Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19510 and BWI76_RS19515 are separated by 194 nucleotides BWI76_RS19515 and BWI76_RS19520 are separated by 97 nucleotides BWI76_RS19520 and BWI76_RS19525 are separated by 138 nucleotides
BWI76_RS19510: BWI76_RS19510 - beta-glucosidase, at 4,076,273 to 4,078,570
_RS19510
BWI76_RS19515: BWI76_RS19515 - D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) , at 4,078,765 to 4,080,507
_RS19515
BWI76_RS19520: BWI76_RS19520 - acetyltransferase GCN5, at 4,080,605 to 4,081,159
_RS19520
BWI76_RS19525: BWI76_RS19525 - D-alanyl-D-alanine endopeptidase, at 4,081,298 to 4,082,245
_RS19525
Position (kb)
4078
4079
4080
4081 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4077.902 kb on + strand, within BWI76_RS19510 at 4077.954 kb on - strand, within BWI76_RS19510 at 4077.990 kb on - strand, within BWI76_RS19510 at 4078.195 kb on + strand, within BWI76_RS19510 at 4078.289 kb on + strand, within BWI76_RS19510 at 4078.348 kb on - strand at 4078.804 kb on + strand at 4078.893 kb on - strand at 4078.934 kb on - strand at 4079.032 kb on + strand, within BWI76_RS19515 at 4079.114 kb on - strand, within BWI76_RS19515 at 4079.978 kb on - strand, within BWI76_RS19515 at 4080.137 kb on + strand, within BWI76_RS19515 at 4080.177 kb on + strand, within BWI76_RS19515 at 4080.333 kb on + strand at 4080.371 kb on - strand at 4080.419 kb on + strand at 4080.523 kb on + strand at 4080.542 kb on + strand at 4080.550 kb on - strand at 4080.699 kb on - strand, within BWI76_RS19520 at 4080.728 kb on - strand, within BWI76_RS19520 at 4080.884 kb on - strand, within BWI76_RS19520
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 4,077,902 + BWI76_RS19510 0.71 -0.3 4,077,954 - BWI76_RS19510 0.73 -0.5 4,077,990 - BWI76_RS19510 0.75 -0.3 4,078,195 + BWI76_RS19510 0.84 -0.9 4,078,289 + BWI76_RS19510 0.88 -0.5 4,078,348 - +0.0 4,078,804 + +0.2 4,078,893 - +3.6 4,078,934 - -0.3 4,079,032 + BWI76_RS19515 0.15 +1.5 4,079,114 - BWI76_RS19515 0.20 +1.0 4,079,978 - BWI76_RS19515 0.70 +0.6 4,080,137 + BWI76_RS19515 0.79 +1.3 4,080,177 + BWI76_RS19515 0.81 +1.0 4,080,333 + -0.3 4,080,371 - -0.8 4,080,419 + +0.3 4,080,523 + +1.3 4,080,542 + +2.6 4,080,550 - +0.2 4,080,699 - BWI76_RS19520 0.17 +0.6 4,080,728 - BWI76_RS19520 0.22 -0.5 4,080,884 - BWI76_RS19520 0.50 -0.8
Or see this region's nucleotide sequence