Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08735

Experiment: Sucrose (C) and Glycine betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with MOPS
1,940,835	+		PFLU_RS08730	0.60	+0.1
1,940,920	-		PFLU_RS08730	0.66	+0.9
1,940,920	-		PFLU_RS08730	0.66	-0.9
1,940,920	-		PFLU_RS08730	0.66	+0.7
1,941,013	+		PFLU_RS08730	0.72	-0.3
1,941,013	+		PFLU_RS08730	0.72	+0.3
1,941,014	-		PFLU_RS08730	0.73	-1.0
1,941,025	+		PFLU_RS08730	0.73	-1.7
1,941,038	+		PFLU_RS08730	0.74	+0.6
1,941,038	+		PFLU_RS08730	0.74	+0.7
1,941,038	+		PFLU_RS08730	0.74	-0.5
1,941,038	+		PFLU_RS08730	0.74	-0.3
1,941,038	+		PFLU_RS08730	0.74	+0.5
1,941,038	+		PFLU_RS08730	0.74	-0.6
1,941,038	+		PFLU_RS08730	0.74	+0.8
1,941,038	+		PFLU_RS08730	0.74	-1.2
1,941,038	+		PFLU_RS08730	0.74	-0.3
1,941,038	+		PFLU_RS08730	0.74	+1.8
1,941,038	+		PFLU_RS08730	0.74	-0.3
1,941,039	-		PFLU_RS08730	0.74	+1.8
1,941,039	-		PFLU_RS08730	0.74	-1.5
1,941,039	-		PFLU_RS08730	0.74	+1.0
1,941,039	-		PFLU_RS08730	0.74	-0.7
1,941,039	-		PFLU_RS08730	0.74	-0.4
1,941,039	-		PFLU_RS08730	0.74	+0.9
1,941,039	-		PFLU_RS08730	0.74	+0.1
1,941,039	-		PFLU_RS08730	0.74	+1.3
1,941,039	-		PFLU_RS08730	0.74	+1.5
1,941,039	-		PFLU_RS08730	0.74	-0.4
1,941,039	-		PFLU_RS08730	0.74	+0.5
1,941,047	+		PFLU_RS08730	0.75	+0.5
1,941,047	+		PFLU_RS08730	0.75	-1.4
1,941,047	+		PFLU_RS08730	0.75	+0.4
1,941,047	+		PFLU_RS08730	0.75	+0.8
1,941,048	-		PFLU_RS08730	0.75	-1.4
1,941,055	+		PFLU_RS08730	0.75	+0.9
1,941,055	+		PFLU_RS08730	0.75	+0.5
1,941,055	+		PFLU_RS08730	0.75	+0.3
1,941,055	+		PFLU_RS08730	0.75	+0.3
1,941,055	+		PFLU_RS08730	0.75	+0.1
1,941,055	+		PFLU_RS08730	0.75	-0.8
1,941,055	+		PFLU_RS08730	0.75	+1.1
1,941,055	+		PFLU_RS08730	0.75	+0.4
1,941,055	+		PFLU_RS08730	0.75	+0.1
1,941,056	-		PFLU_RS08730	0.75	+0.7
1,941,056	-		PFLU_RS08730	0.75	+0.6
1,941,056	-		PFLU_RS08730	0.75	+0.4
1,941,056	-		PFLU_RS08730	0.75	+0.8
1,941,056	-		PFLU_RS08730	0.75	+0.5
1,941,056	-		PFLU_RS08730	0.75	+0.2
1,941,056	-		PFLU_RS08730	0.75	+0.6
1,941,056	-		PFLU_RS08730	0.75	-1.0
1,941,056	-		PFLU_RS08730	0.75	+0.1
1,941,138	-		PFLU_RS08730	0.81	+0.6
1,941,138	-		PFLU_RS08730	0.81	-0.6
1,941,138	-		PFLU_RS08730	0.81	-0.3
1,941,200	+		PFLU_RS08730	0.85	+0.6
1,941,200	+		PFLU_RS08730	0.85	+0.2
1,941,200	+		PFLU_RS08730	0.85	-1.0
1,941,201	-		PFLU_RS08730	0.86	-0.0
1,941,300	-				-0.2
1,941,330	+				+0.3
1,941,330	+				-0.1
1,941,330	+				-1.3
1,941,330	+				-0.1
1,941,331	-				-0.5
1,941,331	-				+2.0
1,941,331	-				-0.3
1,941,331	-				+0.6
1,941,353	-				+0.2
1,941,359	+				-1.0
1,941,359	+				+1.0
1,941,360	-				-0.1
1,941,360	-				+0.4
1,941,384	+				+1.9
1,941,385	-				+0.9
1,941,387	+				+0.8
1,941,387	+				+1.1
1,941,387	+				-0.1
1,941,388	-				+1.5
1,941,388	-				-0.1
1,941,388	-				-0.1
1,941,393	+				-0.4
1,941,393	+				-0.3
1,941,393	+				-1.9
1,941,393	+				+1.0
1,941,393	+				-1.0
1,941,393	+				+1.2
1,941,394	-				+1.1
1,941,394	-				+1.2
1,941,394	-				+1.4
1,941,394	-				+0.6
1,941,412	+				-0.0
1,941,412	+				-0.5
1,941,412	+				-0.3
1,941,412	+				-0.7
1,941,412	+				+0.8
1,941,412	+				+0.4
1,941,412	+				+2.1
1,941,412	+				-0.9
1,941,412	+				-0.5
1,941,412	+				-0.1
1,941,413	-				+0.1
1,941,413	-				+0.4
1,941,413	-				+0.5
1,941,413	-				-0.5
1,941,413	-				-0.2
1,941,413	-				+0.1
1,941,413	-				+0.0
1,941,413	-				+0.2
1,941,413	-				-0.3
1,941,413	-				-1.8
1,941,413	-				+0.7
1,941,413	-				-2.4
1,941,420	+				-0.1
1,941,420	+				+0.3
1,941,425	+				-0.0
1,941,425	+				-0.3
1,941,426	-				-1.0
1,941,426	-				+0.5
1,941,429	+				-0.4
1,941,429	+				-0.2
1,941,429	+				+0.7
1,941,429	+				-1.1
1,941,430	-				+0.9
1,941,430	-				-0.5
1,941,430	-				-0.6
1,941,430	-				-0.4
1,941,430	-				-0.1
1,941,430	-				+0.2
1,941,430	-				+0.7
1,941,430	-				+0.2
1,941,436	+				-1.5
1,941,436	+				-0.9
1,941,436	+				-0.8
1,941,436	+				+0.8
1,941,436	+				-1.1
1,941,436	+				-1.5
1,941,438	+				+0.0
1,941,438	+				-2.3
1,941,460	+				-0.2
1,941,460	+				+0.7
1,941,460	+				+0.1
1,941,461	-				-0.4
1,941,461	-				-0.3
1,941,461	-				-0.3
1,941,461	-				-0.5
1,941,461	-				-0.4
1,941,461	-				+0.6
1,941,461	-				+0.5
1,941,461	-				-2.1
1,941,480	+				+0.7
1,941,480	+				+1.0
1,941,482	+				+0.3
1,941,483	-				-0.7
1,941,483	-				-0.3
1,941,489	+				+0.4
1,941,489	+				+0.7
1,941,490	-				+0.3
1,941,490	-				-0.1
1,941,490	-				-1.8
1,941,490	-				-0.2
1,941,526	+				-1.1
1,941,527	-				+0.2
1,941,527	-				+0.1
1,941,547	+				-1.2
1,941,547	+				-0.0
1,941,548	-				+0.3
1,941,548	-				-0.8
1,941,548	-				-0.1
1,941,548	-				+0.5
1,941,572	+				+1.3
1,941,572	+				+0.5
1,941,572	+				+0.1
1,941,573	-				-2.2
1,941,587	-				-0.2
1,941,625	+				-0.2
1,941,626	-				+0.8
1,941,626	-				+0.4
1,941,657	+				-0.2
1,941,657	+				-0.5
1,941,658	-				-0.8
1,941,720	+				-0.5
1,941,721	-				-0.0
1,941,758	+				+0.2
1,941,758	+				+0.5
1,941,758	+				-0.5
1,941,758	+				+0.5
1,941,758	+				-0.1
1,941,759	-				+0.4
1,941,796	+		PFLU_RS08735	0.21	+0.1
1,941,933	+		PFLU_RS08735	0.73	+0.6
1,942,272	+				-0.5
1,942,272	+				-0.6
1,942,272	+				-0.0
1,942,272	+				-0.3
1,942,272	+				+0.9
1,942,272	+				-0.2
1,942,273	-				+0.5
1,942,273	-				-0.0
1,942,273	-				+0.0
1,942,273	-				+0.1
1,942,273	-				-0.3
1,942,273	-				-0.9
1,942,275	+				-0.5
1,942,275	+				+0.2
1,942,275	+				+0.1
1,942,275	+				+0.5
1,942,275	+				-0.6
1,942,275	+				-0.3
1,942,276	-				+0.8
1,942,276	-				-1.0
1,942,276	-				+1.8
1,942,276	-				-1.0
1,942,276	-				-1.4
1,942,276	-				+1.3
1,942,276	-				-0.3
1,942,276	-				-0.9
1,942,276	-				-0.5
1,942,276	-				-0.5
1,942,276	-				-0.1
1,942,297	+				-1.2
1,942,298	-				+0.7
1,942,298	-				+1.0
1,942,364	+				-0.9
1,942,364	+				-0.6
1,942,364	+				+0.8
1,942,364	+				-1.0
1,942,364	+				+0.1
1,942,364	+				-0.2
1,942,364	+				-1.1
1,942,364	+				+0.9
1,942,364	+				+0.2
1,942,364	+				+1.6
1,942,364	+				-0.2
1,942,364	+				+0.3
1,942,364	+				+0.6
1,942,364	+				+0.4
1,942,365	-				+1.1
1,942,365	-				+0.2
1,942,365	-				+0.5
1,942,365	-				+0.5
1,942,365	-				-0.6
1,942,365	-				-1.0
1,942,365	-				+0.1
1,942,365	-				-0.3
1,942,365	-				-0.8
1,942,365	-				+0.9
1,942,365	-				+1.1
1,942,365	-				+0.2
1,942,365	-				+0.1
1,942,365	-				+0.2
1,942,365	-				+1.5
1,942,365	-				+0.4
1,942,365	-				+1.4
1,942,365	-				+0.6
1,942,365	-				-0.3
1,942,365	-				+0.2
1,942,365	-				+0.7
1,942,365	-				-0.3
1,942,369	+				+0.8
1,942,370	-				-1.0
1,942,625	+		PFLU_RS08740	0.32	-1.1
1,942,625	+		PFLU_RS08740	0.32	-0.6
1,942,625	+		PFLU_RS08740	0.32	+0.1
1,942,626	-		PFLU_RS08740	0.32	-0.0
1,942,626	-		PFLU_RS08740	0.32	-1.2
1,943,000	+		PFLU_RS08740	0.77	-0.4