Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12420

Experiment: Sucrose (C) and Glycine betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with MOPS
2,752,584	+				+0.6
2,752,584	+				+1.4
2,752,584	+				+0.6
2,752,584	+				-2.2
2,752,584	+				+0.4
2,752,585	-				-1.8
2,752,641	+				-1.2
2,752,641	+				+0.1
2,752,641	+				+0.1
2,752,641	+				+0.5
2,752,641	+				-1.2
2,752,641	+				-0.2
2,752,642	-				-0.2
2,752,642	-				+0.5
2,752,642	-				-0.4
2,752,642	-				-0.3
2,752,642	-				-0.3
2,752,642	-				-0.7
2,752,642	-				-0.5
2,752,642	-				+0.2
2,752,642	-				-0.4
2,752,657	+				+0.2
2,752,671	+				-2.6
2,752,671	+				-0.7
2,752,672	-				-0.2
2,752,674	+				-0.4
2,752,716	+				-0.3
2,752,716	+				-0.5
2,752,716	+				-0.3
2,752,716	+				-0.3
2,752,716	+				+0.6
2,752,716	+				-0.1
2,752,717	-				-0.5
2,752,717	-				-0.6
2,752,717	-				+0.4
2,752,945	+		PFLU_RS12415	0.41	-0.3
2,752,946	-		PFLU_RS12415	0.41	-0.5
2,753,006	+		PFLU_RS12415	0.52	+0.2
2,753,007	-		PFLU_RS12415	0.52	+0.9
2,753,068	+		PFLU_RS12415	0.62	-0.6
2,753,068	+		PFLU_RS12415	0.62	+0.3
2,753,068	+		PFLU_RS12415	0.62	+0.9
2,753,068	+		PFLU_RS12415	0.62	+0.2
2,753,068	+		PFLU_RS12415	0.62	+0.8
2,753,068	+		PFLU_RS12415	0.62	-2.3
2,753,068	+		PFLU_RS12415	0.62	+0.7
2,753,068	+		PFLU_RS12415	0.62	-0.9
2,753,069	-		PFLU_RS12415	0.62	-0.9
2,753,069	-		PFLU_RS12415	0.62	+0.0
2,753,069	-		PFLU_RS12415	0.62	-0.4
2,753,069	-		PFLU_RS12415	0.62	-0.4
2,753,069	-		PFLU_RS12415	0.62	+0.3
2,753,144	+		PFLU_RS12415	0.75	-0.3
2,753,144	+		PFLU_RS12415	0.75	+0.5
2,753,144	+		PFLU_RS12415	0.75	+0.7
2,753,144	+		PFLU_RS12415	0.75	+0.3
2,753,144	+		PFLU_RS12415	0.75	+2.6
2,753,144	+		PFLU_RS12415	0.75	+0.4
2,753,144	+		PFLU_RS12415	0.75	-0.5
2,753,144	+		PFLU_RS12415	0.75	-0.5
2,753,144	+		PFLU_RS12415	0.75	-0.9
2,753,145	-		PFLU_RS12415	0.75	-1.1
2,753,145	-		PFLU_RS12415	0.75	-1.6
2,753,204	+		PFLU_RS12415	0.85	+2.2
2,753,292	+				-0.4
2,753,292	+				+0.6
2,753,292	+				-0.6
2,753,292	+				+1.1
2,753,292	+				+1.1
2,753,292	+				+0.7
2,753,292	+				+0.4
2,753,292	+				+0.9
2,753,292	+				+1.3
2,753,292	+				-1.2
2,753,292	+				+0.8
2,753,292	+				-0.2
2,753,292	+				-1.1
2,753,292	+				+0.4
2,753,292	+				+0.4
2,753,293	-				-0.8
2,753,293	-				-0.2
2,753,293	-				-2.7
2,753,293	-				+0.1
2,753,293	-				+0.5
2,753,293	-				+1.1
2,753,293	-				-0.8
2,753,293	-				-0.4
2,753,293	-				-1.4
2,753,325	+				-0.5
2,753,325	+				-0.3
2,753,325	+				+0.2
2,753,334	+				+0.9
2,753,335	-				+1.4
2,753,357	+				-0.2
2,753,358	-				+0.7
2,753,358	-				-0.5
2,753,366	+				+0.3
2,753,366	+				-0.4
2,753,367	-				+0.2
2,753,367	-				+0.8
2,753,370	+				-0.1
2,753,370	+				-0.4
2,753,370	+				-0.9
2,753,370	+				+0.5
2,753,371	-				+1.2
2,753,393	+				-0.5
2,753,393	+				-0.1
2,753,393	+				+0.5
2,753,394	-				+0.4
2,753,394	-				+0.8
2,753,394	-				-1.0
2,753,394	-				-1.0
2,753,483	-				+0.8
2,753,504	+				-1.0
2,753,504	+				+0.7
2,753,505	-				-0.6
2,753,505	-				-0.3
2,753,505	-				+0.3
2,753,629	+		PFLU_RS12420	0.17	+0.5
2,753,629	+		PFLU_RS12420	0.17	+0.3
2,753,649	+		PFLU_RS12420	0.19	+0.8
2,753,650	-		PFLU_RS12420	0.19	-1.6
2,753,823	+		PFLU_RS12420	0.34	+0.6
2,753,992	+		PFLU_RS12420	0.48	+1.4
2,753,992	+		PFLU_RS12420	0.48	+0.8
2,753,993	-		PFLU_RS12420	0.48	-0.5
2,753,993	-		PFLU_RS12420	0.48	+0.7
2,753,993	-		PFLU_RS12420	0.48	+1.1
2,753,993	-		PFLU_RS12420	0.48	-0.3
2,753,993	-		PFLU_RS12420	0.48	+0.8
2,753,993	-		PFLU_RS12420	0.48	+1.1
2,753,993	-		PFLU_RS12420	0.48	-0.1
2,754,178	+		PFLU_RS12420	0.64	+0.2
2,754,178	+		PFLU_RS12420	0.64	+0.1
2,754,178	+		PFLU_RS12420	0.64	+0.1
2,754,178	+		PFLU_RS12420	0.64	+0.5
2,754,179	-		PFLU_RS12420	0.64	-1.5
2,754,179	-		PFLU_RS12420	0.64	-0.5
2,754,179	-		PFLU_RS12420	0.64	+0.8
2,754,179	-		PFLU_RS12420	0.64	+0.3
2,754,179	-		PFLU_RS12420	0.64	+2.0
2,754,179	-		PFLU_RS12420	0.64	-1.5
2,754,179	-		PFLU_RS12420	0.64	+0.6
2,754,192	+		PFLU_RS12420	0.65	+0.3
2,754,192	+		PFLU_RS12420	0.65	-0.5
2,754,192	+		PFLU_RS12420	0.65	+0.1
2,754,192	+		PFLU_RS12420	0.65	-0.6
2,754,192	+		PFLU_RS12420	0.65	+0.3
2,754,192	+		PFLU_RS12420	0.65	+0.4
2,754,193	-		PFLU_RS12420	0.65	+1.0
2,754,351	-		PFLU_RS12420	0.79	-1.4
2,754,678	-		PFLU_RS12425	0.20	-0.8
2,754,797	+		PFLU_RS12425	0.53	+0.4
2,754,797	+		PFLU_RS12425	0.53	+0.4
2,754,797	+		PFLU_RS12425	0.53	+1.2
2,754,797	+		PFLU_RS12425	0.53	-0.6
2,754,797	+		PFLU_RS12425	0.53	+0.1
2,754,797	+		PFLU_RS12425	0.53	+0.0
2,754,797	+		PFLU_RS12425	0.53	-1.9
2,754,797	+		PFLU_RS12425	0.53	-0.7
2,754,798	-		PFLU_RS12425	0.53	+0.4
2,754,798	-		PFLU_RS12425	0.53	-0.3
2,754,798	-		PFLU_RS12425	0.53	-0.8
2,754,798	-		PFLU_RS12425	0.53	+0.5
2,754,798	-		PFLU_RS12425	0.53	-0.4
2,754,805	+		PFLU_RS12425	0.55	+0.8
2,754,805	+		PFLU_RS12425	0.55	+0.2
2,754,806	-		PFLU_RS12425	0.55	+1.0
2,754,862	+		PFLU_RS12425	0.71	-0.7
2,754,862	+		PFLU_RS12425	0.71	-0.4
2,754,862	+		PFLU_RS12425	0.71	+0.3
2,754,862	+		PFLU_RS12425	0.71	+0.2
2,754,862	+		PFLU_RS12425	0.71	-1.4
2,754,862	+		PFLU_RS12425	0.71	+1.3
2,754,863	-		PFLU_RS12425	0.71	-0.0
2,754,863	-		PFLU_RS12425	0.71	+0.7
2,754,863	-		PFLU_RS12425	0.71	+0.7
2,754,863	-		PFLU_RS12425	0.71	+0.2
2,754,863	-		PFLU_RS12425	0.71	-0.1
2,754,930	-		PFLU_RS12425	0.89	-1.9
2,754,940	+				-0.2
2,754,940	+				-0.5
2,754,940	+				+0.8
2,754,940	+				-1.0
2,754,940	+				-1.2
2,754,940	+				-0.7
2,754,941	-				+0.2
2,754,941	-				+0.0
2,754,941	-				+2.8
2,754,941	-				-0.2
2,754,941	-				+0.9
2,754,941	-				-0.3
2,755,017	+		PFLU_RS12430	0.21	+1.3
2,755,017	+		PFLU_RS12430	0.21	-0.1
2,755,017	+		PFLU_RS12430	0.21	+1.6
2,755,017	+		PFLU_RS12430	0.21	+1.3
2,755,018	-		PFLU_RS12430	0.21	-0.2
2,755,018	-		PFLU_RS12430	0.21	-2.0
2,755,018	-		PFLU_RS12430	0.21	+0.1
2,755,018	-		PFLU_RS12430	0.21	+0.2
2,755,018	-		PFLU_RS12430	0.21	-0.1
2,755,018	-		PFLU_RS12430	0.21	+1.1
2,755,018	-		PFLU_RS12430	0.21	-1.1
2,755,018	-		PFLU_RS12430	0.21	-0.8
2,755,018	-		PFLU_RS12430	0.21	-2.0
2,755,122	+		PFLU_RS12430	0.62	-0.3
2,755,122	+		PFLU_RS12430	0.62	+0.8
2,755,122	+		PFLU_RS12430	0.62	-2.8
2,755,122	+		PFLU_RS12430	0.62	+0.1
2,755,123	-		PFLU_RS12430	0.63	+1.8
2,755,123	-		PFLU_RS12430	0.63	-1.1
2,755,123	-		PFLU_RS12430	0.63	-0.1
2,755,162	+		PFLU_RS12430	0.78	+0.5
2,755,162	+		PFLU_RS12430	0.78	+0.7
2,755,162	+		PFLU_RS12430	0.78	+0.6
2,755,163	-		PFLU_RS12430	0.79	-1.5
2,755,163	-		PFLU_RS12430	0.79	+0.2
2,755,163	-		PFLU_RS12430	0.79	-1.0
2,755,237	-				-0.1
2,755,242	+				+0.3
2,755,271	+				+0.3
2,755,271	+				+0.9
2,755,272	-				-0.9
2,755,272	-				+0.6
2,755,306	+				-0.1
2,755,306	+				+0.6
2,755,306	+				+0.9
2,755,306	+				+0.6
2,755,306	+				+0.3
2,755,307	-				-0.0
2,755,307	-				-0.2
2,755,307	-				-1.2
2,755,307	-				+0.8
2,755,374	-				-1.8
2,755,374	-				-0.6
2,755,374	-				+0.1
2,755,375	+				-2.0
2,755,405	+				-0.6
2,755,405	+				+0.5
2,755,406	-				+0.0
2,755,406	-				+0.6
2,755,406	-				+0.6
2,755,464	+				+0.6
2,755,585	+				-0.1
2,755,586	-				+0.8