Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21985 and BWI76_RS21990 are separated by 250 nucleotides BWI76_RS21990 and BWI76_RS21995 are separated by 149 nucleotides BWI76_RS21995 and BWI76_RS22000 are separated by 9 nucleotides
BWI76_RS21985: BWI76_RS21985 - acetaldehyde dehydrogenase (EC 1.2.1.3) <small>(from data)</small>, at 4,592,938 to 4,594,458
_RS21985
BWI76_RS21990: BWI76_RS21990 - ATPase AAA, at 4,594,709 to 4,596,493
_RS21990
BWI76_RS21995: BWI76_RS21995 - transcriptional regulator, at 4,596,643 to 4,596,942
_RS21995
BWI76_RS22000: BWI76_RS22000 - hypothetical protein, at 4,596,952 to 4,597,473
_RS22000
Position (kb) 4594
4595
4596
4597 Strain fitness (log2 ratio) -1
0
1
2 at 4593.709 kb on + strand, within BWI76_RS21985 at 4593.709 kb on + strand, within BWI76_RS21985 at 4593.717 kb on - strand, within BWI76_RS21985 at 4593.717 kb on - strand, within BWI76_RS21985 at 4593.805 kb on + strand, within BWI76_RS21985 at 4593.864 kb on + strand, within BWI76_RS21985 at 4593.872 kb on - strand, within BWI76_RS21985 at 4594.120 kb on - strand, within BWI76_RS21985 at 4594.405 kb on + strand at 4594.411 kb on + strand at 4594.443 kb on + strand at 4594.456 kb on - strand at 4594.505 kb on + strand at 4594.712 kb on - strand at 4595.245 kb on + strand, within BWI76_RS21990 at 4595.253 kb on - strand, within BWI76_RS21990 at 4595.288 kb on - strand, within BWI76_RS21990 at 4595.430 kb on + strand, within BWI76_RS21990 at 4595.604 kb on + strand at 4595.649 kb on - strand, within BWI76_RS21990 at 4595.693 kb on + strand, within BWI76_RS21990 at 4595.758 kb on - strand, within BWI76_RS21990 at 4595.824 kb on - strand, within BWI76_RS21990 at 4595.831 kb on + strand, within BWI76_RS21990 at 4595.942 kb on - strand, within BWI76_RS21990 at 4596.059 kb on + strand, within BWI76_RS21990 at 4596.086 kb on + strand, within BWI76_RS21990 at 4596.205 kb on - strand, within BWI76_RS21990 at 4596.225 kb on - strand, within BWI76_RS21990 at 4596.362 kb on - strand at 4596.438 kb on - strand at 4596.453 kb on + strand at 4596.585 kb on - strand at 4596.666 kb on + strand at 4596.708 kb on - strand, within BWI76_RS21995 at 4596.787 kb on + strand, within BWI76_RS21995 at 4596.857 kb on + strand, within BWI76_RS21995 at 4596.944 kb on - strand at 4596.956 kb on - strand at 4597.115 kb on + strand, within BWI76_RS22000 at 4597.164 kb on + strand, within BWI76_RS22000 at 4597.164 kb on + strand, within BWI76_RS22000 at 4597.164 kb on + strand, within BWI76_RS22000 at 4597.172 kb on - strand, within BWI76_RS22000 at 4597.172 kb on - strand, within BWI76_RS22000 at 4597.318 kb on + strand, within BWI76_RS22000 at 4597.339 kb on + strand, within BWI76_RS22000 at 4597.404 kb on - strand, within BWI76_RS22000 at 4597.475 kb on - strand at 4597.475 kb on - strand at 4597.493 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 4,593,709 + BWI76_RS21985 0.51 +0.3 4,593,709 + BWI76_RS21985 0.51 +0.6 4,593,717 - BWI76_RS21985 0.51 -0.5 4,593,717 - BWI76_RS21985 0.51 +0.0 4,593,805 + BWI76_RS21985 0.57 +0.7 4,593,864 + BWI76_RS21985 0.61 +0.9 4,593,872 - BWI76_RS21985 0.61 -1.2 4,594,120 - BWI76_RS21985 0.78 -0.4 4,594,405 + +0.5 4,594,411 + +0.7 4,594,443 + +0.1 4,594,456 - +1.0 4,594,505 + +0.5 4,594,712 - +0.7 4,595,245 + BWI76_RS21990 0.30 +0.3 4,595,253 - BWI76_RS21990 0.30 +1.9 4,595,288 - BWI76_RS21990 0.32 +0.7 4,595,430 + BWI76_RS21990 0.40 -1.5 4,595,604 + +1.0 4,595,649 - BWI76_RS21990 0.53 +1.4 4,595,693 + BWI76_RS21990 0.55 -0.1 4,595,758 - BWI76_RS21990 0.59 +1.0 4,595,824 - BWI76_RS21990 0.62 +0.9 4,595,831 + BWI76_RS21990 0.63 +1.1 4,595,942 - BWI76_RS21990 0.69 -0.5 4,596,059 + BWI76_RS21990 0.76 -0.4 4,596,086 + BWI76_RS21990 0.77 +1.1 4,596,205 - BWI76_RS21990 0.84 +0.8 4,596,225 - BWI76_RS21990 0.85 +0.7 4,596,362 - +0.7 4,596,438 - -0.7 4,596,453 + +0.6 4,596,585 - -0.3 4,596,666 + -0.5 4,596,708 - BWI76_RS21995 0.22 +0.5 4,596,787 + BWI76_RS21995 0.48 -0.8 4,596,857 + BWI76_RS21995 0.71 -0.1 4,596,944 - -1.1 4,596,956 - +0.4 4,597,115 + BWI76_RS22000 0.31 +1.9 4,597,164 + BWI76_RS22000 0.41 +0.4 4,597,164 + BWI76_RS22000 0.41 -1.2 4,597,164 + BWI76_RS22000 0.41 -0.2 4,597,172 - BWI76_RS22000 0.42 -0.1 4,597,172 - BWI76_RS22000 0.42 +0.0 4,597,318 + BWI76_RS22000 0.70 -1.0 4,597,339 + BWI76_RS22000 0.74 -0.4 4,597,404 - BWI76_RS22000 0.87 +0.4 4,597,475 - -0.0 4,597,475 - +0.9 4,597,493 + +0.7
Or see this region's nucleotide sequence