Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22810

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22805 and BWI76_RS22810 are separated by 97 nucleotidesBWI76_RS22810 and BWI76_RS22815 are separated by 124 nucleotides BWI76_RS22805: BWI76_RS22805 - GTP diphosphokinase, at 4,754,751 to 4,756,988 _RS22805 BWI76_RS22810: BWI76_RS22810 - 23S rRNA (uracil(1939)-C(5))-methyltransferase, at 4,757,086 to 4,758,429 _RS22810 BWI76_RS22815: BWI76_RS22815 - hybrid sensor histidine kinase/response regulator, at 4,758,554 to 4,761,307 _RS22815 Position (kb) 4757 4758 4759Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4756.100 kb on + strand, within BWI76_RS22805at 4756.264 kb on + strand, within BWI76_RS22805at 4756.303 kb on + strand, within BWI76_RS22805at 4756.410 kb on - strand, within BWI76_RS22805at 4756.531 kb on + strand, within BWI76_RS22805at 4756.598 kb on + strand, within BWI76_RS22805at 4756.598 kb on + strand, within BWI76_RS22805at 4756.606 kb on - strand, within BWI76_RS22805at 4756.661 kb on - strand, within BWI76_RS22805at 4756.663 kb on + strand, within BWI76_RS22805at 4756.746 kb on - strand, within BWI76_RS22805at 4756.775 kb on - strandat 4756.997 kb on + strandat 4756.997 kb on + strandat 4756.997 kb on + strandat 4757.003 kb on - strandat 4757.005 kb on - strandat 4757.005 kb on - strandat 4757.005 kb on - strandat 4757.005 kb on - strandat 4757.042 kb on + strandat 4757.042 kb on - strandat 4757.531 kb on + strand, within BWI76_RS22810at 4757.637 kb on + strand, within BWI76_RS22810at 4757.673 kb on + strand, within BWI76_RS22810at 4757.689 kb on + strand, within BWI76_RS22810at 4757.945 kb on - strand, within BWI76_RS22810at 4758.076 kb on - strand, within BWI76_RS22810at 4758.227 kb on + strand, within BWI76_RS22810at 4758.227 kb on + strand, within BWI76_RS22810at 4758.227 kb on + strand, within BWI76_RS22810at 4758.235 kb on - strand, within BWI76_RS22810at 4758.377 kb on + strandat 4758.377 kb on + strandat 4758.444 kb on - strandat 4758.490 kb on - strandat 4758.490 kb on - strandat 4758.520 kb on - strandat 4758.561 kb on + strandat 4758.569 kb on - strandat 4758.608 kb on + strandat 4758.672 kb on + strandat 4758.704 kb on - strandat 4758.891 kb on - strand, within BWI76_RS22815at 4758.959 kb on - strand, within BWI76_RS22815at 4759.116 kb on - strand, within BWI76_RS22815at 4759.214 kb on + strand, within BWI76_RS22815at 4759.234 kb on - strand, within BWI76_RS22815

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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4,756,100 + BWI76_RS22805 0.60 +1.6
4,756,264 + BWI76_RS22805 0.68 +0.8
4,756,303 + BWI76_RS22805 0.69 +1.3
4,756,410 - BWI76_RS22805 0.74 +0.6
4,756,531 + BWI76_RS22805 0.80 +1.2
4,756,598 + BWI76_RS22805 0.83 +0.5
4,756,598 + BWI76_RS22805 0.83 +3.3
4,756,606 - BWI76_RS22805 0.83 -0.2
4,756,661 - BWI76_RS22805 0.85 +2.2
4,756,663 + BWI76_RS22805 0.85 -0.5
4,756,746 - BWI76_RS22805 0.89 +1.1
4,756,775 - +0.9
4,756,997 + -1.3
4,756,997 + +0.7
4,756,997 + +1.5
4,757,003 - +0.1
4,757,005 - -1.7
4,757,005 - -0.9
4,757,005 - +0.8
4,757,005 - -0.2
4,757,042 + +0.1
4,757,042 - +0.2
4,757,531 + BWI76_RS22810 0.33 -1.7
4,757,637 + BWI76_RS22810 0.41 +0.8
4,757,673 + BWI76_RS22810 0.44 +1.4
4,757,689 + BWI76_RS22810 0.45 +1.9
4,757,945 - BWI76_RS22810 0.64 +0.5
4,758,076 - BWI76_RS22810 0.74 -0.5
4,758,227 + BWI76_RS22810 0.85 +0.6
4,758,227 + BWI76_RS22810 0.85 +1.5
4,758,227 + BWI76_RS22810 0.85 -0.1
4,758,235 - BWI76_RS22810 0.85 +1.6
4,758,377 + +1.4
4,758,377 + +0.6
4,758,444 - +0.4
4,758,490 - +0.1
4,758,490 - -1.9
4,758,520 - +0.2
4,758,561 + -0.7
4,758,569 - +0.2
4,758,608 + +2.3
4,758,672 + +1.4
4,758,704 - +0.3
4,758,891 - BWI76_RS22815 0.12 +0.4
4,758,959 - BWI76_RS22815 0.15 -0.9
4,759,116 - BWI76_RS22815 0.20 -1.9
4,759,214 + BWI76_RS22815 0.24 -3.3
4,759,234 - BWI76_RS22815 0.25 +0.4

Or see this region's nucleotide sequence