Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24170

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24165 and BWI76_RS24170 are separated by 193 nucleotidesBWI76_RS24170 and BWI76_RS24175 are separated by 67 nucleotides BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434 _RS24165 BWI76_RS24170: BWI76_RS24170 - nucleoside permease, at 5,038,628 to 5,039,884 _RS24170 BWI76_RS24175: BWI76_RS24175 - ornithine decarboxylase, at 5,039,952 to 5,042,090 _RS24175 Position (kb) 5038 5039 5040Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 5037.697 kb on - strandat 5037.698 kb on - strand, within BWI76_RS24165at 5037.884 kb on + strand, within BWI76_RS24165at 5037.884 kb on + strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5038.068 kb on + strand, within BWI76_RS24165at 5038.076 kb on - strand, within BWI76_RS24165at 5038.190 kb on + strand, within BWI76_RS24165at 5038.198 kb on - strand, within BWI76_RS24165at 5038.222 kb on - strand, within BWI76_RS24165at 5038.296 kb on + strand, within BWI76_RS24165at 5038.373 kb on - strandat 5038.400 kb on - strandat 5038.406 kb on - strandat 5038.486 kb on + strandat 5038.486 kb on + strandat 5038.730 kb on - strandat 5038.754 kb on + strand, within BWI76_RS24170at 5038.764 kb on - strand, within BWI76_RS24170at 5038.963 kb on + strand, within BWI76_RS24170at 5038.971 kb on - strand, within BWI76_RS24170at 5039.060 kb on - strand, within BWI76_RS24170at 5039.110 kb on + strand, within BWI76_RS24170at 5039.133 kb on + strand, within BWI76_RS24170at 5039.139 kb on - strand, within BWI76_RS24170at 5039.141 kb on - strand, within BWI76_RS24170at 5039.141 kb on - strand, within BWI76_RS24170at 5039.154 kb on + strand, within BWI76_RS24170at 5039.162 kb on - strand, within BWI76_RS24170at 5039.162 kb on - strand, within BWI76_RS24170at 5039.490 kb on - strand, within BWI76_RS24170at 5039.566 kb on + strand, within BWI76_RS24170at 5039.576 kb on + strandat 5039.830 kb on + strandat 5039.838 kb on - strandat 5039.865 kb on - strandat 5039.970 kb on + strandat 5039.970 kb on + strandat 5039.981 kb on + strandat 5040.016 kb on + strandat 5040.301 kb on - strand, within BWI76_RS24175at 5040.313 kb on - strand, within BWI76_RS24175at 5040.675 kb on - strand, within BWI76_RS24175at 5040.676 kb on - strand, within BWI76_RS24175at 5040.703 kb on - strand, within BWI76_RS24175at 5040.857 kb on + strand, within BWI76_RS24175

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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5,037,697 - -1.2
5,037,698 - BWI76_RS24165 0.32 -0.9
5,037,884 + BWI76_RS24165 0.49 +1.4
5,037,884 + BWI76_RS24165 0.49 +0.0
5,037,892 - BWI76_RS24165 0.50 +1.1
5,037,892 - BWI76_RS24165 0.50 +3.3
5,037,892 - BWI76_RS24165 0.50 -2.2
5,037,892 - BWI76_RS24165 0.50 -0.1
5,037,892 - BWI76_RS24165 0.50 +0.7
5,038,068 + BWI76_RS24165 0.66 +0.1
5,038,076 - BWI76_RS24165 0.67 +0.0
5,038,190 + BWI76_RS24165 0.77 +0.8
5,038,198 - BWI76_RS24165 0.78 -0.3
5,038,222 - BWI76_RS24165 0.80 -0.9
5,038,296 + BWI76_RS24165 0.87 -0.2
5,038,373 - -0.0
5,038,400 - +0.1
5,038,406 - +0.4
5,038,486 + -1.2
5,038,486 + -0.7
5,038,730 - +1.5
5,038,754 + BWI76_RS24170 0.10 +0.8
5,038,764 - BWI76_RS24170 0.11 +1.0
5,038,963 + BWI76_RS24170 0.27 +1.5
5,038,971 - BWI76_RS24170 0.27 -2.8
5,039,060 - BWI76_RS24170 0.34 +1.6
5,039,110 + BWI76_RS24170 0.38 +1.0
5,039,133 + BWI76_RS24170 0.40 +1.0
5,039,139 - BWI76_RS24170 0.41 +0.5
5,039,141 - BWI76_RS24170 0.41 +0.1
5,039,141 - BWI76_RS24170 0.41 -0.7
5,039,154 + BWI76_RS24170 0.42 +2.0
5,039,162 - BWI76_RS24170 0.42 +1.3
5,039,162 - BWI76_RS24170 0.42 +2.0
5,039,490 - BWI76_RS24170 0.69 +2.2
5,039,566 + BWI76_RS24170 0.75 +1.2
5,039,576 + +0.1
5,039,830 + +0.9
5,039,838 - -0.5
5,039,865 - +1.6
5,039,970 + +0.1
5,039,970 + +0.2
5,039,981 + -0.7
5,040,016 + +0.1
5,040,301 - BWI76_RS24175 0.16 -0.1
5,040,313 - BWI76_RS24175 0.17 +1.0
5,040,675 - BWI76_RS24175 0.34 -0.3
5,040,676 - BWI76_RS24175 0.34 -0.5
5,040,703 - BWI76_RS24175 0.35 -0.1
5,040,857 + BWI76_RS24175 0.42 -1.1

Or see this region's nucleotide sequence