Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23660 and BWI76_RS23665 are separated by 53 nucleotides BWI76_RS23665 and BWI76_RS23670 are separated by 363 nucleotides
BWI76_RS23660: BWI76_RS23660 - pentose kinase, at 4,937,909 to 4,939,414
_RS23660
BWI76_RS23665: BWI76_RS23665 - 2-deoxyribose-5-phosphate aldolase, at 4,939,468 to 4,940,217
_RS23665
BWI76_RS23670: BWI76_RS23670 - alkaline phosphatase, at 4,940,581 to 4,941,381
_RS23670
Position (kb)
4939
4940
4941 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4938.529 kb on + strand, within BWI76_RS23660 at 4938.669 kb on - strand, within BWI76_RS23660 at 4938.781 kb on + strand, within BWI76_RS23660 at 4939.262 kb on + strand, within BWI76_RS23660 at 4939.279 kb on + strand at 4939.279 kb on + strand at 4939.287 kb on - strand at 4939.287 kb on - strand at 4939.828 kb on + strand, within BWI76_RS23665 at 4939.857 kb on - strand, within BWI76_RS23665 at 4939.879 kb on + strand, within BWI76_RS23665 at 4940.000 kb on + strand, within BWI76_RS23665 at 4940.042 kb on + strand, within BWI76_RS23665 at 4940.088 kb on + strand, within BWI76_RS23665 at 4940.093 kb on + strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.133 kb on - strand, within BWI76_RS23665 at 4940.331 kb on - strand at 4940.466 kb on - strand at 4940.473 kb on + strand at 4940.566 kb on + strand at 4940.566 kb on + strand at 4940.571 kb on + strand at 4940.576 kb on + strand at 4940.579 kb on - strand at 4940.623 kb on + strand at 4941.022 kb on - strand, within BWI76_RS23670 at 4941.207 kb on - strand, within BWI76_RS23670
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 4,938,529 + BWI76_RS23660 0.41 -0.0 4,938,669 - BWI76_RS23660 0.50 -0.3 4,938,781 + BWI76_RS23660 0.58 -0.2 4,939,262 + BWI76_RS23660 0.90 +0.5 4,939,279 + +0.6 4,939,279 + +3.1 4,939,287 - +0.1 4,939,287 - -0.9 4,939,828 + BWI76_RS23665 0.48 -0.4 4,939,857 - BWI76_RS23665 0.52 -1.7 4,939,879 + BWI76_RS23665 0.55 -0.2 4,940,000 + BWI76_RS23665 0.71 -0.2 4,940,042 + BWI76_RS23665 0.77 +0.3 4,940,088 + BWI76_RS23665 0.83 +0.1 4,940,093 + BWI76_RS23665 0.83 -1.0 4,940,133 - BWI76_RS23665 0.89 +0.1 4,940,133 - BWI76_RS23665 0.89 +0.9 4,940,331 - +0.5 4,940,466 - +0.0 4,940,473 + +1.0 4,940,566 + +0.7 4,940,566 + +0.7 4,940,571 + -0.1 4,940,576 + -1.0 4,940,579 - +1.7 4,940,623 + -1.1 4,941,022 - BWI76_RS23670 0.55 -0.2 4,941,207 - BWI76_RS23670 0.78 +0.6
Or see this region's nucleotide sequence