Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24915 and BWI76_RS24920 overlap by 43 nucleotides BWI76_RS24920 and BWI76_RS24925 are separated by 22 nucleotides BWI76_RS24925 and BWI76_RS24930 are separated by 9 nucleotides BWI76_RS24930 and BWI76_RS24935 are separated by 207 nucleotides
BWI76_RS24915: BWI76_RS24915 - penicillin-binding protein activator, at 5,191,438 to 5,193,519
_RS24915
BWI76_RS24920: BWI76_RS24920 - YraN family protein, at 5,193,477 to 5,193,863
_RS24920
BWI76_RS24925: BWI76_RS24925 - DnaA initiator-associating protein DiaA, at 5,193,886 to 5,194,476
_RS24925
BWI76_RS24930: BWI76_RS24930 - osmotically-inducible protein OsmY, at 5,194,486 to 5,195,061
_RS24930
BWI76_RS24935: BWI76_RS24935 - hypothetical protein, at 5,195,269 to 5,196,309
_RS24935
Position (kb)
5193
5194
5195 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5193.028 kb on + strand, within BWI76_RS24915 at 5193.028 kb on + strand, within BWI76_RS24915 at 5193.028 kb on + strand, within BWI76_RS24915 at 5193.036 kb on - strand, within BWI76_RS24915 at 5193.040 kb on + strand, within BWI76_RS24915 at 5193.040 kb on + strand, within BWI76_RS24915 at 5193.041 kb on - strand, within BWI76_RS24915 at 5193.048 kb on - strand, within BWI76_RS24915 at 5193.158 kb on - strand, within BWI76_RS24915 at 5193.170 kb on + strand, within BWI76_RS24915 at 5193.170 kb on + strand, within BWI76_RS24915 at 5193.172 kb on + strand, within BWI76_RS24915 at 5193.207 kb on - strand, within BWI76_RS24915 at 5193.323 kb on + strand at 5193.408 kb on - strand at 5193.412 kb on + strand at 5193.445 kb on + strand at 5193.636 kb on + strand, within BWI76_RS24920 at 5193.745 kb on - strand, within BWI76_RS24920 at 5193.807 kb on + strand, within BWI76_RS24920 at 5194.007 kb on - strand, within BWI76_RS24925 at 5194.186 kb on + strand, within BWI76_RS24925 at 5194.314 kb on - strand, within BWI76_RS24925 at 5194.493 kb on - strand at 5194.610 kb on + strand, within BWI76_RS24930 at 5194.610 kb on + strand, within BWI76_RS24930 at 5194.722 kb on - strand, within BWI76_RS24930 at 5194.745 kb on - strand, within BWI76_RS24930 at 5194.847 kb on - strand, within BWI76_RS24930 at 5194.878 kb on + strand, within BWI76_RS24930 at 5194.901 kb on - strand, within BWI76_RS24930 at 5194.953 kb on + strand, within BWI76_RS24930 at 5194.961 kb on - strand, within BWI76_RS24930 at 5195.081 kb on + strand at 5195.393 kb on - strand, within BWI76_RS24935
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 5,193,028 + BWI76_RS24915 0.76 -2.8 5,193,028 + BWI76_RS24915 0.76 +0.7 5,193,028 + BWI76_RS24915 0.76 +1.2 5,193,036 - BWI76_RS24915 0.77 +0.2 5,193,040 + BWI76_RS24915 0.77 -0.3 5,193,040 + BWI76_RS24915 0.77 +1.7 5,193,041 - BWI76_RS24915 0.77 +0.2 5,193,048 - BWI76_RS24915 0.77 +0.6 5,193,158 - BWI76_RS24915 0.83 -0.2 5,193,170 + BWI76_RS24915 0.83 +0.2 5,193,170 + BWI76_RS24915 0.83 +0.2 5,193,172 + BWI76_RS24915 0.83 +0.4 5,193,207 - BWI76_RS24915 0.85 -0.4 5,193,323 + +0.4 5,193,408 - +3.6 5,193,412 + +1.1 5,193,445 + -0.8 5,193,636 + BWI76_RS24920 0.41 -0.8 5,193,745 - BWI76_RS24920 0.69 +2.0 5,193,807 + BWI76_RS24920 0.85 -0.9 5,194,007 - BWI76_RS24925 0.20 -0.4 5,194,186 + BWI76_RS24925 0.51 +0.6 5,194,314 - BWI76_RS24925 0.72 +2.2 5,194,493 - +1.1 5,194,610 + BWI76_RS24930 0.22 +0.0 5,194,610 + BWI76_RS24930 0.22 -0.0 5,194,722 - BWI76_RS24930 0.41 -1.1 5,194,745 - BWI76_RS24930 0.45 -1.7 5,194,847 - BWI76_RS24930 0.63 -1.2 5,194,878 + BWI76_RS24930 0.68 +0.0 5,194,901 - BWI76_RS24930 0.72 -0.1 5,194,953 + BWI76_RS24930 0.81 -1.4 5,194,961 - BWI76_RS24930 0.82 -0.4 5,195,081 + -0.7 5,195,393 - BWI76_RS24935 0.12 -0.2
Or see this region's nucleotide sequence