Experiment: KB with Oxonitine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3702 and Psyr_3703 overlap by 4 nucleotides Psyr_3703 and Psyr_3704 are separated by 99 nucleotides Psyr_3704 and Psyr_3705 are separated by 6 nucleotides
Psyr_3702: Psyr_3702 - Arsenate reductase, at 4,389,992 to 4,390,345
_3702
Psyr_3703: Psyr_3703 - Flavodoxin/nitric oxide synthase, at 4,390,342 to 4,390,947
_3703
Psyr_3704: Psyr_3704 - conserved hypothetical protein, at 4,391,047 to 4,391,718
_3704
Psyr_3705: Psyr_3705 - conserved hypothetical protein, at 4,391,725 to 4,392,549
_3705
Position (kb) 4391
4392 Strain fitness (log2 ratio) -1
0
1
2 at 4390.187 kb on + strand, within Psyr_3702 at 4390.187 kb on + strand, within Psyr_3702 at 4390.187 kb on + strand, within Psyr_3702 at 4390.188 kb on - strand, within Psyr_3702 at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.354 kb on + strand at 4390.355 kb on - strand at 4390.355 kb on - strand at 4390.355 kb on - strand at 4390.355 kb on - strand at 4390.355 kb on - strand at 4390.369 kb on + strand at 4390.369 kb on + strand at 4390.370 kb on - strand at 4390.370 kb on - strand at 4390.372 kb on + strand at 4390.373 kb on - strand at 4390.522 kb on + strand, within Psyr_3703 at 4390.609 kb on + strand, within Psyr_3703 at 4390.609 kb on + strand, within Psyr_3703 at 4390.609 kb on + strand, within Psyr_3703 at 4390.610 kb on - strand, within Psyr_3703 at 4390.610 kb on - strand, within Psyr_3703 at 4390.610 kb on - strand, within Psyr_3703 at 4390.677 kb on + strand, within Psyr_3703 at 4391.056 kb on + strand at 4391.056 kb on + strand at 4391.074 kb on + strand at 4391.074 kb on + strand at 4391.178 kb on + strand, within Psyr_3704 at 4391.179 kb on - strand, within Psyr_3704 at 4391.179 kb on - strand, within Psyr_3704 at 4391.467 kb on + strand, within Psyr_3704 at 4391.467 kb on + strand, within Psyr_3704 at 4391.467 kb on + strand, within Psyr_3704 at 4391.467 kb on + strand, within Psyr_3704 at 4391.467 kb on + strand, within Psyr_3704 at 4391.467 kb on + strand, within Psyr_3704 at 4391.468 kb on - strand, within Psyr_3704 at 4391.468 kb on - strand, within Psyr_3704 at 4391.468 kb on - strand, within Psyr_3704 at 4391.468 kb on - strand, within Psyr_3704 at 4391.468 kb on - strand, within Psyr_3704 at 4391.731 kb on - strand at 4391.975 kb on + strand, within Psyr_3705 at 4391.976 kb on - strand, within Psyr_3705 at 4391.976 kb on - strand, within Psyr_3705 at 4392.002 kb on + strand, within Psyr_3705 at 4392.170 kb on + strand, within Psyr_3705 at 4392.170 kb on + strand, within Psyr_3705 at 4392.171 kb on - strand, within Psyr_3705 at 4392.171 kb on - strand, within Psyr_3705 at 4392.171 kb on - strand, within Psyr_3705 at 4392.171 kb on - strand, within Psyr_3705 at 4392.248 kb on + strand, within Psyr_3705 at 4392.248 kb on + strand, within Psyr_3705 at 4392.248 kb on + strand at 4392.249 kb on - strand, within Psyr_3705 at 4392.249 kb on - strand, within Psyr_3705 at 4392.249 kb on - strand, within Psyr_3705 at 4392.249 kb on - strand, within Psyr_3705 at 4392.297 kb on - strand, within Psyr_3705 at 4392.413 kb on + strand, within Psyr_3705 at 4392.413 kb on + strand, within Psyr_3705 at 4392.413 kb on + strand, within Psyr_3705 at 4392.413 kb on + strand, within Psyr_3705 at 4392.413 kb on + strand, within Psyr_3705 at 4392.413 kb on + strand, within Psyr_3705 at 4392.414 kb on - strand, within Psyr_3705 at 4392.414 kb on - strand, within Psyr_3705 at 4392.414 kb on - strand, within Psyr_3705 at 4392.414 kb on - strand, within Psyr_3705 at 4392.414 kb on - strand, within Psyr_3705 at 4392.414 kb on - strand, within Psyr_3705 at 4392.414 kb on - strand, within Psyr_3705 at 4392.551 kb on + strand at 4392.551 kb on + strand at 4392.552 kb on - strand at 4392.552 kb on - strand at 4392.552 kb on - strand at 4392.552 kb on - strand at 4392.552 kb on - strand at 4392.617 kb on + strand at 4392.618 kb on - strand at 4392.618 kb on - strand at 4392.621 kb on + strand at 4392.621 kb on + strand at 4392.621 kb on + strand at 4392.621 kb on + strand at 4392.621 kb on + strand at 4392.622 kb on - strand at 4392.622 kb on - strand at 4392.622 kb on - strand at 4392.622 kb on - strand at 4392.622 kb on - strand at 4392.701 kb on - strand at 4392.717 kb on - strand at 4392.717 kb on - strand at 4392.717 kb on - strand at 4392.717 kb on - strand at 4392.717 kb on - strand at 4392.717 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Oxonitine 10 mM remove 4,390,187 + Psyr_3702 0.55 +0.6 4,390,187 + Psyr_3702 0.55 -1.6 4,390,187 + Psyr_3702 0.55 +0.5 4,390,188 - Psyr_3702 0.55 +0.0 4,390,354 + -0.2 4,390,354 + +0.8 4,390,354 + +0.2 4,390,354 + -0.7 4,390,354 + -0.1 4,390,354 + +0.8 4,390,354 + +0.4 4,390,354 + +0.0 4,390,354 + -0.4 4,390,355 - -0.2 4,390,355 - -0.9 4,390,355 - +0.8 4,390,355 - +1.4 4,390,355 - -0.1 4,390,369 + -0.7 4,390,369 + +1.3 4,390,370 - -1.3 4,390,370 - -0.3 4,390,372 + +0.6 4,390,373 - -0.7 4,390,522 + Psyr_3703 0.30 -0.3 4,390,609 + Psyr_3703 0.44 -1.2 4,390,609 + Psyr_3703 0.44 -0.1 4,390,609 + Psyr_3703 0.44 -0.1 4,390,610 - Psyr_3703 0.44 -0.7 4,390,610 - Psyr_3703 0.44 -0.6 4,390,610 - Psyr_3703 0.44 -0.3 4,390,677 + Psyr_3703 0.55 -0.3 4,391,056 + -0.1 4,391,056 + +1.1 4,391,074 + +0.2 4,391,074 + +1.1 4,391,178 + Psyr_3704 0.19 +1.0 4,391,179 - Psyr_3704 0.20 +0.6 4,391,179 - Psyr_3704 0.20 +1.8 4,391,467 + Psyr_3704 0.62 +0.1 4,391,467 + Psyr_3704 0.62 +0.5 4,391,467 + Psyr_3704 0.62 +0.3 4,391,467 + Psyr_3704 0.62 +0.8 4,391,467 + Psyr_3704 0.62 -1.2 4,391,467 + Psyr_3704 0.62 +0.1 4,391,468 - Psyr_3704 0.63 +1.0 4,391,468 - Psyr_3704 0.63 -1.0 4,391,468 - Psyr_3704 0.63 +0.8 4,391,468 - Psyr_3704 0.63 +1.2 4,391,468 - Psyr_3704 0.63 +0.3 4,391,731 - +1.3 4,391,975 + Psyr_3705 0.30 +0.4 4,391,976 - Psyr_3705 0.30 -0.2 4,391,976 - Psyr_3705 0.30 +0.2 4,392,002 + Psyr_3705 0.34 +0.1 4,392,170 + Psyr_3705 0.54 +1.6 4,392,170 + Psyr_3705 0.54 -1.3 4,392,171 - Psyr_3705 0.54 -0.8 4,392,171 - Psyr_3705 0.54 +1.7 4,392,171 - Psyr_3705 0.54 -1.1 4,392,171 - Psyr_3705 0.54 -0.3 4,392,248 + Psyr_3705 0.63 +1.1 4,392,248 + Psyr_3705 0.63 +0.9 4,392,248 + +1.5 4,392,249 - Psyr_3705 0.64 -0.5 4,392,249 - Psyr_3705 0.64 -1.1 4,392,249 - Psyr_3705 0.64 -1.2 4,392,249 - Psyr_3705 0.64 -1.6 4,392,297 - Psyr_3705 0.69 +0.1 4,392,413 + Psyr_3705 0.83 +0.1 4,392,413 + Psyr_3705 0.83 +0.1 4,392,413 + Psyr_3705 0.83 +0.1 4,392,413 + Psyr_3705 0.83 -0.7 4,392,413 + Psyr_3705 0.83 -0.0 4,392,413 + Psyr_3705 0.83 -0.4 4,392,414 - Psyr_3705 0.84 +0.3 4,392,414 - Psyr_3705 0.84 -0.7 4,392,414 - Psyr_3705 0.84 +0.0 4,392,414 - Psyr_3705 0.84 -0.4 4,392,414 - Psyr_3705 0.84 +1.1 4,392,414 - Psyr_3705 0.84 +0.5 4,392,414 - Psyr_3705 0.84 -0.4 4,392,551 + -1.2 4,392,551 + -0.6 4,392,552 - +0.1 4,392,552 - -0.3 4,392,552 - -1.2 4,392,552 - -0.7 4,392,552 - -0.6 4,392,617 + +0.2 4,392,618 - +0.2 4,392,618 - +1.3 4,392,621 + +0.6 4,392,621 + +0.0 4,392,621 + +0.5 4,392,621 + +0.0 4,392,621 + +0.7 4,392,622 - -1.6 4,392,622 - +1.1 4,392,622 - -1.6 4,392,622 - -0.4 4,392,622 - +0.1 4,392,701 - -0.9 4,392,717 - -1.1 4,392,717 - +0.8 4,392,717 - -0.5 4,392,717 - +0.2 4,392,717 - -0.8 4,392,717 - +0.3
Or see this region's nucleotide sequence