Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21900 and BWI76_RS21905 are separated by 0 nucleotides BWI76_RS21905 and BWI76_RS21910 are separated by 5 nucleotides BWI76_RS21910 and BWI76_RS21915 are separated by 74 nucleotides BWI76_RS21915 and BWI76_RS21920 are separated by 6 nucleotides
BWI76_RS21900: BWI76_RS21900 - amino acid ABC transporter permease/ATP-binding protein, at 4,576,005 to 4,577,525
_RS21900
BWI76_RS21905: BWI76_RS21905 - class II aldolase, at 4,577,526 to 4,578,254
_RS21905
BWI76_RS21910: BWI76_RS21910 - glyoxylate/hydroxypyruvate reductase A, at 4,578,260 to 4,579,192
_RS21910
BWI76_RS21915: BWI76_RS21915 - short-chain dehydrogenase/reductase SDR, at 4,579,267 to 4,580,061
_RS21915
BWI76_RS21920: BWI76_RS21920 - amino acid ABC transporter substrate-binding protein, at 4,580,068 to 4,580,284
_RS21920
Position (kb) 4578
4579
4580 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4577.449 kb on - strand at 4577.723 kb on + strand, within BWI76_RS21905 at 4577.733 kb on + strand, within BWI76_RS21905 at 4577.741 kb on - strand, within BWI76_RS21905 at 4578.165 kb on - strand, within BWI76_RS21905 at 4578.167 kb on + strand, within BWI76_RS21905 at 4578.230 kb on + strand at 4578.296 kb on + strand at 4578.304 kb on - strand at 4578.342 kb on - strand at 4578.700 kb on + strand, within BWI76_RS21910 at 4578.843 kb on - strand, within BWI76_RS21910 at 4578.855 kb on - strand, within BWI76_RS21910 at 4579.229 kb on + strand at 4579.405 kb on + strand, within BWI76_RS21915 at 4579.405 kb on + strand, within BWI76_RS21915 at 4579.660 kb on + strand, within BWI76_RS21915 at 4579.683 kb on - strand, within BWI76_RS21915 at 4579.991 kb on + strand at 4580.000 kb on + strand at 4580.073 kb on + strand at 4580.143 kb on - strand, within BWI76_RS21920 at 4580.145 kb on - strand, within BWI76_RS21920 at 4580.152 kb on + strand, within BWI76_RS21920 at 4580.152 kb on + strand, within BWI76_RS21920
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 4,577,449 - +0.1 4,577,723 + BWI76_RS21905 0.27 +0.7 4,577,733 + BWI76_RS21905 0.28 -0.2 4,577,741 - BWI76_RS21905 0.29 +0.2 4,578,165 - BWI76_RS21905 0.88 +0.9 4,578,167 + BWI76_RS21905 0.88 +0.3 4,578,230 + -0.5 4,578,296 + -0.1 4,578,304 - +0.8 4,578,342 - -0.1 4,578,700 + BWI76_RS21910 0.47 -0.9 4,578,843 - BWI76_RS21910 0.62 -3.3 4,578,855 - BWI76_RS21910 0.64 -0.8 4,579,229 + +0.7 4,579,405 + BWI76_RS21915 0.17 -0.0 4,579,405 + BWI76_RS21915 0.17 +0.1 4,579,660 + BWI76_RS21915 0.49 -0.5 4,579,683 - BWI76_RS21915 0.52 +0.0 4,579,991 + +1.1 4,580,000 + -0.4 4,580,073 + -0.0 4,580,143 - BWI76_RS21920 0.35 +0.0 4,580,145 - BWI76_RS21920 0.35 +0.9 4,580,152 + BWI76_RS21920 0.39 -0.5 4,580,152 + BWI76_RS21920 0.39 +0.9
Or see this region's nucleotide sequence