Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15515

Experiment: Sucrose (C) and Glycine betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with MOPS
3,472,330	-		PFLU_RS15510	0.11	-0.9
3,472,377	+		PFLU_RS15510	0.16	+0.5
3,472,479	+		PFLU_RS15510	0.26	+0.5
3,472,479	+		PFLU_RS15510	0.26	-1.3
3,472,479	+		PFLU_RS15510	0.26	+0.1
3,472,479	+		PFLU_RS15510	0.26	-0.2
3,472,479	+		PFLU_RS15510	0.26	+0.8
3,472,479	+		PFLU_RS15510	0.26	+0.8
3,472,480	-		PFLU_RS15510	0.26	+0.0
3,472,480	-		PFLU_RS15510	0.26	-0.4
3,472,480	-		PFLU_RS15510	0.26	-0.0
3,472,480	-		PFLU_RS15510	0.26	+0.9
3,472,480	-		PFLU_RS15510	0.26	-0.4
3,472,480	-		PFLU_RS15510	0.26	+0.4
3,472,480	-		PFLU_RS15510	0.26	+0.3
3,472,512	+		PFLU_RS15510	0.29	+0.2
3,472,512	+		PFLU_RS15510	0.29	-0.3
3,472,512	+		PFLU_RS15510	0.29	-0.1
3,472,512	+		PFLU_RS15510	0.29	-0.4
3,472,512	+		PFLU_RS15510	0.29	-0.7
3,472,512	+		PFLU_RS15510	0.29	-1.5
3,472,512	+		PFLU_RS15510	0.29	-0.2
3,472,512	+		PFLU_RS15510	0.29	+0.1
3,472,513	-		PFLU_RS15510	0.29	-0.8
3,472,513	-		PFLU_RS15510	0.29	+0.5
3,472,513	-		PFLU_RS15510	0.29	-2.8
3,472,513	-		PFLU_RS15510	0.29	+0.8
3,472,513	-		PFLU_RS15510	0.29	-0.3
3,472,513	-		PFLU_RS15510	0.29	+0.5
3,472,513	-		PFLU_RS15510	0.29	-0.3
3,472,513	-		PFLU_RS15510	0.29	+0.4
3,472,513	-		PFLU_RS15510	0.29	-0.1
3,472,575	+		PFLU_RS15510	0.35	+0.2
3,472,575	+		PFLU_RS15510	0.35	-2.5
3,472,575	+		PFLU_RS15510	0.35	-0.3
3,472,576	-		PFLU_RS15510	0.35	+0.3
3,472,576	-		PFLU_RS15510	0.35	+0.3
3,472,670	+		PFLU_RS15510	0.44	+0.6
3,472,670	+		PFLU_RS15510	0.44	+1.2
3,472,670	+		PFLU_RS15510	0.44	+1.2
3,472,670	+		PFLU_RS15510	0.44	+0.7
3,472,670	+		PFLU_RS15510	0.44	+0.4
3,472,671	-		PFLU_RS15510	0.45	-1.7
3,472,671	-		PFLU_RS15510	0.45	+1.2
3,472,671	-		PFLU_RS15510	0.45	+1.0
3,472,671	-		PFLU_RS15510	0.45	-0.6
3,472,728	-		PFLU_RS15510	0.50	+0.2
3,472,728	-		PFLU_RS15510	0.50	+0.0
3,472,728	-		PFLU_RS15510	0.50	-0.0
3,472,773	+		PFLU_RS15510	0.55	-0.8
3,472,774	-		PFLU_RS15510	0.55	-0.5
3,472,797	+		PFLU_RS15510	0.57	+0.2
3,472,797	+		PFLU_RS15510	0.57	-0.2
3,472,797	+		PFLU_RS15510	0.57	+0.7
3,472,798	-		PFLU_RS15510	0.57	-0.5
3,472,821	+		PFLU_RS15510	0.59	-0.7
3,472,821	+		PFLU_RS15510	0.59	+0.3
3,472,821	+		PFLU_RS15510	0.59	+0.7
3,472,821	+		PFLU_RS15510	0.59	-0.3
3,472,821	+		PFLU_RS15510	0.59	+1.8
3,472,821	+		PFLU_RS15510	0.59	-0.2
3,472,822	-		PFLU_RS15510	0.59	-0.3
3,472,822	-		PFLU_RS15510	0.59	+1.1
3,472,822	-		PFLU_RS15510	0.59	-0.0
3,472,822	-		PFLU_RS15510	0.59	-0.1
3,472,853	+		PFLU_RS15510	0.62	-0.0
3,472,853	+		PFLU_RS15510	0.62	-0.2
3,472,853	+		PFLU_RS15510	0.62	-0.6
3,472,854	-		PFLU_RS15510	0.62	+0.3
3,472,854	-		PFLU_RS15510	0.62	+1.6
3,472,854	-		PFLU_RS15510	0.62	-0.1
3,472,854	-		PFLU_RS15510	0.62	-0.8
3,472,923	+		PFLU_RS15510	0.69	-0.2
3,472,923	+		PFLU_RS15510	0.69	+0.3
3,472,923	+		PFLU_RS15510	0.69	-0.6
3,472,924	-		PFLU_RS15510	0.69	-0.5
3,472,924	-		PFLU_RS15510	0.69	+0.7
3,472,924	-		PFLU_RS15510	0.69	+0.8
3,472,924	-		PFLU_RS15510	0.69	-0.3
3,472,924	-		PFLU_RS15510	0.69	+1.5
3,472,924	-		PFLU_RS15510	0.69	-0.5
3,472,924	-		PFLU_RS15510	0.69	-1.2
3,472,924	-		PFLU_RS15510	0.69	-1.2
3,472,924	-		PFLU_RS15510	0.69	+0.1
3,472,924	-		PFLU_RS15510	0.69	-0.2
3,472,924	-		PFLU_RS15510	0.69	-1.1
3,472,924	-		PFLU_RS15510	0.69	+0.4
3,473,164	-				-0.1
3,473,164	-				-1.2
3,473,164	-				+0.0
3,473,197	+				+0.4
3,473,198	-				+0.1
3,473,206	+				-1.1
3,473,206	+				+1.3
3,473,207	-				-0.6
3,473,224	+				+0.1
3,473,225	-				-0.9
3,473,251	+				-0.4
3,473,251	+				-0.8
3,473,251	+				+0.3
3,473,251	+				+1.4
3,473,251	+				-0.0
3,473,251	+				+0.1
3,473,251	+				+0.2
3,473,251	+				-0.5
3,473,252	-				+0.1
3,473,252	-				-0.2
3,473,252	-				-0.4
3,473,252	-				+0.1
3,473,252	-				-0.6
3,473,252	-				-1.0
3,473,279	+				-1.5
3,473,279	+				+0.3
3,473,280	-				+0.5
3,473,280	-				+0.2
3,473,280	-				+0.4
3,473,461	+		PFLU_RS15515	0.40	-0.1
3,473,542	+		PFLU_RS15515	0.61	+1.2
3,473,543	-		PFLU_RS15515	0.62	+0.7
3,473,560	+		PFLU_RS15515	0.66	+0.3
3,473,560	+		PFLU_RS15515	0.66	+0.1
3,473,631	+		PFLU_RS15515	0.85	+0.3
3,473,632	-		PFLU_RS15515	0.85	+0.2
3,473,632	-		PFLU_RS15515	0.85	+0.8
3,473,632	-		PFLU_RS15515	0.85	-0.4
3,473,661	+				+0.5
3,473,661	+				-1.0
3,473,661	+				-0.8
3,473,662	-				+0.5
3,473,669	+				-1.5
3,473,669	+				-1.1
3,473,669	+				-0.8
3,473,669	+				+0.2
3,473,669	+				-0.5
3,473,669	+				+0.3
3,473,670	-				+0.5
3,473,670	-				-0.1
3,473,670	-				+0.4
3,473,670	-				+0.5
3,473,670	-				+0.7
3,473,673	+				+0.8
3,473,673	+				-0.3
3,473,673	+				+0.9
3,473,673	+				+0.6
3,473,673	+				-1.5
3,473,673	+				+0.3
3,473,673	+				+1.2
3,473,673	+				+0.5
3,473,673	+				-1.0
3,473,673	+				-0.3
3,473,673	+				+0.1
3,473,673	+				+0.2
3,473,673	+				+1.8
3,473,673	+				-0.2
3,473,673	+				+1.9
3,473,673	+				+0.4
3,473,673	+				-1.3
3,473,673	+				-0.1
3,473,673	+				-0.4
3,473,673	+				-0.1
3,473,673	+				+0.5
3,473,674	-				-1.2
3,473,674	-				-0.3
3,473,674	-				+0.0
3,473,674	-				-0.7
3,473,674	-				+1.2
3,473,674	-				+1.0
3,473,674	-				+0.4
3,473,674	-				+1.1
3,473,674	-				+1.3
3,473,674	-				-0.3
3,473,674	-				+0.8
3,473,674	-				-0.1
3,473,674	-				+1.4
3,473,674	-				+1.1
3,473,674	-				+0.6
3,473,674	-				+0.2
3,473,674	-				+0.9
3,473,674	-				+0.9
3,473,674	-				-0.2
3,473,674	-				+0.9
3,473,674	-				+0.0
3,473,674	-				-0.5
3,473,674	-				+1.5
3,473,674	-				-0.7
3,473,677	+				-0.9
3,473,677	+				-0.4
3,473,678	-				-1.3
3,473,693	+				+0.6
3,473,693	+				+0.0
3,473,708	-				+0.0
3,473,770	-				+1.3
3,473,779	+				+0.4
3,473,779	+				+0.8
3,473,780	-				-0.3
3,473,798	+				+0.9
3,473,798	+				+0.5
3,473,799	-				-0.9
3,473,967	+		PFLU_RS15520	0.20	+0.6
3,473,968	-		PFLU_RS15520	0.20	+0.2
3,473,968	-		PFLU_RS15520	0.20	+0.8
3,473,968	-		PFLU_RS15520	0.20	+0.4
3,474,017	+		PFLU_RS15520	0.25	-0.3
3,474,018	+		PFLU_RS15520	0.25	-0.5
3,474,018	-		PFLU_RS15520	0.25	+0.3
3,474,018	-		PFLU_RS15520	0.25	-0.3
3,474,018	-		PFLU_RS15520	0.25	-0.5
3,474,099	-		PFLU_RS15520	0.33	-0.4
3,474,120	+		PFLU_RS15520	0.35	-0.3
3,474,120	+		PFLU_RS15520	0.35	+0.4
3,474,153	+		PFLU_RS15520	0.38	+0.5
3,474,153	+		PFLU_RS15520	0.38	-0.6
3,474,153	+		PFLU_RS15520	0.38	-2.3
3,474,154	-		PFLU_RS15520	0.38	-0.2
3,474,154	-		PFLU_RS15520	0.38	-1.1
3,474,154	-		PFLU_RS15520	0.38	+0.8
3,474,154	-		PFLU_RS15520	0.38	-0.6
3,474,245	+		PFLU_RS15520	0.47	-0.9
3,474,245	+		PFLU_RS15520	0.47	+0.3
3,474,246	-		PFLU_RS15520	0.47	+0.2
3,474,296	+		PFLU_RS15520	0.52	-1.3
3,474,296	+		PFLU_RS15520	0.52	-0.5
3,474,296	+		PFLU_RS15520	0.52	+1.4
3,474,296	+		PFLU_RS15520	0.52	-0.1
3,474,296	+		PFLU_RS15520	0.52	+0.4
3,474,296	+		PFLU_RS15520	0.52	-0.3
3,474,296	+		PFLU_RS15520	0.52	+0.3
3,474,296	+		PFLU_RS15520	0.52	-0.5
3,474,297	-		PFLU_RS15520	0.52	-0.3
3,474,297	-		PFLU_RS15520	0.52	-1.1
3,474,297	-		PFLU_RS15520	0.52	-0.2
3,474,297	-		PFLU_RS15520	0.52	-1.1
3,474,297	-		PFLU_RS15520	0.52	+1.3
3,474,365	+		PFLU_RS15520	0.58	-0.9
3,474,373	+		PFLU_RS15520	0.59	+0.2
3,474,373	+		PFLU_RS15520	0.59	+0.4
3,474,373	+		PFLU_RS15520	0.59	-1.1
3,474,580	-		PFLU_RS15520	0.79	+0.3
3,474,671	+		PFLU_RS15520	0.88	-0.1
3,474,671	+		PFLU_RS15520	0.88	-0.0
3,474,671	+		PFLU_RS15520	0.88	-0.5
3,474,672	-		PFLU_RS15520	0.88	+2.3