Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24595 and BWI76_RS24600 are separated by 10 nucleotides BWI76_RS24600 and BWI76_RS24605 are separated by 10 nucleotides BWI76_RS24605 and BWI76_RS24610 are separated by 66 nucleotides
BWI76_RS24595: BWI76_RS24595 - dihydroxyacetone kinase subunit DhaK, at 5,126,406 to 5,127,476
_RS24595
BWI76_RS24600: BWI76_RS24600 - dihydroxyacetone kinase, at 5,127,487 to 5,128,119
_RS24600
BWI76_RS24605: BWI76_RS24605 - dihydroxyacetone kinase subunit DhaM, at 5,128,130 to 5,129,551
_RS24605
BWI76_RS24610: BWI76_RS24610 - dihydroxyacetone kinase, at 5,129,618 to 5,131,267
_RS24610
Position (kb) 5128
5129
5130 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5127.184 kb on - strand, within BWI76_RS24595 at 5127.384 kb on - strand at 5127.401 kb on + strand at 5127.444 kb on + strand at 5127.444 kb on + strand at 5127.452 kb on - strand at 5127.456 kb on + strand at 5127.456 kb on + strand at 5127.464 kb on - strand at 5127.464 kb on - strand at 5127.526 kb on - strand at 5127.624 kb on + strand, within BWI76_RS24600 at 5127.940 kb on - strand, within BWI76_RS24600 at 5128.013 kb on - strand, within BWI76_RS24600 at 5128.087 kb on + strand at 5128.266 kb on + strand at 5128.357 kb on - strand, within BWI76_RS24605 at 5128.375 kb on + strand, within BWI76_RS24605 at 5128.419 kb on - strand, within BWI76_RS24605 at 5128.437 kb on - strand, within BWI76_RS24605 at 5128.650 kb on + strand, within BWI76_RS24605 at 5128.676 kb on + strand, within BWI76_RS24605 at 5128.773 kb on + strand, within BWI76_RS24605 at 5128.773 kb on + strand, within BWI76_RS24605 at 5128.781 kb on - strand, within BWI76_RS24605 at 5128.918 kb on + strand, within BWI76_RS24605 at 5128.931 kb on - strand, within BWI76_RS24605 at 5129.094 kb on - strand, within BWI76_RS24605 at 5129.143 kb on - strand, within BWI76_RS24605 at 5129.226 kb on + strand, within BWI76_RS24605 at 5129.280 kb on + strand, within BWI76_RS24605 at 5129.295 kb on + strand, within BWI76_RS24605 at 5129.311 kb on + strand, within BWI76_RS24605 at 5129.321 kb on + strand, within BWI76_RS24605 at 5129.391 kb on - strand, within BWI76_RS24605 at 5129.391 kb on - strand, within BWI76_RS24605 at 5129.391 kb on - strand, within BWI76_RS24605 at 5129.405 kb on - strand, within BWI76_RS24605 at 5129.507 kb on + strand at 5129.577 kb on - strand at 5129.710 kb on + strand at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.313 kb on - strand, within BWI76_RS24610 at 5130.346 kb on + strand, within BWI76_RS24610
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 5,127,184 - BWI76_RS24595 0.73 +0.6 5,127,384 - +0.8 5,127,401 + -0.0 5,127,444 + +0.3 5,127,444 + +0.1 5,127,452 - -0.5 5,127,456 + +0.5 5,127,456 + -0.5 5,127,464 - +0.3 5,127,464 - +0.1 5,127,526 - +1.1 5,127,624 + BWI76_RS24600 0.22 -0.9 5,127,940 - BWI76_RS24600 0.72 -0.1 5,128,013 - BWI76_RS24600 0.83 -0.2 5,128,087 + -0.4 5,128,266 + +0.1 5,128,357 - BWI76_RS24605 0.16 -1.4 5,128,375 + BWI76_RS24605 0.17 -0.2 5,128,419 - BWI76_RS24605 0.20 -1.3 5,128,437 - BWI76_RS24605 0.22 -1.9 5,128,650 + BWI76_RS24605 0.37 -1.7 5,128,676 + BWI76_RS24605 0.38 +1.9 5,128,773 + BWI76_RS24605 0.45 -0.7 5,128,773 + BWI76_RS24605 0.45 -0.5 5,128,781 - BWI76_RS24605 0.46 -0.1 5,128,918 + BWI76_RS24605 0.55 -1.0 5,128,931 - BWI76_RS24605 0.56 -1.2 5,129,094 - BWI76_RS24605 0.68 -1.7 5,129,143 - BWI76_RS24605 0.71 -0.8 5,129,226 + BWI76_RS24605 0.77 -0.7 5,129,280 + BWI76_RS24605 0.81 -1.4 5,129,295 + BWI76_RS24605 0.82 +2.5 5,129,311 + BWI76_RS24605 0.83 -1.3 5,129,321 + BWI76_RS24605 0.84 -0.2 5,129,391 - BWI76_RS24605 0.89 +0.8 5,129,391 - BWI76_RS24605 0.89 -1.3 5,129,391 - BWI76_RS24605 0.89 +0.2 5,129,405 - BWI76_RS24605 0.90 -0.1 5,129,507 + -0.6 5,129,577 - +0.5 5,129,710 + +0.1 5,130,313 - BWI76_RS24610 0.42 +1.4 5,130,313 - BWI76_RS24610 0.42 +0.1 5,130,313 - BWI76_RS24610 0.42 -0.7 5,130,313 - BWI76_RS24610 0.42 +0.7 5,130,346 + BWI76_RS24610 0.44 -1.9
Or see this region's nucleotide sequence