18695 at 4230.817 kb on - strand, within PFLU_RS18695 at 4230.817 kb on - strand, within PFLU_RS18695 at 4230.817 kb on - strand, within PFLU_RS18695 at 4230.817 kb on - strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.835 kb on + strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.836 kb on - strand, within PFLU_RS18695 at 4230.877 kb on + strand, within PFLU_RS18695 at 4230.877 kb on + strand, within PFLU_RS18695 at 4230.877 kb on + strand, within PFLU_RS18695 at 4230.995 kb on + strand, within PFLU_RS18695 at 4230.995 kb on + strand, within PFLU_RS18695 at 4230.996 kb on - strand, within PFLU_RS18695 at 4230.996 kb on - strand, within PFLU_RS18695 at 4230.996 kb on - strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.997 kb on + strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4230.998 kb on - strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.147 kb on + strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.148 kb on - strand, within PFLU_RS18695 at 4231.333 kb on + strand at 4231.333 kb on + strand at 4231.333 kb on + strand at 4231.333 kb on + strand at 4231.334 kb on - strand at 4231.334 kb on - strand at 4231.334 kb on - strand at 4231.343 kb on + strand at 4231.344 kb on - strand at 4231.396 kb on + strand at 4231.396 kb on + strand at 4231.396 kb on + strand at 4231.397 kb on - strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.460 kb on + strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.461 kb on - strand at 4231.462 kb on + strand at 4231.462 kb on + strand at 4231.462 kb on + strand at 4231.462 kb on + strand at 4231.463 kb on - strand at 4231.463 kb on - strand at 4231.463 kb on - strand at 4231.487 kb on + strand at 4231.500 kb on + strand at 4231.500 kb on + strand at 4231.501 kb on - strand at 4231.688 kb on + strand, within PFLU_RS18700 at 4231.689 kb on - strand, within PFLU_RS18700 at 4231.689 kb on - strand, within PFLU_RS18700 at 4231.689 kb on - strand, within PFLU_RS18700 at 4231.716 kb on + strand at 4231.716 kb on + strand at 4231.716 kb on + strand at 4231.716 kb on + strand at 4231.801 kb on + strand at 4231.801 kb on + strand at 4231.828 kb on + strand, within PFLU_RS18705 at 4231.828 kb on + strand, within PFLU_RS18705 at 4231.829 kb on - strand, within PFLU_RS18705 at 4231.829 kb on - strand, within PFLU_RS18705 at 4231.829 kb on - strand, within PFLU_RS18705 at 4231.829 kb on - strand, within PFLU_RS18705 at 4231.829 kb on - strand, within PFLU_RS18705 at 4232.012 kb on + strand at 4232.012 kb on + strand at 4232.012 kb on + strand at 4232.012 kb on + strand at 4232.012 kb on + strand at 4232.013 kb on - strand at 4232.013 kb on - strand at 4232.013 kb on - strand at 4232.013 kb on - strand at 4232.013 kb on - strand at 4232.013 kb on - strand at 4232.013 kb on - strand at 4232.014 kb on + strand at 4232.014 kb on + strand at 4232.014 kb on + strand at 4232.014 kb on + strand at 4232.014 kb on + strand at 4232.014 kb on + strand at 4232.015 kb on - strand at 4232.015 kb on - strand at 4232.015 kb on - strand at 4232.015 kb on - strand at 4232.015 kb on - strand at 4232.015 kb on - strand at 4232.015 kb on - strand at 4232.037 kb on - strand at 4232.080 kb on + strand at 4232.080 kb on + strand at 4232.081 kb on - strand at 4232.089 kb on + strand at 4232.089 kb on + strand at 4232.089 kb on + strand at 4232.090 kb on - strand at 4232.090 kb on - strand at 4232.090 kb on - strand at 4232.090 kb on - strand at 4232.090 kb on - strand at 4232.201 kb on + strand at 4232.201 kb on + strand at 4232.201 kb on + strand at 4232.202 kb on - strand at 4232.202 kb on - strand at 4232.202 kb on - strand at 4232.202 kb on - strand at 4232.202 kb on - strand at 4232.233 kb on + strand at 4232.233 kb on + strand at 4232.233 kb on + strand at 4232.233 kb on + strand at 4232.234 kb on - strand at 4232.234 kb on - strand at 4232.243 kb on + strand at 4232.315 kb on + strand at 4232.315 kb on + strand at 4232.315 kb on + strand at 4232.315 kb on + strand at 4232.315 kb on + strand at 4232.316 kb on - strand at 4232.473 kb on + strand, within PFLU_RS18710 at 4232.473 kb on + strand, within PFLU_RS18710 at 4232.474 kb on - strand, within PFLU_RS18710 at 4232.474 kb on - strand, within PFLU_RS18710 at 4232.571 kb on + strand, within PFLU_RS18710 at 4232.571 kb on + strand, within PFLU_RS18710 at 4232.571 kb on + strand, within PFLU_RS18710 at 4232.571 kb on + strand, within PFLU_RS18710 at 4232.571 kb on + strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.572 kb on - strand, within PFLU_RS18710 at 4232.679 kb on + strand, within PFLU_RS18710 at 4232.680 kb on - strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.762 kb on + strand, within PFLU_RS18710 at 4232.763 kb on - strand, within PFLU_RS18710 at 4232.763 kb on - strand, within PFLU_RS18710 at 4232.763 kb on - strand, within PFLU_RS18710 at 4232.763 kb on - strand, within PFLU_RS18710 at 4232.845 kb on - strand at 4232.867 kb on + strand at 4232.868 kb on - strand at 4232.877 kb on + strand at 4232.877 kb on + strand at 4232.877 kb on + strand at 4232.877 kb on + strand at 4232.878 kb on - strand at 4232.878 kb on - strand at 4232.878 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) and Glycine betaine (N); with MOPS remove 4,230,816 + PFLU_RS18695 0.34 -1.0 4,230,816 + PFLU_RS18695 0.34 +0.2 4,230,816 + PFLU_RS18695 0.34 -0.7 4,230,816 + PFLU_RS18695 0.34 -1.0 4,230,816 + PFLU_RS18695 0.34 -0.2 4,230,817 - PFLU_RS18695 0.34 -0.1 4,230,817 - PFLU_RS18695 0.34 +1.4 4,230,817 - PFLU_RS18695 0.34 -0.4 4,230,817 - PFLU_RS18695 0.34 +0.4 4,230,835 + PFLU_RS18695 0.36 +0.3 4,230,835 + PFLU_RS18695 0.36 -0.6 4,230,835 + PFLU_RS18695 0.36 +0.1 4,230,835 + PFLU_RS18695 0.36 +0.6 4,230,835 + PFLU_RS18695 0.36 -1.2 4,230,835 + PFLU_RS18695 0.36 -0.4 4,230,835 + PFLU_RS18695 0.36 +0.1 4,230,835 + PFLU_RS18695 0.36 -0.6 4,230,836 - PFLU_RS18695 0.36 +1.0 4,230,836 - PFLU_RS18695 0.36 +0.6 4,230,836 - PFLU_RS18695 0.36 +0.4 4,230,836 - PFLU_RS18695 0.36 -0.3 4,230,836 - PFLU_RS18695 0.36 -1.6 4,230,836 - PFLU_RS18695 0.36 +0.6 4,230,836 - PFLU_RS18695 0.36 -0.2 4,230,836 - PFLU_RS18695 0.36 +0.5 4,230,836 - PFLU_RS18695 0.36 -0.1 4,230,836 - PFLU_RS18695 0.36 +0.6 4,230,836 - PFLU_RS18695 0.36 -0.4 4,230,836 - PFLU_RS18695 0.36 -0.2 4,230,836 - PFLU_RS18695 0.36 -0.3 4,230,877 + PFLU_RS18695 0.41 +0.9 4,230,877 + PFLU_RS18695 0.41 +0.2 4,230,877 + PFLU_RS18695 0.41 +1.1 4,230,995 + PFLU_RS18695 0.56 +1.0 4,230,995 + PFLU_RS18695 0.56 -0.1 4,230,996 - PFLU_RS18695 0.56 +0.7 4,230,996 - PFLU_RS18695 0.56 -2.2 4,230,996 - PFLU_RS18695 0.56 +0.4 4,230,997 + PFLU_RS18695 0.56 -1.1 4,230,997 + PFLU_RS18695 0.56 -0.5 4,230,997 + PFLU_RS18695 0.56 -0.1 4,230,997 + PFLU_RS18695 0.56 +0.2 4,230,997 + PFLU_RS18695 0.56 +1.3 4,230,997 + PFLU_RS18695 0.56 +1.3 4,230,997 + PFLU_RS18695 0.56 +0.8 4,230,997 + PFLU_RS18695 0.56 -1.0 4,230,997 + PFLU_RS18695 0.56 -1.0 4,230,997 + PFLU_RS18695 0.56 -0.1 4,230,998 - PFLU_RS18695 0.56 -0.4 4,230,998 - PFLU_RS18695 0.56 +0.1 4,230,998 - PFLU_RS18695 0.56 -0.3 4,230,998 - PFLU_RS18695 0.56 +0.4 4,230,998 - PFLU_RS18695 0.56 -0.5 4,230,998 - PFLU_RS18695 0.56 +0.7 4,230,998 - PFLU_RS18695 0.56 -1.0 4,230,998 - PFLU_RS18695 0.56 +0.7 4,230,998 - PFLU_RS18695 0.56 -0.6 4,230,998 - PFLU_RS18695 0.56 +0.1 4,230,998 - PFLU_RS18695 0.56 -0.2 4,231,147 + PFLU_RS18695 0.74 +0.0 4,231,147 + PFLU_RS18695 0.74 -1.7 4,231,147 + PFLU_RS18695 0.74 -0.1 4,231,147 + PFLU_RS18695 0.74 -0.3 4,231,147 + PFLU_RS18695 0.74 -0.5 4,231,147 + PFLU_RS18695 0.74 +0.2 4,231,147 + PFLU_RS18695 0.74 -0.8 4,231,147 + PFLU_RS18695 0.74 -0.5 4,231,147 + PFLU_RS18695 0.74 -0.3 4,231,147 + PFLU_RS18695 0.74 -0.5 4,231,147 + PFLU_RS18695 0.74 -0.7 4,231,147 + PFLU_RS18695 0.74 -0.0 4,231,148 - PFLU_RS18695 0.74 -1.1 4,231,148 - PFLU_RS18695 0.74 +0.1 4,231,148 - PFLU_RS18695 0.74 +0.4 4,231,148 - PFLU_RS18695 0.74 +0.8 4,231,148 - PFLU_RS18695 0.74 +0.7 4,231,148 - PFLU_RS18695 0.74 +0.2 4,231,148 - PFLU_RS18695 0.74 +0.6 4,231,148 - PFLU_RS18695 0.74 +0.1 4,231,333 + -0.1 4,231,333 + +0.2 4,231,333 + -0.1 4,231,333 + -0.1 4,231,334 - -0.0 4,231,334 - +0.6 4,231,334 - +0.4 4,231,343 + -0.1 4,231,344 - +0.5 4,231,396 + -0.4 4,231,396 + +0.3 4,231,396 + +0.6 4,231,397 - +0.9 4,231,460 + +0.1 4,231,460 + -1.9 4,231,460 + +0.1 4,231,460 + +0.4 4,231,460 + +0.1 4,231,460 + -0.3 4,231,460 + -0.1 4,231,460 + +0.1 4,231,460 + +1.5 4,231,460 + -0.3 4,231,460 + +0.1 4,231,460 + +0.3 4,231,460 + -1.4 4,231,460 + -0.0 4,231,460 + -0.3 4,231,460 + -0.2 4,231,460 + +0.1 4,231,461 - -0.3 4,231,461 - +0.1 4,231,461 - +0.7 4,231,461 - +0.7 4,231,461 - +0.6 4,231,461 - +0.2 4,231,461 - +1.7 4,231,461 - +0.8 4,231,461 - -0.1 4,231,461 - +0.2 4,231,461 - -0.1 4,231,461 - +1.7 4,231,462 + +1.0 4,231,462 + -0.6 4,231,462 + +1.0 4,231,462 + -0.3 4,231,463 - +1.2 4,231,463 - +0.7 4,231,463 - +1.0 4,231,487 + +0.7 4,231,500 + +0.1 4,231,500 + -1.3 4,231,501 - -0.2 4,231,688 + PFLU_RS18700 0.87 -0.7 4,231,689 - PFLU_RS18700 0.87 -0.1 4,231,689 - PFLU_RS18700 0.87 +0.2 4,231,689 - PFLU_RS18700 0.87 -1.5 4,231,716 + +1.6 4,231,716 + +1.0 4,231,716 + +0.7 4,231,716 + +0.6 4,231,801 + +0.4 4,231,801 + +0.3 4,231,828 + PFLU_RS18705 0.14 +0.6 4,231,828 + PFLU_RS18705 0.14 -0.1 4,231,829 - PFLU_RS18705 0.14 +1.1 4,231,829 - PFLU_RS18705 0.14 +0.6 4,231,829 - PFLU_RS18705 0.14 -0.2 4,231,829 - PFLU_RS18705 0.14 -1.1 4,231,829 - PFLU_RS18705 0.14 +1.0 4,232,012 + +0.8 4,232,012 + +1.2 4,232,012 + -0.7 4,232,012 + +0.2 4,232,012 + +0.6 4,232,013 - -0.2 4,232,013 - +0.2 4,232,013 - +0.4 4,232,013 - -1.1 4,232,013 - +0.4 4,232,013 - -0.1 4,232,013 - +0.1 4,232,014 + -0.4 4,232,014 + +0.5 4,232,014 + +0.7 4,232,014 + -0.4 4,232,014 + +1.3 4,232,014 + +0.2 4,232,015 - +0.7 4,232,015 - -1.7 4,232,015 - -0.7 4,232,015 - -0.8 4,232,015 - +0.7 4,232,015 - +0.2 4,232,015 - -1.3 4,232,037 - +0.6 4,232,080 + -1.0 4,232,080 + -0.6 4,232,081 - -0.2 4,232,089 + +0.7 4,232,089 + +0.3 4,232,089 + +0.1 4,232,090 - -0.2 4,232,090 - +0.4 4,232,090 - +0.8 4,232,090 - +0.2 4,232,090 - -1.3 4,232,201 + +0.9 4,232,201 + +0.0 4,232,201 + -0.8 4,232,202 - -1.1 4,232,202 - +0.3 4,232,202 - +1.3 4,232,202 - +0.6 4,232,202 - -0.3 4,232,233 + -0.5 4,232,233 + -0.1 4,232,233 + +0.6 4,232,233 + +0.9 4,232,234 - +0.3 4,232,234 - +1.0 4,232,243 + +0.4 4,232,315 + -0.4 4,232,315 + -0.7 4,232,315 + -0.0 4,232,315 + -0.9 4,232,315 + +1.8 4,232,316 - +0.4 4,232,473 + PFLU_RS18710 0.28 +0.4 4,232,473 + PFLU_RS18710 0.28 +0.2 4,232,474 - PFLU_RS18710 0.29 +0.6 4,232,474 - PFLU_RS18710 0.29 -0.7 4,232,571 + PFLU_RS18710 0.47 -0.2 4,232,571 + PFLU_RS18710 0.47 -1.1 4,232,571 + PFLU_RS18710 0.47 +0.3 4,232,571 + PFLU_RS18710 0.47 -1.4 4,232,571 + PFLU_RS18710 0.47 +0.8 4,232,572 - PFLU_RS18710 0.47 +0.7 4,232,572 - PFLU_RS18710 0.47 +0.3 4,232,572 - PFLU_RS18710 0.47 -0.0 4,232,572 - PFLU_RS18710 0.47 +0.7 4,232,572 - PFLU_RS18710 0.47 -0.4 4,232,572 - PFLU_RS18710 0.47 +0.2 4,232,572 - PFLU_RS18710 0.47 +0.7 4,232,572 - PFLU_RS18710 0.47 +0.9 4,232,679 + PFLU_RS18710 0.68 -1.5 4,232,680 - PFLU_RS18710 0.68 +0.6 4,232,762 + PFLU_RS18710 0.84 -0.5 4,232,762 + PFLU_RS18710 0.84 +0.1 4,232,762 + PFLU_RS18710 0.84 -0.5 4,232,762 + PFLU_RS18710 0.84 -0.5 4,232,762 + PFLU_RS18710 0.84 -1.1 4,232,762 + PFLU_RS18710 0.84 +0.3 4,232,762 + PFLU_RS18710 0.84 +1.7 4,232,762 + PFLU_RS18710 0.84 -0.2 4,232,763 - PFLU_RS18710 0.84 -0.1 4,232,763 - PFLU_RS18710 0.84 -1.2 4,232,763 - PFLU_RS18710 0.84 +0.3 4,232,763 - PFLU_RS18710 0.84 +0.9 4,232,845 - -0.8 4,232,867 + +0.9 4,232,868 - -0.3 4,232,877 + -0.1 4,232,877 + -0.9 4,232,877 + +0.7 4,232,877 + -0.5 4,232,878 - +0.7 4,232,878 - -0.1 4,232,878 - +0.3
Or see this region's nucleotide sequence