Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05890

Experiment: Sucrose (C) and Glycine betaine (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with MOPS
1,318,189	-				+0.9
1,318,195	+				+0.5
1,318,305	-		PFLU_RS05885	0.18	+1.9
1,318,418	+		PFLU_RS05885	0.29	+0.4
1,318,419	-		PFLU_RS05885	0.29	-0.6
1,318,419	-		PFLU_RS05885	0.29	-0.1
1,318,651	+		PFLU_RS05885	0.51	+0.3
1,318,651	+		PFLU_RS05885	0.51	+0.2
1,318,652	-		PFLU_RS05885	0.51	-1.7
1,318,747	+		PFLU_RS05885	0.60	+0.2
1,318,763	+		PFLU_RS05885	0.61	+0.4
1,318,763	+		PFLU_RS05885	0.61	+0.2
1,318,763	+		PFLU_RS05885	0.61	+0.2
1,318,764	-		PFLU_RS05885	0.61	+1.7
1,318,764	-		PFLU_RS05885	0.61	-2.7
1,318,764	-		PFLU_RS05885	0.61	-0.0
1,318,764	-		PFLU_RS05885	0.61	-1.0
1,318,912	+		PFLU_RS05885	0.75	+0.7
1,318,912	+		PFLU_RS05885	0.75	+0.5
1,318,912	+		PFLU_RS05885	0.75	-0.8
1,318,912	+		PFLU_RS05885	0.75	-0.1
1,318,913	-		PFLU_RS05885	0.75	-0.1
1,318,913	-		PFLU_RS05885	0.75	-0.9
1,318,916	+		PFLU_RS05885	0.76	-0.7
1,318,916	+		PFLU_RS05885	0.76	+0.1
1,318,917	-		PFLU_RS05885	0.76	-1.5
1,318,917	-		PFLU_RS05885	0.76	-0.7
1,318,917	-		PFLU_RS05885	0.76	-0.4
1,318,917	-		PFLU_RS05885	0.76	+0.8
1,318,917	-		PFLU_RS05885	0.76	-1.0
1,318,917	-		PFLU_RS05885	0.76	-0.0
1,318,917	-		PFLU_RS05885	0.76	-0.2
1,318,917	-		PFLU_RS05885	0.76	+1.5
1,318,917	-		PFLU_RS05885	0.76	-1.1
1,318,917	-		PFLU_RS05885	0.76	+1.1
1,318,982	+		PFLU_RS05885	0.82	+2.1
1,318,983	-		PFLU_RS05885	0.82	-0.7
1,318,988	+		PFLU_RS05885	0.82	-1.7
1,318,988	+		PFLU_RS05885	0.82	-0.2
1,318,988	+		PFLU_RS05885	0.82	-0.9
1,318,988	+		PFLU_RS05885	0.82	+0.1
1,318,989	-		PFLU_RS05885	0.83	+0.6
1,318,989	-		PFLU_RS05885	0.83	-0.1
1,318,989	-		PFLU_RS05885	0.83	-0.1
1,318,989	-		PFLU_RS05885	0.83	+0.2
1,319,192	+				-0.7
1,319,192	+				+0.4
1,319,192	+				+0.5
1,319,192	+				+1.2
1,319,192	+				-1.2
1,319,193	-				+0.4
1,319,193	-				+0.1
1,319,193	-				+0.4
1,319,193	-				+0.5
1,319,193	-				-0.1
1,319,193	-				+0.5
1,319,199	+				+0.7
1,319,199	+				+0.3
1,319,199	+				-0.0
1,319,200	-				+0.7
1,319,200	-				+0.2
1,319,200	-				-0.2
1,319,383	+		PFLU_RS05890	0.43	+1.6
1,319,588	-		PFLU_RS05890	0.87	-0.1
1,319,637	+				-0.7
1,319,637	+				+0.9
1,319,638	-				+0.7
1,319,651	+				+1.2
1,319,651	+				-0.1
1,319,652	-				-0.1
1,319,652	-				+0.4
1,319,661	+				-0.8
1,319,661	+				+0.5
1,319,661	+				-0.8
1,319,661	+				+0.4
1,319,662	-				-0.5
1,319,662	-				-0.0
1,319,662	-				-0.1
1,319,686	+				+0.6
1,319,687	-				+0.6
1,319,740	+		PFLU_RS31430	0.14	+1.4
1,319,740	+		PFLU_RS31430	0.14	-0.2
1,319,740	+		PFLU_RS31430	0.14	+0.3
1,319,740	+		PFLU_RS31430	0.14	-1.1
1,319,740	+		PFLU_RS31430	0.14	-0.5
1,319,740	+		PFLU_RS31430	0.14	-0.0
1,319,740	+		PFLU_RS31430	0.14	+0.9
1,319,740	+		PFLU_RS31430	0.14	+0.7
1,319,740	+		PFLU_RS31430	0.14	-0.1
1,319,741	-		PFLU_RS31430	0.15	-0.0
1,319,741	-		PFLU_RS31430	0.15	-0.5
1,319,741	-		PFLU_RS31430	0.15	-0.4
1,319,741	-		PFLU_RS31430	0.15	+0.5
1,319,741	-		PFLU_RS31430	0.15	+0.1
1,319,741	-		PFLU_RS31430	0.15	+0.4
1,319,741	-		PFLU_RS31430	0.15	+0.5
1,319,741	-		PFLU_RS31430	0.15	+0.2
1,319,856	-		PFLU_RS31430	0.59	+0.7
1,319,856	-		PFLU_RS31430	0.59	+0.6
1,319,856	-		PFLU_RS31430	0.59	-0.1
1,319,863	+		PFLU_RS31430	0.61	-1.7
1,319,863	+		PFLU_RS31430	0.61	-0.3
1,319,864	-		PFLU_RS31430	0.62	+0.9
1,319,864	-		PFLU_RS31430	0.62	+0.6
1,319,966	+				-0.1
1,319,966	+				+1.3
1,319,966	+				-0.7
1,319,966	+				+0.8
1,319,966	+				-0.8
1,319,966	+				-0.8
1,319,966	+				+1.2
1,319,966	+				+1.1
1,319,966	+				-0.0
1,319,966	+				+0.1
1,319,966	+				-0.6
1,319,967	-				-0.1
1,319,967	-				+0.5
1,319,967	-				-0.2
1,319,967	-				-1.7
1,319,967	-				+0.0
1,319,967	-				+0.5
1,320,068	+		PFLU_RS05895	0.16	+1.1
1,320,068	+		PFLU_RS05895	0.16	+0.4
1,320,069	-		PFLU_RS05895	0.16	+1.5
1,320,210	-		PFLU_RS05895	0.28	+0.3
1,320,248	+		PFLU_RS05895	0.32	+0.4
1,320,248	+		PFLU_RS05895	0.32	-0.0
1,320,249	-		PFLU_RS05895	0.32	+0.3
1,320,249	-		PFLU_RS05895	0.32	-0.2
1,320,249	-		PFLU_RS05895	0.32	-0.1
1,320,249	-		PFLU_RS05895	0.32	-0.3
1,320,249	-		PFLU_RS05895	0.32	-0.2
1,320,249	-		PFLU_RS05895	0.32	-1.0
1,320,249	-		PFLU_RS05895	0.32	-0.6
1,320,259	+		PFLU_RS05895	0.33	+0.9
1,320,259	+		PFLU_RS05895	0.33	-0.2
1,320,259	+		PFLU_RS05895	0.33	+0.5
1,320,260	-		PFLU_RS05895	0.33	+0.4
1,320,287	+		PFLU_RS05895	0.35	-0.4
1,320,287	+		PFLU_RS05895	0.35	+0.8
1,320,287	+		PFLU_RS05895	0.35	-0.6
1,320,288	-		PFLU_RS05895	0.35	+1.9
1,320,288	-		PFLU_RS05895	0.35	+1.0
1,320,288	-		PFLU_RS05895	0.35	-1.0
1,320,409	+		PFLU_RS05895	0.46	+0.3
1,320,410	-		PFLU_RS05895	0.46	-0.3
1,320,410	-		PFLU_RS05895	0.46	+2.0
1,320,410	-		PFLU_RS05895	0.46	-0.8
1,320,410	-		PFLU_RS05895	0.46	+0.7
1,320,410	-		PFLU_RS05895	0.46	+0.8
1,320,573	+		PFLU_RS05895	0.61	-1.2
1,320,574	-		PFLU_RS05895	0.61	-1.3
1,320,574	-		PFLU_RS05895	0.61	+0.2
1,320,588	+		PFLU_RS05895	0.62	-0.1
1,320,588	+		PFLU_RS05895	0.62	+0.1
1,320,588	+		PFLU_RS05895	0.62	+0.4
1,320,588	+		PFLU_RS05895	0.62	-0.3
1,320,588	+		PFLU_RS05895	0.62	+0.9
1,320,588	+		PFLU_RS05895	0.62	-0.2
1,320,588	+		PFLU_RS05895	0.62	-0.4
1,320,588	+		PFLU_RS05895	0.62	-0.2
1,320,588	+		PFLU_RS05895	0.62	-0.8
1,320,588	+		PFLU_RS05895	0.62	-1.0
1,320,588	+		PFLU_RS05895	0.62	-0.3
1,320,588	+		PFLU_RS05895	0.62	+1.3
1,320,588	+		PFLU_RS05895	0.62	+0.1
1,320,588	+		PFLU_RS05895	0.62	+1.1
1,320,589	-		PFLU_RS05895	0.63	+0.5
1,320,589	-		PFLU_RS05895	0.63	+0.1
1,320,589	-		PFLU_RS05895	0.63	+0.5
1,320,589	-		PFLU_RS05895	0.63	+0.5
1,320,589	-		PFLU_RS05895	0.63	-0.4
1,320,589	-		PFLU_RS05895	0.63	+0.6
1,320,589	-		PFLU_RS05895	0.63	+0.1
1,320,589	-		PFLU_RS05895	0.63	-1.6
1,320,589	-		PFLU_RS05895	0.63	-1.4
1,320,589	-		PFLU_RS05895	0.63	+0.9
1,320,589	-		PFLU_RS05895	0.63	-0.4
1,320,589	-		PFLU_RS05895	0.63	-0.3
1,320,589	-		PFLU_RS05895	0.63	-0.2