Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08350 and BWI76_RS08355 overlap by 7 nucleotides BWI76_RS08355 and BWI76_RS08360 overlap by 11 nucleotides BWI76_RS08360 and BWI76_RS08365 are separated by 62 nucleotides BWI76_RS08365 and BWI76_RS08370 overlap by 4 nucleotides
BWI76_RS08350: BWI76_RS08350 - carboxylase, at 1,768,073 to 1,768,729
_RS08350
BWI76_RS08355: BWI76_RS08355 - hypothetical protein, at 1,768,723 to 1,769,655
_RS08355
BWI76_RS08360: BWI76_RS08360 - LamB/YcsF family protein, at 1,769,645 to 1,770,391
_RS08360
BWI76_RS08365: BWI76_RS08365 - membrane protein, at 1,770,454 to 1,771,179
_RS08365
BWI76_RS08370: BWI76_RS08370 - membrane protein, at 1,771,176 to 1,772,171
_RS08370
Position (kb) 1769
1770
1771 Strain fitness (log2 ratio) -2
-1
0
1 at 1768.767 kb on - strand at 1768.889 kb on + strand, within BWI76_RS08355 at 1768.985 kb on - strand, within BWI76_RS08355 at 1769.103 kb on + strand, within BWI76_RS08355 at 1769.213 kb on + strand, within BWI76_RS08355 at 1769.221 kb on - strand, within BWI76_RS08355 at 1769.373 kb on - strand, within BWI76_RS08355 at 1769.610 kb on + strand at 1769.791 kb on - strand, within BWI76_RS08360 at 1770.049 kb on - strand, within BWI76_RS08360 at 1770.217 kb on - strand, within BWI76_RS08360 at 1770.298 kb on + strand, within BWI76_RS08360 at 1770.711 kb on + strand, within BWI76_RS08365 at 1771.143 kb on + strand at 1771.145 kb on - strand at 1771.151 kb on - strand at 1771.234 kb on - strand at 1771.286 kb on + strand, within BWI76_RS08370 at 1771.330 kb on + strand, within BWI76_RS08370
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 1,768,767 - -0.5 1,768,889 + BWI76_RS08355 0.18 +0.6 1,768,985 - BWI76_RS08355 0.28 -0.2 1,769,103 + BWI76_RS08355 0.41 +0.5 1,769,213 + BWI76_RS08355 0.53 -0.0 1,769,221 - BWI76_RS08355 0.53 -0.1 1,769,373 - BWI76_RS08355 0.70 +0.3 1,769,610 + +0.5 1,769,791 - BWI76_RS08360 0.20 -0.7 1,770,049 - BWI76_RS08360 0.54 -0.9 1,770,217 - BWI76_RS08360 0.77 -1.6 1,770,298 + BWI76_RS08360 0.87 +0.2 1,770,711 + BWI76_RS08365 0.35 -1.3 1,771,143 + +0.2 1,771,145 - +0.9 1,771,151 - +0.9 1,771,234 - +0.2 1,771,286 + BWI76_RS08370 0.11 -0.9 1,771,330 + BWI76_RS08370 0.15 -2.2
Or see this region's nucleotide sequence