Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17765

Experiment: 2'-Deoxyinosine 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17755 and BWI76_RS17760 are separated by 118 nucleotidesBWI76_RS17760 and BWI76_RS17765 are separated by 8 nucleotidesBWI76_RS17765 and BWI76_RS17770 are separated by 94 nucleotidesBWI76_RS17770 and BWI76_RS17775 are separated by 16 nucleotides BWI76_RS17755: BWI76_RS17755 - disulfide bond formation protein B, at 3,693,429 to 3,693,959 _RS17755 BWI76_RS17760: BWI76_RS17760 - hypothetical protein, at 3,694,078 to 3,694,422 _RS17760 BWI76_RS17765: BWI76_RS17765 - hypothetical protein, at 3,694,431 to 3,694,877 _RS17765 BWI76_RS17770: BWI76_RS17770 - isomerase/hydrolase, at 3,694,972 to 3,695,631 _RS17770 BWI76_RS17775: BWI76_RS17775 - hypothetical protein, at 3,695,648 to 3,695,929 _RS17775 Position (kb) 3694 3695Strain fitness (log2 ratio) -1 0 1at 3693.451 kb on + strandat 3693.898 kb on + strand, within BWI76_RS17755at 3694.273 kb on + strand, within BWI76_RS17760at 3694.333 kb on - strand, within BWI76_RS17760at 3694.611 kb on - strand, within BWI76_RS17765at 3694.655 kb on - strand, within BWI76_RS17765at 3694.948 kb on + strandat 3694.977 kb on + strandat 3695.186 kb on - strand, within BWI76_RS17770at 3695.420 kb on + strand, within BWI76_RS17770at 3695.614 kb on + strandat 3695.614 kb on + strandat 3695.614 kb on + strandat 3695.646 kb on - strandat 3695.668 kb on + strandat 3695.721 kb on + strand, within BWI76_RS17775at 3695.821 kb on + strand, within BWI76_RS17775

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C)
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3,693,451 + +1.2
3,693,898 + BWI76_RS17755 0.88 +0.1
3,694,273 + BWI76_RS17760 0.57 +0.2
3,694,333 - BWI76_RS17760 0.74 -0.0
3,694,611 - BWI76_RS17765 0.40 -1.2
3,694,655 - BWI76_RS17765 0.50 -1.1
3,694,948 + +0.6
3,694,977 + +0.3
3,695,186 - BWI76_RS17770 0.32 -0.4
3,695,420 + BWI76_RS17770 0.68 +0.6
3,695,614 + +0.4
3,695,614 + +0.1
3,695,614 + +0.7
3,695,646 - -0.0
3,695,668 + -0.1
3,695,721 + BWI76_RS17775 0.26 +0.7
3,695,821 + BWI76_RS17775 0.61 -0.9

Or see this region's nucleotide sequence